Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 17 2528 NP_001035957 17 2528 XP_006721991 17 2528 XP_006721990 17 2528 XP_006721989 17 2528 XP_005258041 17 2528 XP_006721988 17 2528 XP_006721987 17 2528 XP_006721986 17 2528 XP_005258040 17 2528 XP_006721985 17 2528 NP_001191339 17 4312 NP_002994 17 4312 NP_055507 17 4312 NP_001137473 17 4312 NP_001137471 17 4312 NP_001137470 17 4312 NP_001191337 17 4312 NP_001034662 17 4312 NP_660187 16 5631 NP_149163 16 5631 NP_115972 16 5631 NP_150229 16 5631 NP_005679 16 5631 XP_005247116 16 5631 XP_005247115 16 5631 NP_001035829 15 9605 NP_001166996 15 9605 NP_004591 15 9605 NP_001166995 15 9605 NP_001035828 15 9605 XP_006711560 15 9605 XP_006711559 15 9605 XP_006711558 15 9605>NP_000258 Length = 2818 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 VMALLR IE Sbjct: 759 VMALLRRIE 767>NP_001035957 Length = 2839 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 VMALLR IE Sbjct: 759 VMALLRRIE 767>XP_006721991 Length = 1632 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 VMALLR IE Sbjct: 769 VMALLRRIE 777>XP_006721990 Length = 2823 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 VMALLR IE Sbjct: 769 VMALLRRIE 777>XP_006721989 Length = 2823 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 VMALLR IE Sbjct: 769 VMALLRRIE 777>XP_005258041 Length = 2836 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 VMALLR IE Sbjct: 759 VMALLRRIE 767>XP_006721988 Length = 2846 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 VMALLR IE Sbjct: 769 VMALLRRIE 777>XP_006721987 Length = 2849 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 VMALLR IE Sbjct: 769 VMALLRRIE 777>XP_006721986 Length = 2854 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 VMALLR IE Sbjct: 756 VMALLRRIE 764>XP_005258040 Length = 2857 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 VMALLR IE Sbjct: 759 VMALLRRIE 767>XP_006721985 Length = 2867 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 VMALLR IE Sbjct: 769 VMALLRRIE 777>NP_001191339 Length = 715 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 V ALLR+IE Sbjct: 411 VKALLRIIE 419>NP_002994 Length = 715 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 V ALLR+IE Sbjct: 411 VKALLRIIE 419>NP_055507 Length = 696 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 V ALLR+IE Sbjct: 398 VKALLRMIE 406>NP_001137473 Length = 681 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 V ALLR+IE Sbjct: 377 VKALLRIIE 385>NP_001137471 Length = 715 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 V ALLR+IE Sbjct: 411 VKALLRIIE 419>NP_001137470 Length = 715 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 V ALLR+IE Sbjct: 411 VKALLRIIE 419>NP_001191337 Length = 719 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 V ALLR+IE Sbjct: 411 VKALLRIIE 419>NP_001034662 Length = 719 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VMALLRLIE 9 V ALLR+IE Sbjct: 411 VKALLRIIE 419>NP_660187 Length = 1344 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MALLRLIE 9 MAL RL+E Sbjct: 1186 MALFRLVE 1193>NP_149163 Length = 1382 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MALLRLIE 9 MAL RL+E Sbjct: 1186 MALFRLVE 1193>NP_115972 Length = 1382 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MALLRLIE 9 MAL RL+E Sbjct: 1186 MALFRLVE 1193>NP_150229 Length = 1359 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MALLRLIE 9 MAL RL+E Sbjct: 1165 MALFRLVE 1172>NP_005679 Length = 1437 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MALLRLIE 9 MAL RL+E Sbjct: 1238 MALFRLVE 1245>XP_005247116 Length = 1437 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MALLRLIE 9 MAL RL+E Sbjct: 1238 MALFRLVE 1245>XP_005247115 Length = 1437 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MALLRLIE 9 MAL RL+E Sbjct: 1238 MALFRLVE 1245>NP_001035829 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLRLIE 9 AL+RLIE Sbjct: 60 ALIRLIE 66>NP_001166996 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLRLIE 9 AL+RLIE Sbjct: 60 ALIRLIE 66>NP_004591 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLRLIE 9 AL+RLIE Sbjct: 60 ALIRLIE 66>NP_001166995 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLRLIE 9 AL+RLIE Sbjct: 60 ALIRLIE 66>NP_001035828 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLRLIE 9 AL+RLIE Sbjct: 60 ALIRLIE 66>XP_006711560 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLRLIE 9 AL+RLIE Sbjct: 60 ALIRLIE 66>XP_006711559 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLRLIE 9 AL+RLIE Sbjct: 60 ALIRLIE 66>XP_006711558 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLRLIE 9 AL+RLIE Sbjct: 60 ALIRLIE 66Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.346 0.156 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 292,568 Number of extensions: 302 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |