Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 20 390 NP_036462 20 390 NP_001243397 20 390 XP_005269721 20 390 NP_001092882 18 1135 NP_006757 18 1135 NP_001092883 18 1135 XP_005273706 18 1135 NP_001157576 16 5631 NP_001157577 16 5631 NP_061868 16 5631 NP_001157578 16 5631 XP_005261981 16 5631 XP_006724481 16 5631 XP_005261980 16 5631 NP_000431 16 7355 NP_006195 16 7355 NP_064506 16 7355 NP_001139686 16 7355 NP_001139685 16 7355 NP_073608 16 7355 NP_055108 16 7355 XP_006719629 16 7355 XP_006719628 16 7355 XP_006719627 16 7355 XP_006719626 16 7355 NP_000775 15 9605 NP_001140 15 9605 NP_001191332 15 9605 NP_001191333 15 9605 NP_066267 15 9605 NP_001032961 15 9605 NP_057400 15 9605 NP_001139187 15 9605 XP_006724219 15 9605 XP_006724218 15 9605 XP_006724217 15 9605 XP_005269773 15 9605 XP_006717866 15 9605 XP_005269772 15 9605 XP_006717865 15 9605 XP_006717864 15 9605 XP_006717863 15 9605 XP_006717862 15 9605 XP_006717861 15 9605 XP_006717860 15 9605 XP_006717859 15 9605 XP_006717858 15 9605 XP_006717857 15 9605 XP_006717856 15 9605 XP_006717855 15 9605 XP_006717854 15 9605 XP_006717853 15 9605 XP_006717852 15 9605 XP_006717851 15 9605 XP_006717850 15 9605 XP_006717849 15 9605 XP_006717848 15 9605 XP_006717847 15 9605 XP_006717846 15 9605 XP_006717845 15 9605 XP_006716050 15 9605 XP_006712656 15 9605 XP_005264025 15 9605 XP_006712655 15 9605 NP_777557 15 9605 NP_689726 15 9605>NP_001243398 Length = 1781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNLM APAY Sbjct: 1677 VNLMPAPAY 1685>NP_036462 Length = 2073 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNLM APAY Sbjct: 1969 VNLMPAPAY 1977>NP_001243397 Length = 1890 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNLM APAY Sbjct: 1786 VNLMPAPAY 1794>XP_005269721 Length = 2073 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNLM APAY Sbjct: 1969 VNLMPAPAY 1977>NP_001092882 Length = 2004 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VNLMSAPAY 9 VNLM PAY Sbjct: 1901 VNLMPTPAY 1909>NP_006757 Length = 2004 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VNLMSAPAY 9 VNLM PAY Sbjct: 1901 VNLMPTPAY 1909>NP_001092883 Length = 2004 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VNLMSAPAY 9 VNLM PAY Sbjct: 1901 VNLMPTPAY 1909>XP_005273706 Length = 1997 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VNLMSAPAY 9 VNLM PAY Sbjct: 1894 VNLMPTPAY 1902>NP_001157576 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LMSAPAY 9 LMS PAY Sbjct: 941 LMSRPAY 947>NP_001157577 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LMSAPAY 9 LMS PAY Sbjct: 921 LMSRPAY 927>NP_061868 Length = 1211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LMSAPAY 9 LMS PAY Sbjct: 941 LMSRPAY 947>NP_001157578 Length = 338 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LMSAPAY 9 LMS PAY Sbjct: 68 LMSRPAY 74>XP_005261981 Length = 970 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LMSAPAY 9 LMS PAY Sbjct: 700 LMSRPAY 706>XP_006724481 Length = 1164 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LMSAPAY 9 LMS PAY Sbjct: 894 LMSRPAY 900>XP_005261980 Length = 1191 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LMSAPAY 9 LMS PAY Sbjct: 921 LMSRPAY 927>NP_000431 Length = 860 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NLMSAPA 8 N+M+APA Sbjct: 358 NIMNAPA 364>NP_006195 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NLMSAPA 8 N+M+APA Sbjct: 360 NMMNAPA 366>NP_064506 Length = 1516 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LMSAPAY 9 +MSAP Y Sbjct: 320 IMSAPVY 326>NP_001139686 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NLMSAPAY 9 NL+ PAY Sbjct: 216 NLLDEPAY 223>NP_001139685 Length = 674 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NLMSAPAY 9 NL+ PAY Sbjct: 208 NLLDEPAY 215>NP_073608 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NLMSAPAY 9 NL+ PAY Sbjct: 208 NLLDEPAY 215>NP_055108 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNLMSAPA 8 VNL +APA Sbjct: 215 VNLSAAPA 222>XP_006719629 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NLMSAPAY 9 NL+ PAY Sbjct: 109 NLLDEPAY 116>XP_006719628 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NLMSAPAY 9 NL+ PAY Sbjct: 199 NLLDEPAY 206>XP_006719627 Length = 699 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NLMSAPAY 9 NL+ PAY Sbjct: 216 NLLDEPAY 223>XP_006719626 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NLMSAPAY 9 NL+ PAY Sbjct: 230 NLLDEPAY 237>NP_000775 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VNLMSAP 7 VNL SAP Sbjct: 106 VNLASAP 112>NP_001140 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 107 VNLVSSPIH 115>NP_001191332 Length = 1861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 967 VNLVSSPIH 975>NP_001191333 Length = 1868 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 974 VNLVSSPIH 982>NP_066267 Length = 4377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 973 VNLVSSPIH 981>NP_001032961 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 +NL++ PA+ Sbjct: 1004 INLIALPAF 1012>NP_057400 Length = 1251 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 +NL++ PA+ Sbjct: 1005 INLIALPAF 1013>NP_001139187 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNLMSAP 7 VNL++AP Sbjct: 416 VNLLTAP 422>XP_006724219 Length = 1157 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNLMSAP 7 +NL+SAP Sbjct: 518 LNLLSAP 524>XP_006724218 Length = 1200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNLMSAP 7 +NL+SAP Sbjct: 596 LNLLSAP 602>XP_006724217 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNLMSAP 7 +NL+SAP Sbjct: 596 LNLLSAP 602>XP_005269773 Length = 1867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 973 VNLVSSPIH 981>XP_006717866 Length = 1877 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 991 VNLVSSPIH 999>XP_005269772 Length = 1885 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 991 VNLVSSPIH 999>XP_006717865 Length = 1898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 995 VNLVSSPIH 1003>XP_006717864 Length = 1924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 995 VNLVSSPIH 1003>XP_006717863 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 995 VNLVSSPIH 1003>XP_006717862 Length = 1981 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 995 VNLVSSPIH 1003>XP_006717861 Length = 1984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 995 VNLVSSPIH 1003>XP_006717860 Length = 1993 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 995 VNLVSSPIH 1003>XP_006717859 Length = 2758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 995 VNLVSSPIH 1003>XP_006717858 Length = 2775 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 995 VNLVSSPIH 1003>XP_006717857 Length = 2794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 995 VNLVSSPIH 1003>XP_006717856 Length = 2833 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 995 VNLVSSPIH 1003>XP_006717855 Length = 2837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 995 VNLVSSPIH 1003>XP_006717854 Length = 2852 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 995 VNLVSSPIH 1003>XP_006717853 Length = 2854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 995 VNLVSSPIH 1003>XP_006717852 Length = 3508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 102 VNLVSSPIH 110>XP_006717851 Length = 3513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 107 VNLVSSPIH 115>XP_006717850 Length = 4364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 958 VNLVSSPIH 966>XP_006717849 Length = 4383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 977 VNLVSSPIH 985>XP_006717848 Length = 4392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 986 VNLVSSPIH 994>XP_006717847 Length = 4395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 989 VNLVSSPIH 997>XP_006717846 Length = 4396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 990 VNLVSSPIH 998>XP_006717845 Length = 4397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 VNL+S+P + Sbjct: 991 VNLVSSPIH 999>XP_006716050 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNLMSAP 7 VNL++AP Sbjct: 416 VNLLTAP 422>XP_006712656 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 +NL++ PA+ Sbjct: 515 INLIALPAF 523>XP_005264025 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 +NL++ PA+ Sbjct: 935 INLIALPAF 943>XP_006712655 Length = 1251 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VNLMSAPAY 9 +NL++ PA+ Sbjct: 1005 INLIALPAF 1013>NP_777557 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LMSAPA 8 LMSAPA Sbjct: 207 LMSAPA 212>NP_689726 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNLMSAP 7 +NL+SAP Sbjct: 635 LNLLSAP 641Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.124 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 570,026 Number of extensions: 564 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |