Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 19 665 NP_004561 19 665 NP_001275703 19 665 XP_005253450 19 665 XP_006719151 19 665 NP_006648 17 3301 NP_996848 17 3301 XP_006724024 17 3301 NP_001005329 17 3301 NP_001004748 17 3301 NP_689914 17 4312 XP_006720120 17 4312 XP_006720119 17 4312 NP_689659 17 4312 NP_775184 16 5631 NP_751945 16 5631 NP_001241681 16 5631 NP_001029288 16 5631 NP_115945 16 5631 NP_056451 16 5631 NP_689562 16 5631 NP_060862 16 5631 XP_006716715 16 5631 XP_005263172 16 5631 XP_006712195 16 5631 XP_005264689 16 5631 NP_996879 16 7355 NP_065433 16 7355 NP_001136123 16 7355 NP_065749 16 7355 NP_071338 16 7355 NP_001014980 16 7355 XP_005269098 16 7355 XP_005269097 16 7355 XP_005269096 16 7355 XP_006717983 16 7355 XP_005270036 16 7355 XP_005270035 16 7355 XP_006710494 16 7355 XP_006710492 16 7355 XP_006710491 16 7355 XP_006710490 16 7355 XP_006710489 16 7355 NP_942090 16 7355 NP_001004749 16 7355 NP_115785 15 9605 NP_079472 15 9605 NP_071942 15 9605 NP_001004485 15 9605>NP_001275701 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLVCVETKQ 9 VL CVETKQ Sbjct: 440 VLGCVETKQ 448>NP_004561 Length = 1445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLVCVETKQ 9 VL CVETKQ Sbjct: 440 VLGCVETKQ 448>NP_001275703 Length = 1264 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLVCVETKQ 9 VL CVETKQ Sbjct: 218 VLGCVETKQ 226>XP_005253450 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLVCVETKQ 9 VL CVETKQ Sbjct: 440 VLGCVETKQ 448>XP_006719151 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLVCVETKQ 9 VL CVETKQ Sbjct: 440 VLGCVETKQ 448>NP_006648 Length = 541 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLVCVETKQ 9 VL C+ET+Q Sbjct: 532 VLDCLETRQ 540>NP_996848 Length = 541 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLVCVETKQ 9 VL C+ET+Q Sbjct: 532 VLDCLETRQ 540>XP_006724024 Length = 584 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLVCVETKQ 9 VL C+ET+Q Sbjct: 575 VLDCLETRQ 583>NP_001005329 Length = 313 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLVCVETKQ 9 ++ CV+TKQ Sbjct: 291 IVYCVKTKQ 299>NP_001004748 Length = 313 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLVCVETKQ 9 ++ CV+TKQ Sbjct: 291 IVYCVKTKQ 299>NP_689914 Length = 5058 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLVCVET 7 VL+C+ET Sbjct: 465 VLICLET 471>XP_006720120 Length = 1055 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVCVETKQ 9 L+C+ET+Q Sbjct: 778 LLCLETEQ 785>XP_006720119 Length = 1094 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVCVETKQ 9 L+C+ET+Q Sbjct: 817 LLCLETEQ 824>NP_689659 Length = 1094 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LVCVETKQ 9 L+C+ET+Q Sbjct: 817 LLCLETEQ 824>NP_775184 Length = 152 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVCVETKQ 9 L CVET++ Sbjct: 68 LACVETEE 75>NP_751945 Length = 543 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VLVCVET 7 VLVC ET Sbjct: 454 VLVCCET 460>NP_001241681 Length = 140 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVCVETKQ 9 L C+ET+Q Sbjct: 124 LNCIETRQ 131>NP_001029288 Length = 523 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VLVCVET 7 VLVC ET Sbjct: 434 VLVCCET 440>NP_115945 Length = 152 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVCVETKQ 9 L CVET++ Sbjct: 68 LACVETEE 75>NP_056451 Length = 522 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VLVCVET 7 VLVC ET Sbjct: 433 VLVCCET 439>NP_689562 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CVETKQ 9 C+ETKQ Sbjct: 262 CLETKQ 267>NP_060862 Length = 2104 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLVCVETKQ 9 +L CV T+Q Sbjct: 2005 ILSCVRTRQ 2013>XP_006716715 Length = 161 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVCVETKQ 9 L C+ET+Q Sbjct: 124 LNCIETRQ 131>XP_005263172 Length = 2104 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLVCVETKQ 9 +L CV T+Q Sbjct: 2005 ILSCVRTRQ 2013>XP_006712195 Length = 507 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VLVCVET 7 VLVC ET Sbjct: 418 VLVCCET 424>XP_005264689 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VLVCVET 7 VLVC ET Sbjct: 419 VLVCCET 425>NP_996879 Length = 2223 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VCVETKQ 9 +C+E+KQ Sbjct: 1742 LCIESKQ 1748>NP_065433 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VLVCVET 7 +LVC+E+ Sbjct: 94 ILVCIES 100>NP_001136123 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVCVETKQ 9 L+CV+T Q Sbjct: 406 LLCVDTTQ 413>NP_065749 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VLVCVET 7 +LVCV T Sbjct: 425 ILVCVST 431>NP_071338 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VCVETKQ 9 VCV T+Q Sbjct: 400 VCVNTRQ 406>NP_001014980 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VLVCVET 7 VL+C+E+ Sbjct: 232 VLICIES 238>XP_005269098 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VLVCVET 7 +LVCV T Sbjct: 394 ILVCVST 400>XP_005269097 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VLVCVET 7 +LVCV T Sbjct: 394 ILVCVST 400>XP_005269096 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VLVCVET 7 +LVCV T Sbjct: 394 ILVCVST 400>XP_006717983 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVCVETKQ 9 L+C +TKQ Sbjct: 68 LLCEQTKQ 75>XP_005270036 Length = 1113 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVCVETKQ 9 L+C +TKQ Sbjct: 68 LLCEQTKQ 75>XP_005270035 Length = 1189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVCVETKQ 9 L+C +TKQ Sbjct: 68 LLCEQTKQ 75>XP_006710494 Length = 1152 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VCVETKQ 9 +C+E+KQ Sbjct: 671 LCIESKQ 677>XP_006710492 Length = 1351 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VCVETKQ 9 +C+E+KQ Sbjct: 870 LCIESKQ 876>XP_006710491 Length = 1496 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VCVETKQ 9 +C+E+KQ Sbjct: 1015 LCIESKQ 1021>XP_006710490 Length = 2158 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VCVETKQ 9 +C+E+KQ Sbjct: 1677 LCIESKQ 1683>XP_006710489 Length = 2185 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VCVETKQ 9 +C+E+KQ Sbjct: 1704 LCIESKQ 1710>NP_942090 Length = 1189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVCVETKQ 9 L+C +TKQ Sbjct: 68 LLCEQTKQ 75>NP_001004749 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLVCVETKQ 9 ++ CV+T+Q Sbjct: 289 IVYCVKTRQ 297>NP_115785 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 CVETK 8 CVETK Sbjct: 549 CVETK 553>NP_079472 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LVCVETKQ 9 L+C TKQ Sbjct: 26 LLCTATKQ 33>NP_071942 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLVCVETK 8 VLV VETK Sbjct: 86 VLVDVETK 93>NP_001004485 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LVCVET 7 LVCV+T Sbjct: 187 LVCVDT 192Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.133 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 654,406 Number of extensions: 784 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |