Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 20 299 NP_444254 20 299 NP_444253 20 299 NP_444255 20 299 XP_005247551 20 299 XP_005247550 20 299 XP_006713712 20 299 XP_005247549 20 299 NP_001026851 17 3301 NP_004928 17 3301 NP_001138617 17 3301 NP_005619 17 3301 XP_005259224 17 3301 XP_006721526 17 3301 XP_005256542 17 3301 NP_005763 17 4312 NP_001244073 16 5631 NP_001244074 16 5631 NP_689651 16 5631 NP_085911 16 5631 NP_004390 16 5631 XP_006719116 16 5631 XP_006719115 16 5631 XP_005253390 16 5631 XP_006719114 16 5631 XP_006719113 16 5631 XP_006719112 16 5631 XP_006719111 16 5631 XP_006719110 16 5631 XP_006719109 16 5631 XP_006719108 16 5631 XP_006719107 16 5631 XP_005253388 16 5631 XP_006719106 16 5631 XP_006719105 16 5631 XP_006719104 16 5631 XP_005253105 16 5631 XP_005249358 16 5631 XP_005249357 16 5631 XP_005249356 16 5631 NP_115487 16 5631 NP_853553 16 7355 NP_955751 16 7355 XP_005264449 16 7355 NP_001258754 15 9605 NP_001258753 15 9605 NP_004559 15 9605 NP_976221 15 9605 NP_001230829 15 9605 NP_005327 15 9605 NP_001182220 15 9605 NP_001258752 15 9605 NP_001258751 15 9605 NP_001027018 15 9605 NP_002631 15 9605 NP_942130 15 9605 XP_006722547 15 9605 XP_006715176 15 9605 XP_006715175 15 9605 XP_005249238 15 9605 XP_006712539 15 9605 XP_005247059 15 9605 XP_005247058 15 9605 XP_006712538 15 9605 XP_005247060 15 9605 XP_005247057 15 9605>NP_444256 Length = 1794 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VNQTGTRIK 9 VN+TGTRIK Sbjct: 1525 VNKTGTRIK 1533>NP_444254 Length = 1845 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VNQTGTRIK 9 VN+TGTRIK Sbjct: 1525 VNKTGTRIK 1533>NP_444253 Length = 1914 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VNQTGTRIK 9 VN+TGTRIK Sbjct: 1594 VNKTGTRIK 1602>NP_444255 Length = 1863 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VNQTGTRIK 9 VN+TGTRIK Sbjct: 1594 VNKTGTRIK 1602>XP_005247551 Length = 1855 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VNQTGTRIK 9 VN+TGTRIK Sbjct: 1535 VNKTGTRIK 1543>XP_005247550 Length = 1856 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VNQTGTRIK 9 VN+TGTRIK Sbjct: 1536 VNKTGTRIK 1544>XP_006713712 Length = 1923 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VNQTGTRIK 9 VN+TGTRIK Sbjct: 1604 VNKTGTRIK 1612>XP_005247549 Length = 1924 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VNQTGTRIK 9 VN+TGTRIK Sbjct: 1604 VNKTGTRIK 1612>NP_001026851 Length = 400 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NQTGTRIK 9 NQTG RI+ Sbjct: 107 NQTGPRIR 114>NP_004928 Length = 367 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NQTGTRIK 9 NQTG RI+ Sbjct: 107 NQTGPRIR 114>NP_001138617 Length = 339 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NQTGTRIK 9 N TGTR+K Sbjct: 10 NITGTRVK 17>NP_005619 Length = 541 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NQTGTRIK 9 N TGTR+K Sbjct: 212 NITGTRVK 219>XP_005259224 Length = 469 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NQTGTRIK 9 N TGTR+K Sbjct: 212 NITGTRVK 219>XP_006721526 Length = 400 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NQTGTRIK 9 NQTG RI+ Sbjct: 107 NQTGPRIR 114>XP_005256542 Length = 400 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NQTGTRIK 9 NQTG RI+ Sbjct: 107 NQTGPRIR 114>NP_005763 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNQTGTRI 8 +NQTGT + Sbjct: 66 INQTGTTL 73>NP_001244073 Length = 970 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 468 LSQTGTELK 476>NP_001244074 Length = 880 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 442 LSQTGTELK 450>NP_689651 Length = 970 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 468 LSQTGTELK 476>NP_085911 Length = 906 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 468 LSQTGTELK 476>NP_004390 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 468 LSQTGTELK 476>XP_006719116 Length = 787 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 260 LSQTGTELK 268>XP_006719115 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 504 LSQTGTELK 512>XP_005253390 Length = 942 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 504 LSQTGTELK 512>XP_006719114 Length = 954 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 504 LSQTGTELK 512>XP_006719113 Length = 967 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 504 LSQTGTELK 512>XP_006719112 Length = 969 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 442 LSQTGTELK 450>XP_006719111 Length = 969 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 442 LSQTGTELK 450>XP_006719110 Length = 995 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 468 LSQTGTELK 476>XP_006719109 Length = 995 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 468 LSQTGTELK 476>XP_006719108 Length = 995 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 468 LSQTGTELK 476>XP_006719107 Length = 995 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 468 LSQTGTELK 476>XP_005253388 Length = 1006 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 504 LSQTGTELK 512>XP_006719106 Length = 1018 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 504 LSQTGTELK 512>XP_006719105 Length = 1031 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 504 LSQTGTELK 512>XP_006719104 Length = 1031 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNQTGTRIK 9 ++QTGT +K Sbjct: 504 LSQTGTELK 512>XP_005253105 Length = 424 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QTGTRIK 9 +TGTR+K Sbjct: 10 RTGTRVK 16>XP_005249358 Length = 145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NQTGTRIK 9 N GTRIK Sbjct: 113 NPVGTRIK 120>XP_005249357 Length = 145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NQTGTRIK 9 N GTRIK Sbjct: 113 NPVGTRIK 120>XP_005249356 Length = 198 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NQTGTRIK 9 N GTRIK Sbjct: 166 NPVGTRIK 173>NP_115487 Length = 145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NQTGTRIK 9 N GTRIK Sbjct: 113 NPVGTRIK 120>NP_853553 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNQTGTRI 8 + QTGTR+ Sbjct: 252 LGQTGTRL 259>NP_955751 Length = 229 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NQTGTRI 8 NQTG R+ Sbjct: 188 NQTGVRL 194>XP_005264449 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNQTGTRI 8 + QTGTR+ Sbjct: 309 LGQTGTRL 316>NP_001258754 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNQTGTR 7 VN+TGT+ Sbjct: 79 VNKTGTQ 85>NP_001258753 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNQTGTR 7 VN+TGT+ Sbjct: 79 VNKTGTQ 85>NP_004559 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNQTGTR 7 VN+TGT+ Sbjct: 79 VNKTGTQ 85>NP_976221 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNQTGTRI 8 + +TGTRI Sbjct: 249 MQETGTRI 256>NP_001230829 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNQTGTRI 8 + +TGTRI Sbjct: 285 MQETGTRI 292>NP_005327 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNQTGTRI 8 + +TGTRI Sbjct: 249 MQETGTRI 256>NP_001182220 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNQTGTR 7 VN+TGT+ Sbjct: 83 VNKTGTQ 89>NP_001258752 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNQTGTR 7 VN+TGT+ Sbjct: 98 VNKTGTQ 104>NP_001258751 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNQTGTR 7 VN+TGT+ Sbjct: 93 VNKTGTQ 99>NP_001027018 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNQTGTR 7 VN+TGT+ Sbjct: 77 VNRTGTQ 83>NP_002631 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNQTGTR 7 VN+TGT+ Sbjct: 77 VNRTGTQ 83>NP_942130 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNQTGTR 7 VN+TGT+ Sbjct: 77 VNRTGTQ 83>XP_006722547 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNQTGTR 7 VN+TGT+ Sbjct: 77 VNRTGTQ 83>XP_006715176 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNQTGTR 7 VN+TGT+ Sbjct: 83 VNKTGTQ 89>XP_006715175 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNQTGTR 7 VN+TGT+ Sbjct: 83 VNKTGTQ 89>XP_005249238 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNQTGTR 7 VN+TGT+ Sbjct: 112 VNKTGTQ 118>XP_006712539 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNQTGTRI 8 + +TGTRI Sbjct: 249 MQETGTRI 256>XP_005247059 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNQTGTRI 8 + +TGTRI Sbjct: 249 MQETGTRI 256>XP_005247058 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNQTGTRI 8 + +TGTRI Sbjct: 249 MQETGTRI 256>XP_006712538 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNQTGTRI 8 + +TGTRI Sbjct: 249 MQETGTRI 256>XP_005247060 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNQTGTRI 8 + +TGTRI Sbjct: 249 MQETGTRI 256>XP_005247057 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNQTGTRI 8 + +TGTRI Sbjct: 249 MQETGTRI 256Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.126 0.333 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 490,228 Number of extensions: 662 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |