Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_660341 17 2528 NP_055323 17 2528 XP_005261394 17 2528 XP_005261392 17 2528 NP_689639 17 2528 NP_001020029 17 4312 NP_057013 17 4312 NP_660199 17 4312 NP_660198 17 4312 NP_000338 17 4312 NP_001191759 17 4312 XP_006720304 17 4312 XP_005268080 17 4312 NP_660200 17 4312 NP_060636 16 5631 NP_001137139 16 5631 NP_067034 16 5631 XP_005271055 16 5631 NP_006466 15 9605 NP_000799 15 9605 NP_000798 15 9605 NP_001107647 15 9605 NP_000801 15 9605 NP_001273385 15 9605 XP_006724874 15 9605 XP_005274716 15 9605 XP_005268315 15 9605 XP_006720522 15 9605 XP_005266289 15 9605 XP_005266288 15 9605 XP_006716762 15 9605 XP_006716760 15 9605 XP_006716759 15 9605 XP_006716757 15 9605 XP_005251165 15 9605 XP_005251164 15 9605 XP_005251163 15 9605 XP_006716755 15 9605 XP_006716754 15 9605 XP_006716753 15 9605 XP_005249342 15 9605 XP_006714065 15 9605 NP_056297 15 9605 NP_001158509 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VNVTVFTSK 9 VNVT FTSK Sbjct: 1518 VNVTAFTSK 1526>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VNVTVFTSK 9 VNVT FTSK Sbjct: 1313 VNVTAFTSK 1321>NP_660341 Length = 373 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VNVTVFTSK 9 VN+T+FT++ Sbjct: 297 VNLTIFTAR 305>NP_055323 Length = 190 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VNVTVFTSK 9 VN+T+FT++ Sbjct: 114 VNLTIFTAR 122>XP_005261394 Length = 202 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VNVTVFTSK 9 VN+T+FT++ Sbjct: 126 VNLTIFTAR 134>XP_005261392 Length = 217 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VNVTVFTSK 9 VN+T+FT++ Sbjct: 114 VNLTIFTAR 122>NP_689639 Length = 386 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VNVTVFTSK 9 VN+T+FT++ Sbjct: 310 VNLTIFTAR 318>NP_001020029 Length = 2328 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VNVTVFTS 8 VNVT FTS Sbjct: 193 VNVTNFTS 200>NP_057013 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNVTVFTSK 9 +N+T FT+K Sbjct: 113 INLTFFTTK 121>NP_660199 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNVTVFTSK 9 +N+T FT+K Sbjct: 113 INLTFFTTK 121>NP_660198 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNVTVFTSK 9 +N+T FT+K Sbjct: 113 INLTFFTTK 121>NP_000338 Length = 2137 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VNVTVFTS 8 VNVT FTS Sbjct: 193 VNVTNFTS 200>NP_001191759 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNVTVFTSK 9 +N+T FT+K Sbjct: 113 INLTFFTTK 121>XP_006720304 Length = 2328 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VNVTVFTS 8 VNVT FTS Sbjct: 193 VNVTNFTS 200>XP_005268080 Length = 2328 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VNVTVFTS 8 VNVT FTS Sbjct: 193 VNVTNFTS 200>NP_660200 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNVTVFTSK 9 +N+T FT+K Sbjct: 113 INLTFFTTK 121>NP_060636 Length = 165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNVTVFTS 8 +NV VFTS Sbjct: 108 LNVNVFTS 115>NP_001137139 Length = 693 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NVTVFT 7 NVTVFT Sbjct: 495 NVTVFT 500>NP_067034 Length = 693 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NVTVFT 7 NVTVFT Sbjct: 495 NVTVFT 500>XP_005271055 Length = 165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNVTVFTS 8 +NV VFTS Sbjct: 108 LNVNVFTS 115>NP_006466 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNVTVFTSK 9 + VTV+T+K Sbjct: 664 IPVTVYTTK 672>NP_000799 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NVTVFT 7 N+T+FT Sbjct: 63 NITIFT 68>NP_000798 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NVTVFT 7 N+T+FT Sbjct: 38 NITIFT 43>NP_001107647 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NVTVFT 7 N+T+FT Sbjct: 38 NITIFT 43>NP_000801 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NVTVFT 7 N+T+FT Sbjct: 45 NITIFT 50>NP_001273385 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VNVTVFTS 8 VNVT+F++ Sbjct: 278 VNVTMFST 285>XP_006724874 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NVTVFT 7 N+T+FT Sbjct: 63 NITIFT 68>XP_005274716 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NVTVFT 7 N+T+FT Sbjct: 63 NITIFT 68>XP_005268315 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NVTVFT 7 N+T+FT Sbjct: 45 NITIFT 50>XP_006720522 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NVTVFT 7 N+T+FT Sbjct: 45 NITIFT 50>XP_005266289 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNVTVFTSK 9 + VTV+T+K Sbjct: 664 IPVTVYTTK 672>XP_005266288 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNVTVFTSK 9 + VTV+T+K Sbjct: 664 IPVTVYTTK 672>XP_006716762 Length = 1571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTVFTSK 9 ++VFTSK Sbjct: 1252 ISVFTSK 1258>XP_006716760 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTVFTSK 9 ++VFTSK Sbjct: 109 ISVFTSK 115>XP_006716759 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTVFTSK 9 ++VFTSK Sbjct: 125 ISVFTSK 131>XP_006716757 Length = 1356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTVFTSK 9 ++VFTSK Sbjct: 1037 ISVFTSK 1043>XP_005251165 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTVFTSK 9 ++VFTSK Sbjct: 1213 ISVFTSK 1219>XP_005251164 Length = 1552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTVFTSK 9 ++VFTSK Sbjct: 1233 ISVFTSK 1239>XP_005251163 Length = 1574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTVFTSK 9 ++VFTSK Sbjct: 1255 ISVFTSK 1261>XP_006716755 Length = 1634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTVFTSK 9 ++VFTSK Sbjct: 1315 ISVFTSK 1321>XP_006716754 Length = 1655 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTVFTSK 9 ++VFTSK Sbjct: 1336 ISVFTSK 1342>XP_006716753 Length = 1656 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTVFTSK 9 ++VFTSK Sbjct: 1337 ISVFTSK 1343>XP_005249342 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VNVTVFTS 8 VNVT+F++ Sbjct: 278 VNVTMFST 285>XP_006714065 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NVTVFT 7 N+T+FT Sbjct: 38 NITIFT 43>NP_056297 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VNVTVFTS 8 VNVT+F++ Sbjct: 278 VNVTMFST 285>NP_001158509 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NVTVFT 7 N+T+FT Sbjct: 45 NITIFT 50Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.123 0.310 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 328,131 Number of extensions: 543 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |