Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 390 NP_001035957 20 390 XP_006721990 20 390 XP_006721989 20 390 XP_005258041 20 390 XP_006721988 20 390 XP_006721987 20 390 XP_006721986 20 390 XP_005258040 20 390 XP_006721985 20 390 XP_005272248 17 3301 XP_006717135 17 3301 XP_006717132 17 3301 XP_005272243 17 3301 XP_005272242 17 3301 XP_006717131 17 3301 XP_006717130 17 3301 NP_002830 17 4312 NP_055192 17 4312 NP_001123359 17 4312 XP_006716891 17 4312 XP_006716890 17 4312 XP_006716889 17 4312 XP_006716888 17 4312 XP_006716887 17 4312 XP_006716886 17 4312 XP_006716885 17 4312 XP_006716884 17 4312 XP_006716883 17 4312 XP_006716882 17 4312 XP_006716881 17 4312 XP_006716880 17 4312 XP_006716879 17 4312 XP_006716878 17 4312 XP_006716877 17 4312 XP_006716876 17 4312 XP_005250326 17 4312 NP_006128 16 5631 XP_005248773 16 5631 NP_940970 16 5631 NP_000531 16 7355 NP_001036188 16 7355 NP_055289 16 7355 NP_078836 16 7355 XP_006723382 16 7355 XP_006723381 16 7355 XP_006723380 16 7355 XP_005269208 16 7355 XP_006719664 16 7355 XP_005269207 16 7355 NP_001138897 15 9605 NP_001243469 15 9605 NP_001243468 15 9605 NP_001278234 15 9605 NP_079039 15 9605 NP_005117 15 9605 XP_006713514 15 9605 XP_005271270 15 9605 XP_005271269 15 9605 NP_005381 15 9605>NP_000258 Length = 2818 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VNLYSAGT 8 VNLYSAGT Sbjct: 2307 VNLYSAGT 2314>NP_001035957 Length = 2839 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VNLYSAGT 8 VNLYSAGT Sbjct: 2328 VNLYSAGT 2335>XP_006721990 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VNLYSAGT 8 VNLYSAGT Sbjct: 2338 VNLYSAGT 2345>XP_006721989 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VNLYSAGT 8 VNLYSAGT Sbjct: 2338 VNLYSAGT 2345>XP_005258041 Length = 2836 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VNLYSAGT 8 VNLYSAGT Sbjct: 2307 VNLYSAGT 2314>XP_006721988 Length = 2846 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VNLYSAGT 8 VNLYSAGT Sbjct: 2317 VNLYSAGT 2324>XP_006721987 Length = 2849 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VNLYSAGT 8 VNLYSAGT Sbjct: 2338 VNLYSAGT 2345>XP_006721986 Length = 2854 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VNLYSAGT 8 VNLYSAGT Sbjct: 2325 VNLYSAGT 2332>XP_005258040 Length = 2857 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VNLYSAGT 8 VNLYSAGT Sbjct: 2328 VNLYSAGT 2335>XP_006721985 Length = 2867 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VNLYSAGT 8 VNLYSAGT Sbjct: 2338 VNLYSAGT 2345>XP_005272248 Length = 1226 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VNLYSAG 7 VNLYS+G Sbjct: 750 VNLYSSG 756>XP_006717135 Length = 1232 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VNLYSAG 7 VNLYS+G Sbjct: 756 VNLYSSG 762>XP_006717132 Length = 1254 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VNLYSAG 7 VNLYS+G Sbjct: 794 VNLYSSG 800>XP_005272243 Length = 1264 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VNLYSAG 7 VNLYS+G Sbjct: 788 VNLYSSG 794>XP_005272242 Length = 1265 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VNLYSAG 7 VNLYS+G Sbjct: 789 VNLYSSG 795>XP_006717131 Length = 1269 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VNLYSAG 7 VNLYS+G Sbjct: 793 VNLYSSG 799>XP_006717130 Length = 1270 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VNLYSAG 7 VNLYS+G Sbjct: 794 VNLYSSG 800>NP_002830 Length = 1912 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 924 NLHSEGTT 931>NP_055192 Length = 621 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNLYSAGT 8 VNL+ AGT Sbjct: 466 VNLFPAGT 473>NP_001123359 Length = 568 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNLYSAGT 8 VNL+ AGT Sbjct: 413 VNLFPAGT 420>XP_006716891 Length = 1882 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 874 NLHSEGTT 881>XP_006716890 Length = 1893 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 902 NLHSEGTT 909>XP_006716889 Length = 1899 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 911 NLHSEGTT 918>XP_006716888 Length = 1912 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 924 NLHSEGTT 931>XP_006716887 Length = 1912 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 924 NLHSEGTT 931>XP_006716886 Length = 1913 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 924 NLHSEGTT 931>XP_006716885 Length = 1918 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 924 NLHSEGTT 931>XP_006716884 Length = 1922 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 915 NLHSEGTT 922>XP_006716883 Length = 1923 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 915 NLHSEGTT 922>XP_006716882 Length = 1927 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 924 NLHSEGTT 931>XP_006716881 Length = 1928 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 920 NLHSEGTT 927>XP_006716880 Length = 1929 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 924 NLHSEGTT 931>XP_006716879 Length = 1931 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 924 NLHSEGTT 931>XP_006716878 Length = 1931 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 924 NLHSEGTT 931>XP_006716877 Length = 1931 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 924 NLHSEGTT 931>XP_006716876 Length = 1932 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 NL+S GTT Sbjct: 924 NLHSEGTT 931>XP_005250326 Length = 475 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNLYSAGT 8 VNL+ AGT Sbjct: 320 VNLFPAGT 327>NP_006128 Length = 240 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNLYSAGT 8 VN+Y +GT Sbjct: 120 VNVYGSGT 127>XP_005248773 Length = 223 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNLYSAGT 8 VN YS GT Sbjct: 13 VNKYSTGT 20>NP_940970 Length = 223 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNLYSAGT 8 VN YS GT Sbjct: 13 VNKYSTGT 20>NP_000531 Length = 5038 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 ++YS GTT Sbjct: 3171 SIYSLGTT 3178>NP_001036188 Length = 5033 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 ++YS GTT Sbjct: 3171 SIYSLGTT 3178>NP_055289 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LYSAGTT 9 LY++GTT Sbjct: 429 LYASGTT 435>NP_078836 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LYSAGTT 9 LY++GTT Sbjct: 297 LYTSGTT 303>XP_006723382 Length = 5027 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 ++YS GTT Sbjct: 3171 SIYSLGTT 3178>XP_006723381 Length = 5031 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 ++YS GTT Sbjct: 3170 SIYSLGTT 3177>XP_006723380 Length = 5032 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLYSAGTT 9 ++YS GTT Sbjct: 3171 SIYSLGTT 3178>XP_005269208 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LYSAGTT 9 LY++GTT Sbjct: 297 LYTSGTT 303>XP_006719664 Length = 578 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LYSAGTT 9 LY++GTT Sbjct: 189 LYTSGTT 195>XP_005269207 Length = 685 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LYSAGTT 9 LY++GTT Sbjct: 296 LYTSGTT 302>NP_001138897 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNLYSAGT 8 VNL AGT Sbjct: 360 VNLLKAGT 367>NP_001243469 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NLYSAG 7 NLYS+G Sbjct: 211 NLYSSG 216>NP_001243468 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NLYSAG 7 NLYS+G Sbjct: 212 NLYSSG 217>NP_001278234 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NLYSAG 7 NLYS+G Sbjct: 198 NLYSSG 203>NP_079039 Length = 848 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NLYSAGT 8 N+Y AGT Sbjct: 674 NIYLAGT 680>NP_005117 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNLYSAGT 8 VNL AGT Sbjct: 435 VNLLKAGT 442>XP_006713514 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNLYSAGT 8 VNL AGT Sbjct: 435 VNLLKAGT 442>XP_005271270 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NLYSAGT 8 N+Y AGT Sbjct: 385 NIYLAGT 391>XP_005271269 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NLYSAGT 8 N+Y AGT Sbjct: 609 NIYLAGT 615>NP_005381 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NLYSAGTT 9 NLY GT+ Sbjct: 223 NLYGMGTS 230Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.120 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 596,591 Number of extensions: 854 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |