Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 21 229 XP_006718908 21 229 XP_005271621 21 229 XP_006718907 21 229 XP_006718906 21 229 XP_005271619 21 229 XP_005271618 21 229 NP_062823 18 1935 XP_006723348 18 1935 XP_006723347 18 1935 NP_004251 17 2528 NP_066010 17 3301 NP_036376 17 3301 NP_076945 17 4312 XP_005270204 17 4312 NP_001070665 16 7355 NP_058649 16 7355 NP_060140 16 7355 NP_057565 16 7355 NP_002174 16 7355 NP_001254642 16 7355 NP_001017981 16 7355 XP_005274838 16 7355 XP_005274837 16 7355 XP_005274489 16 7355 XP_005274488 16 7355 XP_006720778 16 7355 XP_006720777 16 7355 XP_006720776 16 7355 XP_006720775 16 7355 XP_005252107 16 7355 XP_005252106 16 7355 XP_005252105 16 7355 XP_005252104 16 7355 XP_006712096 16 7355 XP_006712095 16 7355 XP_005264430 16 7355 XP_006712094 16 7355 XP_006712093 16 7355 XP_005264429 16 7355 NP_060022 16 7355 NP_001229267 16 7355 NP_001017420 15 9605 NP_055816 15 9605 NP_001010870 15 9605 NP_001161831 15 9605 NP_079037 15 9605 XP_006716360 15 9605>NP_000042 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMQQVFPMC 9 VMQQVF MC Sbjct: 2727 VMQQVFQMC 2735>XP_006718908 Length = 1708 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMQQVFPMC 9 VMQQVF MC Sbjct: 1379 VMQQVFQMC 1387>XP_005271621 Length = 2708 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMQQVFPMC 9 VMQQVF MC Sbjct: 2379 VMQQVFQMC 2387>XP_006718907 Length = 3050 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMQQVFPMC 9 VMQQVF MC Sbjct: 2721 VMQQVFQMC 2729>XP_006718906 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMQQVFPMC 9 VMQQVF MC Sbjct: 2727 VMQQVFQMC 2735>XP_005271619 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMQQVFPMC 9 VMQQVF MC Sbjct: 2727 VMQQVFQMC 2735>XP_005271618 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMQQVFPMC 9 VMQQVF MC Sbjct: 2727 VMQQVFQMC 2735>NP_062823 Length = 523 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VMQQVFPMC 9 V+Q VFP C Sbjct: 146 VLQPVFPNC 154>XP_006723348 Length = 394 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VMQQVFPMC 9 V+Q VFP C Sbjct: 17 VLQPVFPNC 25>XP_006723347 Length = 444 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VMQQVFPMC 9 V+Q VFP C Sbjct: 146 VLQPVFPNC 154>NP_004251 Length = 1208 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMQQVFPMC 9 ++Q+VFP C Sbjct: 845 LVQRVFPAC 853>NP_066010 Length = 1232 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VMQQVFPM 8 ++QQVFP+ Sbjct: 204 IIQQVFPV 211>NP_036376 Length = 535 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VMQQVFPMC 9 V+Q +FP C Sbjct: 146 VLQPLFPTC 154>NP_076945 Length = 287 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VMQQVFPMC 9 V+ +VFP C Sbjct: 151 VLLEVFPTC 159>XP_005270204 Length = 287 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VMQQVFPMC 9 V+ +VFP C Sbjct: 151 VLLEVFPTC 159>NP_001070665 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 VMQQVFPMC 9 VMQ P C Sbjct: 108 VMQMYLPFC 116>NP_058649 Length = 933 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 VMQQVFPMC 9 VMQ P C Sbjct: 358 VMQMYLPFC 366>NP_060140 Length = 271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QQVFPMC 9 Q+V PMC Sbjct: 206 QEVEPMC 212>NP_057565 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MQQVFPM 8 +QQ FPM Sbjct: 240 IQQAFPM 246>NP_002174 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMQQVFP 7 VMQ++FP Sbjct: 330 VMQRLFP 336>NP_001254642 Length = 300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMQQVFP 7 VMQ++FP Sbjct: 252 VMQRLFP 258>NP_001017981 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VMQQVFPMC 9 ++QQ P+C Sbjct: 357 MLQQTCPLC 365>XP_005274838 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMQQVFP 7 VMQ++FP Sbjct: 329 VMQRLFP 335>XP_005274837 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMQQVFP 7 VMQ++FP Sbjct: 330 VMQRLFP 336>XP_005274489 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMQQVFP 7 VMQ++FP Sbjct: 329 VMQRLFP 335>XP_005274488 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMQQVFP 7 VMQ++FP Sbjct: 330 VMQRLFP 336>XP_006720778 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VMQQVFP 7 V QQVFP Sbjct: 72 VHQQVFP 78>XP_006720777 Length = 292 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VMQQVFP 7 V QQVFP Sbjct: 106 VHQQVFP 112>XP_006720776 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VMQQVFP 7 V QQVFP Sbjct: 189 VHQQVFP 195>XP_006720775 Length = 497 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VMQQVFP 7 V QQVFP Sbjct: 311 VHQQVFP 317>XP_005252107 Length = 295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MQQVFPM 8 +QQ FPM Sbjct: 94 IQQAFPM 100>XP_005252106 Length = 295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MQQVFPM 8 +QQ FPM Sbjct: 94 IQQAFPM 100>XP_005252105 Length = 295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MQQVFPM 8 +QQ FPM Sbjct: 94 IQQAFPM 100>XP_005252104 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MQQVFPM 8 +QQ FPM Sbjct: 240 IQQAFPM 246>XP_006712096 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMQQVFP 7 V+Q+VFP Sbjct: 37 VLQKVFP 43>XP_006712095 Length = 849 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMQQVFP 7 V+Q+VFP Sbjct: 707 VLQKVFP 713>XP_005264430 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMQQVFP 7 V+Q+VFP Sbjct: 279 VLQKVFP 285>XP_006712094 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMQQVFP 7 V+Q+VFP Sbjct: 707 VLQKVFP 713>XP_006712093 Length = 1460 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMQQVFP 7 V+Q+VFP Sbjct: 707 VLQKVFP 713>XP_005264429 Length = 1472 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMQQVFP 7 V+Q+VFP Sbjct: 707 VLQKVFP 713>NP_060022 Length = 1458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMQQVFP 7 V+Q+VFP Sbjct: 693 VLQKVFP 699>NP_001229267 Length = 1453 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMQQVFP 7 V+Q+VFP Sbjct: 693 VLQKVFP 699>NP_001017420 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 QQVFPMC 9 QQV P C Sbjct: 466 QQVVPKC 472>NP_055816 Length = 3664 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 QVFPMC 9 Q+FP C Sbjct: 3627 QIFPPC 3632>NP_001010870 Length = 2096 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 VMQQVFPMC 9 V Q FP C Sbjct: 1627 VPMQAFPCC 1635>NP_001161831 Length = 2066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 VMQQVFPMC 9 V Q FP C Sbjct: 1627 VPMQAFPCC 1635>NP_079037 Length = 216 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 3 QQVFPMC 9 +++FP C Sbjct: 132 EEIFPTC 138>XP_006716360 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 QQVFPMC 9 QQV P C Sbjct: 466 QQVVPKC 472Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.347 0.141 0.509 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 499,575 Number of extensions: 600 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |