Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 869 XP_006716142 19 869 XP_005250088 19 869 XP_006716141 19 869 XP_005250085 19 869 XP_006716140 19 869 XP_005250084 19 869 XP_005250083 19 869 XP_005250082 19 869 NP_569713 16 5631 NP_001078921 16 7355 NP_004954 16 7355 NP_254273 16 7355 NP_001139644 16 7355 NP_006828 16 7355 NP_001139645 16 7355 NP_001159609 16 7355 NP_001076593 16 7355 XP_006717297 16 7355 XP_005272574 16 7355 NP_001138596 16 7355 NP_001138668 16 7355 NP_002793 16 7355 NP_059111 15 9605 NP_001244123 15 9605 NP_001244124 15 9605 NP_006624 15 9605 NP_001272389 15 9605 NP_443163 15 9605 NP_001171643 15 9605 NP_001154994 15 9605 NP_009177 15 9605 NP_001154993 15 9605 XP_005248470 15 9605 XP_006714585 15 9605 XP_005248468 15 9605 XP_005248467 15 9605 XP_005248466 15 9605 XP_005262767 15 9605 XP_006714137 15 9605>NP_733751 Length = 4911 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMESVALPL 9 VMESV LPL Sbjct: 688 VMESVTLPL 696>XP_006716142 Length = 4927 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMESVALPL 9 VMESV LPL Sbjct: 689 VMESVTLPL 697>XP_005250088 Length = 4928 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMESVALPL 9 VMESV LPL Sbjct: 689 VMESVTLPL 697>XP_006716141 Length = 4959 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMESVALPL 9 VMESV LPL Sbjct: 689 VMESVTLPL 697>XP_005250085 Length = 4979 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMESVALPL 9 VMESV LPL Sbjct: 689 VMESVTLPL 697>XP_006716140 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMESVALPL 9 VMESV LPL Sbjct: 689 VMESVTLPL 697>XP_005250084 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMESVALPL 9 VMESV LPL Sbjct: 689 VMESVTLPL 697>XP_005250083 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMESVALPL 9 VMESV LPL Sbjct: 688 VMESVTLPL 696>XP_005250082 Length = 4983 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMESVALPL 9 VMESV LPL Sbjct: 689 VMESVTLPL 697>NP_569713 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VMESVALPL 9 V+E+V LPL Sbjct: 257 VLENVRLPL 265>NP_001078921 Length = 1361 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ESVALPL 9 +SVALPL Sbjct: 255 DSVALPL 261>NP_004954 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 MESVALPL 9 MES LPL Sbjct: 953 MESTGLPL 960>NP_254273 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMESVALPL 9 + ES++LPL Sbjct: 34 LQESISLPL 42>NP_001139644 Length = 198 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMESVALPL 9 + ES++LPL Sbjct: 34 LQESISLPL 42>NP_006828 Length = 334 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMESVALPL 9 +M+S ALP+ Sbjct: 92 IMDSFALPV 100>NP_001139645 Length = 111 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMESVALPL 9 + ES++LPL Sbjct: 34 LQESISLPL 42>NP_001159609 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ESVALPL 9 +SVALPL Sbjct: 247 DSVALPL 253>NP_001076593 Length = 1347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ESVALPL 9 +SVALPL Sbjct: 241 DSVALPL 247>XP_006717297 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ESVALPL 9 +SVALPL Sbjct: 247 DSVALPL 253>XP_005272574 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ESVALPL 9 +SVALPL Sbjct: 253 DSVALPL 259>NP_001138596 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ESVALPL 9 +SVALPL Sbjct: 253 DSVALPL 259>NP_001138668 Length = 1343 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ESVALPL 9 +SVALPL Sbjct: 241 DSVALPL 247>NP_002793 Length = 440 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VMESVALPL 9 + ESV LPL Sbjct: 197 IKESVELPL 205>NP_059111 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VMESVALPL 9 +ME V LPL Sbjct: 235 LMEHVRLPL 243>NP_001244123 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VMESVALPL 9 +ME V LPL Sbjct: 203 LMEHVRLPL 211>NP_001244124 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VMESVALPL 9 +ME V LPL Sbjct: 153 LMEHVRLPL 161>NP_006624 Length = 1575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MESVALP 8 MES+ LP Sbjct: 120 MESIGLP 126>NP_001272389 Length = 1525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MESVALP 8 MES+ LP Sbjct: 70 MESIGLP 76>NP_443163 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ESVALPL 9 ESV LPL Sbjct: 36 ESVTLPL 42>NP_001171643 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ESVALPL 9 ESV LPL Sbjct: 36 ESVTLPL 42>NP_001154994 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VMESVALPL 9 +ME V LPL Sbjct: 153 LMEHVRLPL 161>NP_009177 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VMESVALPL 9 +ME V LPL Sbjct: 241 LMEHVRLPL 249>NP_001154993 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VMESVALPL 9 +ME V LPL Sbjct: 245 LMEHVRLPL 253>XP_005248470 Length = 1518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MESVALP 8 MES+ LP Sbjct: 120 MESIGLP 126>XP_006714585 Length = 1525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MESVALP 8 MES+ LP Sbjct: 70 MESIGLP 76>XP_005248468 Length = 1548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MESVALP 8 MES+ LP Sbjct: 93 MESIGLP 99>XP_005248467 Length = 1548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MESVALP 8 MES+ LP Sbjct: 93 MESIGLP 99>XP_005248466 Length = 1565 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MESVALP 8 MES+ LP Sbjct: 110 MESIGLP 116>XP_005262767 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VMESVALPL 9 +ME V LPL Sbjct: 153 LMEHVRLPL 161>XP_006714137 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VMESVALPL 9 +ME V LPL Sbjct: 241 LMEHVRLPL 249Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.132 0.336 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 407,707 Number of extensions: 739 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |