Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 21 175 XP_005262424 21 175 NP_001025169 18 1482 XP_005263333 18 1482 NP_055178 18 1935 NP_001264984 18 1935 XP_005266395 18 1935 NP_066015 16 5631 NP_001038941 16 5631 NP_001263303 16 5631 XP_005258381 16 5631 XP_006722580 16 5631 XP_006722579 16 5631 XP_005258380 16 5631 XP_005252044 16 5631 XP_006717170 16 5631 XP_006714166 16 5631 XP_006714164 16 5631 XP_006714163 16 5631 XP_006714162 16 5631 XP_006714161 16 5631 XP_006714160 16 5631 XP_005262823 16 5631 NP_001161743 16 7355 NP_694547 16 7355 NP_001229742 16 7355 NP_055757 16 7355 NP_001229740 16 7355 NP_004659 16 7355 NP_001229738 16 7355 NP_001034180 16 7355 NP_002756 16 7355 NP_001032900 16 7355 NP_115871 16 7355 NP_060823 16 7355 NP_874363 16 7355 NP_004484 16 7355 NP_000661 16 7355 XP_005259717 16 7355 XP_005259716 16 7355 XP_005267890 16 7355 XP_006716232 16 7355 XP_006716231 16 7355 XP_005248740 16 7355 XP_005248738 16 7355 XP_005248737 16 7355 XP_005248736 16 7355 XP_005247222 16 7355 NP_003565 16 7355 NP_006448 15 9605 NP_001243357 15 9605 NP_001035847 15 9605 NP_004974 15 9605 NP_005125 15 9605 NP_060267 15 9605 XP_006714132 15 9605 XP_005262752 15 9605 XP_005262750 15 9605 XP_006714130 15 9605 XP_006714129 15 9605 XP_006711369 15 9605 XP_006711368 15 9605>NP_722576 Length = 3080 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VNNAAFTPA 9 VNN+AFTPA Sbjct: 1567 VNNSAFTPA 1575>XP_005262424 Length = 2875 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VNNAAFTPA 9 VNN+AFTPA Sbjct: 1362 VNNSAFTPA 1370>NP_001025169 Length = 340 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NNAAFTPA 9 NN+ FTPA Sbjct: 259 NNSGFTPA 266>XP_005263333 Length = 358 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NNAAFTPA 9 NN+ FTPA Sbjct: 259 NNSGFTPA 266>NP_055178 Length = 4579 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NNAAFTP 8 NNA FTP Sbjct: 160 NNAVFTP 166>NP_001264984 Length = 4432 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NNAAFTP 8 NNA FTP Sbjct: 13 NNAVFTP 19>XP_005266395 Length = 4588 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NNAAFTP 8 NNA FTP Sbjct: 160 NNAVFTP 166>NP_066015 Length = 2579 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNNAAFTP 8 V N+AFTP Sbjct: 1260 VINSAFTP 1267>NP_001038941 Length = 314 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VNNAAFTP 8 VN++AF+P Sbjct: 24 VNSSAFSP 31>NP_001263303 Length = 315 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VNNAAFTP 8 VN++AF+P Sbjct: 24 VNSSAFSP 31>XP_005258381 Length = 2224 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNNAAFTP 8 V N+AFTP Sbjct: 905 VINSAFTP 912>XP_006722580 Length = 2532 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNNAAFTP 8 V N+AFTP Sbjct: 1213 VINSAFTP 1220>XP_006722579 Length = 2544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNNAAFTP 8 V N+AFTP Sbjct: 1260 VINSAFTP 1267>XP_005258380 Length = 2578 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNNAAFTP 8 V N+AFTP Sbjct: 1260 VINSAFTP 1267>XP_005252044 Length = 288 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VNNAAFTP 8 VN++AF+P Sbjct: 24 VNSSAFSP 31>XP_006717170 Length = 291 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VNNAAFTP 8 VN++AF+P Sbjct: 24 VNSSAFSP 31>XP_006714166 Length = 536 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NNAAFTP 8 NNAA TP Sbjct: 148 NNAAATP 154>XP_006714164 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NNAAFTP 8 NNAA TP Sbjct: 89 NNAAATP 95>XP_006714163 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NNAAFTP 8 NNAA TP Sbjct: 89 NNAAATP 95>XP_006714162 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NNAAFTP 8 NNAA TP Sbjct: 89 NNAAATP 95>XP_006714161 Length = 1020 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NNAAFTP 8 NNAA TP Sbjct: 98 NNAAATP 104>XP_006714160 Length = 1047 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NNAAFTP 8 NNAA TP Sbjct: 148 NNAAATP 154>XP_005262823 Length = 1070 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NNAAFTP 8 NNAA TP Sbjct: 148 NNAAATP 154>NP_001161743 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NNAAFTP 8 N+AAF+P Sbjct: 573 NSAAFSP 579>NP_694547 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NNAAFTP 8 N+AAF+P Sbjct: 577 NSAAFSP 583>NP_001229742 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 VNNA TP Sbjct: 236 VNNAGQTP 243>NP_055757 Length = 722 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 VNNA TP Sbjct: 236 VNNAGQTP 243>NP_001229740 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 VNNA TP Sbjct: 236 VNNAGQTP 243>NP_004659 Length = 1857 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 +NN FTP Sbjct: 549 LNNPPFTP 556>NP_001229738 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 VNNA TP Sbjct: 236 VNNAGQTP 243>NP_001034180 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VNNAAF 6 +NNAAF Sbjct: 264 INNAAF 269>NP_002756 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VNNAAF 6 +NNAAF Sbjct: 261 INNAAF 266>NP_001032900 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 NNAAFTPA 9 NN F PA Sbjct: 56 NNCVFAPA 63>NP_115871 Length = 1537 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 VNN AF P Sbjct: 240 VNNFAFGP 247>NP_060823 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 NNAAFTP 8 NN FTP Sbjct: 144 NNETFTP 150>NP_874363 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VNNAAFTPA 9 +NN A TPA Sbjct: 1 MNNQARTPA 9>NP_004484 Length = 261 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 NNAAFTPA 9 NN F PA Sbjct: 56 NNCVFAPA 63>NP_000661 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 +NNA TP Sbjct: 190 INNAKVTP 197>XP_005259717 Length = 1738 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 VNN AF P Sbjct: 240 VNNFAFGP 247>XP_005259716 Length = 1738 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 VNN AF P Sbjct: 240 VNNFAFGP 247>XP_005267890 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 NNAAFTP 8 NN FTP Sbjct: 144 NNETFTP 150>XP_006716232 Length = 2753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 +NN FTP Sbjct: 549 LNNPPFTP 556>XP_006716231 Length = 2753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 +NN FTP Sbjct: 549 LNNPPFTP 556>XP_005248740 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 VNNA TP Sbjct: 195 VNNAGQTP 202>XP_005248738 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 VNNA TP Sbjct: 236 VNNAGQTP 243>XP_005248737 Length = 747 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 VNNA TP Sbjct: 261 VNNAGQTP 268>XP_005248736 Length = 752 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNNAAFTP 8 VNNA TP Sbjct: 261 VNNAGQTP 268>XP_005247222 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NNAAFTP 8 N+AAF+P Sbjct: 577 NSAAFSP 583>NP_003565 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VNNAAFTPA 9 +NN TPA Sbjct: 156 INNTVATPA 164>NP_006448 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAAFTPA 9 ++AFTPA Sbjct: 147 SSAFTPA 153>NP_001243357 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAAFTPA 9 ++AFTPA Sbjct: 25 SSAFTPA 31>NP_001035847 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NNAAFTP 8 NN++F+P Sbjct: 599 NNSSFSP 605>NP_004974 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NAAFTP 8 NAAF+P Sbjct: 5 NAAFSP 10>NP_005125 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NNAAFTP 8 NN++F+P Sbjct: 582 NNSSFSP 588>NP_060267 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NAAFTPA 9 NAA TPA Sbjct: 31 NAAATPA 37>XP_006714132 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAAFTPA 9 ++AFTPA Sbjct: 147 SSAFTPA 153>XP_005262752 Length = 728 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAAFTPA 9 ++AFTPA Sbjct: 147 SSAFTPA 153>XP_005262750 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAAFTPA 9 ++AFTPA Sbjct: 147 SSAFTPA 153>XP_006714130 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAAFTPA 9 ++AFTPA Sbjct: 147 SSAFTPA 153>XP_006714129 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAAFTPA 9 ++AFTPA Sbjct: 147 SSAFTPA 153>XP_006711369 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NAAFTP 8 NAAF+P Sbjct: 5 NAAFSP 10>XP_006711368 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NAAFTP 8 NAAF+P Sbjct: 68 NAAFSP 73Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.119 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 611,710 Number of extensions: 1155 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |