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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_733751                                                              20     509
XP_006716142                                                           20     509
XP_005250088                                                           20     509
XP_006716141                                                           20     509
XP_005250085                                                           20     509
XP_006716140                                                           20     509
XP_005250084                                                           20     509
XP_005250083                                                           20     509
XP_005250082                                                           20     509
NP_003473                                                              17    2528
XP_006719679                                                           17    2528
XP_005269219                                                           17    2528
XP_006719678                                                           17    2528
XP_006719677                                                           17    2528
NP_001072996                                                           15    9605

>NP_733751
          Length = 4911

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    VMKAKMVAL 9
            +MKAKMVAL
Sbjct: 3096 IMKAKMVAL 3104



>XP_006716142
          Length = 4927

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    VMKAKMVAL 9
            +MKAKMVAL
Sbjct: 3113 IMKAKMVAL 3121



>XP_005250088
          Length = 4928

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    VMKAKMVAL 9
            +MKAKMVAL
Sbjct: 3113 IMKAKMVAL 3121



>XP_006716141
          Length = 4959

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    VMKAKMVAL 9
            +MKAKMVAL
Sbjct: 3113 IMKAKMVAL 3121



>XP_005250085
          Length = 4979

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    VMKAKMVAL 9
            +MKAKMVAL
Sbjct: 3113 IMKAKMVAL 3121



>XP_006716140
          Length = 4982

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    VMKAKMVAL 9
            +MKAKMVAL
Sbjct: 3113 IMKAKMVAL 3121



>XP_005250084
          Length = 4982

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    VMKAKMVAL 9
            +MKAKMVAL
Sbjct: 3113 IMKAKMVAL 3121



>XP_005250083
          Length = 4982

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    VMKAKMVAL 9
            +MKAKMVAL
Sbjct: 3112 IMKAKMVAL 3120



>XP_005250082
          Length = 4983

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    VMKAKMVAL 9
            +MKAKMVAL
Sbjct: 3113 IMKAKMVAL 3121



>NP_003473
          Length = 5537

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1    VMKAKMVAL 9
            + KAKMVAL
Sbjct: 3424 IAKAKMVAL 3432



>XP_006719679
          Length = 5536

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1    VMKAKMVAL 9
            + KAKMVAL
Sbjct: 3423 IAKAKMVAL 3431



>XP_005269219
          Length = 5537

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1    VMKAKMVAL 9
            + KAKMVAL
Sbjct: 3424 IAKAKMVAL 3432



>XP_006719678
          Length = 5539

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1    VMKAKMVAL 9
            + KAKMVAL
Sbjct: 3426 IAKAKMVAL 3434



>XP_006719677
          Length = 5540

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1    VMKAKMVAL 9
            + KAKMVAL
Sbjct: 3427 IAKAKMVAL 3435



>NP_001072996
          Length = 99

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  VMKAKMVA 8
          + KAKMVA
Sbjct: 68 LFKAKMVA 75



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.335    0.129    0.297 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 196,426
Number of extensions: 148
Number of successful extensions: 15
Number of sequences better than 10000.0: 15
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 15
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.5 bits)
S2: 28 (15.4 bits)