Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 18 1135 NP_004561 18 1135 XP_005253450 18 1135 XP_006719151 18 1135 NP_067645 18 1935 NP_001005198 17 2528 NP_001034612 17 4312 NP_000070 17 4312 NP_619639 17 4312 NP_733842 17 4312 NP_872299 16 5631 NP_001938 16 5631 NP_001002905 16 5631 XP_005256291 16 5631 XP_005256290 16 5631 XP_006721396 16 5631 NP_000733 16 7355 NP_005288 16 7355 NP_001243502 16 7355 NP_000735 16 7355 NP_570843 16 7355 NP_000071 16 7355 NP_000734 16 7355 NP_001269384 16 7355 NP_001128529 16 7355 NP_001160166 16 7355 NP_001177962 16 7355 NP_071371 16 7355 NP_060667 16 7355 NP_955458 16 7355 NP_001161713 16 7355 NP_060911 16 7355 XP_005260506 16 7355 XP_006723884 16 7355 XP_005260248 16 7355 XP_006720445 16 7355 XP_005273454 16 7355 XP_006716346 16 7355 XP_006716345 16 7355 XP_005263372 16 7355 XP_006712014 16 7355 NP_001005467 16 7355 NP_870998 15 9605 NP_001186170 15 9605 NP_001229338 15 9605 NP_001755 15 9605 NP_003928 15 9605 NP_073588 15 9605 XP_005259168 15 9605 XP_006723005 15 9605 XP_005248296 15 9605 XP_005248295 15 9605 XP_006710665 15 9605 NP_009208 15 9605>NP_001275701 Length = 1486 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 VNIV PSLM Sbjct: 198 VNIVEPSLM 206>NP_004561 Length = 1445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 VNIV PSLM Sbjct: 198 VNIVEPSLM 206>XP_005253450 Length = 1486 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 VNIV PSLM Sbjct: 198 VNIVEPSLM 206>XP_006719151 Length = 1486 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 VNIV PSLM Sbjct: 198 VNIVEPSLM 206>NP_067645 Length = 532 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VNIVVPSLM 9 VN+VVPS++ Sbjct: 513 VNVVVPSVI 521>NP_001005198 Length = 346 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VNIVVPSL 8 +NI+VPSL Sbjct: 240 INILVPSL 247>NP_001034612 Length = 482 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 VN+++P L+ Sbjct: 261 VNVIIPCLL 269>NP_000070 Length = 457 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 VN+++P L+ Sbjct: 236 VNVIIPCLL 244>NP_619639 Length = 4074 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VNIVVPSL 8 VN+VVP+L Sbjct: 65 VNMVVPAL 72>NP_733842 Length = 3396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VNIVVPSL 8 VN+VVP+L Sbjct: 65 VNMVVPAL 72>NP_872299 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNIVVPSL 8 VN+V PSL Sbjct: 271 VNVVSPSL 278>NP_001938 Length = 419 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VNIVVPSLM 9 +N+ +P LM Sbjct: 92 INLAIPGLM 100>NP_001002905 Length = 311 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NIVVPSL 8 NI+VPSL Sbjct: 206 NILVPSL 212>XP_005256291 Length = 678 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNIVVPSL 8 VN+V PSL Sbjct: 130 VNVVSPSL 137>XP_005256290 Length = 689 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNIVVPSL 8 VN+V PSL Sbjct: 141 VNVVSPSL 148>XP_006721396 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNIVVPSL 8 VN+V PSL Sbjct: 271 VNVVSPSL 278>NP_000733 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 +N+++P L+ Sbjct: 270 INLIIPCLL 278>NP_005288 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VNIVVPSL 8 +NI++PS+ Sbjct: 108 INIIMPSV 115>NP_001243502 Length = 451 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 +N+++P L+ Sbjct: 72 INLIIPCLL 80>NP_000735 Length = 627 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 +N+++P L+ Sbjct: 248 INLIIPCLL 256>NP_570843 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNIVVPSL 8 VN+ VPS+ Sbjct: 469 VNVAVPSV 476>NP_000071 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 +NI+VP ++ Sbjct: 245 INIIVPCVL 253>NP_000734 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 +N+++P L+ Sbjct: 246 INLIIPCLL 254>NP_001269384 Length = 514 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 +N+++P L+ Sbjct: 255 INLIIPCLL 263>NP_001128529 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VNIVVPSL 8 VN+ VPS+ Sbjct: 475 VNVAVPSV 482>NP_001160166 Length = 489 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 +N+++P L+ Sbjct: 246 INLIIPCLL 254>NP_001177962 Length = 664 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNIVVPS 7 VN++VPS Sbjct: 188 VNVLVPS 194>NP_071371 Length = 627 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 VNIV P+L+ Sbjct: 465 VNIVPPALV 473>NP_060667 Length = 681 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 VNIV P+L+ Sbjct: 519 VNIVPPALV 527>NP_955458 Length = 679 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 VNIV P+L+ Sbjct: 517 VNIVPPALV 525>NP_001161713 Length = 874 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNIVVPS 7 VN++VPS Sbjct: 265 VNVLVPS 271>NP_060911 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNIVVPS 7 VNI+VP+ Sbjct: 155 VNIIVPT 161>XP_005260506 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 VNIV P+L+ Sbjct: 361 VNIVPPALV 369>XP_006723884 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 VNIV P+L+ Sbjct: 463 VNIVPPALV 471>XP_005260248 Length = 451 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 +N+++P L+ Sbjct: 72 INLIIPCLL 80>XP_006720445 Length = 438 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 +N+++P L+ Sbjct: 179 INLIIPCLL 187>XP_005273454 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 +N+++P L+ Sbjct: 111 INLIIPCLL 119>XP_006716346 Length = 426 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 +N+++P L+ Sbjct: 167 INLIIPCLL 175>XP_006716345 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 +N+++P L+ Sbjct: 270 INLIIPCLL 278>XP_005263372 Length = 208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VNIVVPSLM 9 VN+V P L+ Sbjct: 173 VNVVAPELI 181>XP_006712014 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNIVVPS 7 VN++VPS Sbjct: 265 VNVLVPS 271>NP_001005467 Length = 313 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNIVVPS 7 +NI+VPS Sbjct: 205 INIMVPS 211>NP_870998 Length = 1461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VNIVVPSL 8 V++VVP+L Sbjct: 319 VSVVVPTL 326>NP_001186170 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VNIVVPS 7 VNI+ PS Sbjct: 388 VNIITPS 394>NP_001229338 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VNIVVPS 7 VN+ VPS Sbjct: 247 VNVTVPS 253>NP_001755 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IVVPSLM 9 I+VPSL+ Sbjct: 308 IIVPSLL 314>NP_003928 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VNIVVPS 7 VNI+ PS Sbjct: 388 VNIITPS 394>NP_073588 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VNIVVPS 7 VN+ VPS Sbjct: 247 VNVTVPS 253>XP_005259168 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VNIVVPSL 8 V++VVP+L Sbjct: 319 VSVVVPTL 326>XP_006723005 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VNIVVPSLM 9 +N+V PS++ Sbjct: 248 INVVKPSII 256>XP_005248296 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NIVVPSL 8 +IVVPSL Sbjct: 617 DIVVPSL 623>XP_005248295 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NIVVPSL 8 +IVVPSL Sbjct: 732 DIVVPSL 738>XP_006710665 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VNIVVPS 7 +N+VVP+ Sbjct: 9 INVVVPA 15>NP_009208 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NIVVPSL 8 +IVVPSL Sbjct: 732 DIVVPSL 738Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.141 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 644,080 Number of extensions: 796 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |