Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 390 NP_001035957 20 390 XP_006721990 20 390 XP_006721989 20 390 XP_005258041 20 390 XP_006721988 20 390 XP_006721987 20 390 XP_006721986 20 390 XP_005258040 20 390 XP_006721985 20 390 NP_001186918 17 2528 NP_005981 17 3301 NP_000101 17 4312 XP_006710460 17 4312 XP_005270619 17 4312 NP_001193499 16 5631 NP_001013049 16 5631 NP_001193501 16 5631 NP_443150 16 5631 NP_001193500 16 5631 NP_001193498 16 5631 NP_001035700 16 5631 NP_078856 16 5631 XP_005269532 16 5631 NP_001182180 16 7355 NP_778239 16 7355 NP_001182181 16 7355 NP_008825 16 7355 NP_001153699 16 7355 NP_001002294 16 7355 NP_079413 16 7355 NP_001182183 16 7355 NP_001182178 16 7355 NP_778243 16 7355 NP_001182179 16 7355 NP_001182177 16 7355 NP_001027450 16 7355 NP_005124 16 7355 XP_006720764 16 7355 XP_005254752 16 7355 XP_006720763 16 7355 XP_006720762 16 7355 XP_005254751 16 7355 XP_006716855 16 7355 XP_006716854 16 7355 XP_005245101 16 7355 NP_000145 15 9605 NP_001166 15 9605 NP_000572 15 9605 NP_000607 15 9605 NP_001181943 15 9605 NP_000043 15 9605 NP_001269153 15 9605 NP_005520 15 9605 NP_002644 15 9605 NP_001123553 15 9605 NP_076991 15 9605 NP_065772 15 9605 NP_002653 15 9605 NP_002074 15 9605 XP_006724837 15 9605 XP_005256858 15 9605 XP_005247591 15 9605 XP_005247590 15 9605 XP_006710661 15 9605 XP_005245920 15 9605 XP_006710660 15 9605 XP_006710659 15 9605 XP_006710658 15 9605 XP_006710657 15 9605>NP_000258 Length = 2818 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 VLTDPKIQ Sbjct: 2588 VLTDPKIQ 2595>NP_001035957 Length = 2839 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 VLTDPKIQ Sbjct: 2609 VLTDPKIQ 2616>XP_006721990 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 VLTDPKIQ Sbjct: 2619 VLTDPKIQ 2626>XP_006721989 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 VLTDPKIQ Sbjct: 2619 VLTDPKIQ 2626>XP_005258041 Length = 2836 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 VLTDPKIQ Sbjct: 2588 VLTDPKIQ 2595>XP_006721988 Length = 2846 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 VLTDPKIQ Sbjct: 2598 VLTDPKIQ 2605>XP_006721987 Length = 2849 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 VLTDPKIQ Sbjct: 2619 VLTDPKIQ 2626>XP_006721986 Length = 2854 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 VLTDPKIQ Sbjct: 2606 VLTDPKIQ 2613>XP_005258040 Length = 2857 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 VLTDPKIQ Sbjct: 2609 VLTDPKIQ 2616>XP_006721985 Length = 2867 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 VLTDPKIQ Sbjct: 2619 VLTDPKIQ 2626>NP_001186918 Length = 122 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLTDPKIQV 9 +LTDP+ QV Sbjct: 93 ILTDPRHQV 101>NP_005981 Length = 968 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LTDPKIQV 9 LT+P+IQV Sbjct: 129 LTEPQIQV 136>NP_000101 Length = 1025 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 VL+DPK++ Sbjct: 441 VLSDPKVK 448>XP_006710460 Length = 889 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 VL+DPK++ Sbjct: 441 VLSDPKVK 448>XP_005270619 Length = 953 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 VL+DPK++ Sbjct: 441 VLSDPKVK 448>NP_001193499 Length = 1130 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 +LTDP+I+ Sbjct: 245 LLTDPEIE 252>NP_001013049 Length = 1198 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 +LTDP+I+ Sbjct: 245 LLTDPEIE 252>NP_001193501 Length = 1179 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 +LTDP+I+ Sbjct: 245 LLTDPEIE 252>NP_443150 Length = 1168 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 +LTDP+I+ Sbjct: 245 LLTDPEIE 252>NP_001193500 Length = 1159 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 +LTDP+I+ Sbjct: 245 LLTDPEIE 252>NP_001193498 Length = 1179 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 +LTDP+I+ Sbjct: 245 LLTDPEIE 252>NP_001035700 Length = 1069 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TDPKIQV 9 +DPK+Q+ Sbjct: 284 SDPKVQI 290>NP_078856 Length = 1120 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TDPKIQV 9 +DPK+Q+ Sbjct: 335 SDPKVQI 341>XP_005269532 Length = 1068 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLTDPKIQ 8 +LTDP+I+ Sbjct: 245 LLTDPEIE 252>NP_001182180 Length = 292 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 + DPK+QV Sbjct: 175 MQDPKMQV 182>NP_778239 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 + DPK+QV Sbjct: 189 MQDPKMQV 196>NP_001182181 Length = 284 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 + DPK+QV Sbjct: 117 MQDPKMQV 124>NP_008825 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTDPKI 7 LTDPK+ Sbjct: 452 LTDPKL 457>NP_001153699 Length = 2330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTDPKI 7 LTDPK+ Sbjct: 1047 LTDPKL 1052>NP_001002294 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTDPKI 7 LTDPK+ Sbjct: 452 LTDPKL 457>NP_079413 Length = 2443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTDPKI 7 LTDPK+ Sbjct: 1047 LTDPKL 1052>NP_001182183 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 + DPK+QV Sbjct: 121 MQDPKMQV 128>NP_001182178 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 + DPK+QV Sbjct: 175 MQDPKMQV 182>NP_778243 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 + DPK+QV Sbjct: 175 MQDPKMQV 182>NP_001182179 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 + DPK+QV Sbjct: 135 MQDPKMQV 142>NP_001182177 Length = 356 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 + DPK+QV Sbjct: 189 MQDPKMQV 196>NP_001027450 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTDPKI 7 LTDPK+ Sbjct: 198 LTDPKL 203>NP_005124 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTDPKI 7 LTDPK+ Sbjct: 302 LTDPKL 307>XP_006720764 Length = 1584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTDPKI 7 LTDPK+ Sbjct: 1047 LTDPKL 1052>XP_005254752 Length = 2357 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTDPKI 7 LTDPK+ Sbjct: 961 LTDPKL 966>XP_006720763 Length = 2395 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTDPKI 7 LTDPK+ Sbjct: 1047 LTDPKL 1052>XP_006720762 Length = 2397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTDPKI 7 LTDPK+ Sbjct: 1047 LTDPKL 1052>XP_005254751 Length = 2407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTDPKI 7 LTDPK+ Sbjct: 1047 LTDPKL 1052>XP_006716855 Length = 254 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 + DPK+QV Sbjct: 87 MQDPKMQV 94>XP_006716854 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 + DPK+QV Sbjct: 175 MQDPKMQV 182>XP_005245101 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTDPKI 7 LTDPK+ Sbjct: 389 LTDPKL 394>NP_000145 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 L+DPK+ V Sbjct: 213 LSDPKLAV 220>NP_001166 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VLTDPK 6 V+TDPK Sbjct: 58 VVTDPK 63>NP_000572 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VLTDPKI 7 ++TDPK+ Sbjct: 143 LMTDPKL 149>NP_000607 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLTDPKIQV 9 V DPK+Q+ Sbjct: 266 VTQDPKLQM 274>NP_001181943 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLTDPKIQV 9 V DPK+Q+ Sbjct: 87 VTQDPKLQM 95>NP_000043 Length = 1500 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VLTDPKIQ 8 ++ DPK+Q Sbjct: 50 IIYDPKLQ 57>NP_001269153 Length = 1422 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VLTDPKIQ 8 ++ DPK+Q Sbjct: 50 IIYDPKLQ 57>NP_005520 Length = 4391 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 L+DP +Q+ Sbjct: 1430 LSDPDVQI 1437>NP_002644 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LTDPKIQV 9 LT+P+++V Sbjct: 128 LTEPRVRV 135>NP_001123553 Length = 1036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TDPKIQ 8 +DPKIQ Sbjct: 47 SDPKIQ 52>NP_076991 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLTDPKIQ 8 +LTD K+Q Sbjct: 349 ILTDLKVQ 356>NP_065772 Length = 1709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTDPKIQ 8 LTDP+I+ Sbjct: 1026 LTDPQIR 1032>NP_002653 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TDPKIQ 8 +DPKIQ Sbjct: 47 SDPKIQ 52>NP_002074 Length = 190 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VLTDPKI 7 ++TDPK+ Sbjct: 133 LMTDPKL 139>XP_006724837 Length = 1533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTDPKIQ 8 LTDP+I+ Sbjct: 850 LTDPQIR 856>XP_005256858 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLTDPKIQ 8 +LTD K+Q Sbjct: 131 ILTDLKVQ 138>XP_005247591 Length = 1036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TDPKIQ 8 +DPKIQ Sbjct: 47 SDPKIQ 52>XP_005247590 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TDPKIQ 8 +DPKIQ Sbjct: 47 SDPKIQ 52>XP_006710661 Length = 4057 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 L+DP +Q+ Sbjct: 1613 LSDPDVQI 1620>XP_005245920 Length = 4392 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 L+DP +Q+ Sbjct: 1431 LSDPDVQI 1438>XP_006710660 Length = 4397 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 L+DP +Q+ Sbjct: 1430 LSDPDVQI 1437>XP_006710659 Length = 4556 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 L+DP +Q+ Sbjct: 1589 LSDPDVQI 1596>XP_006710658 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 L+DP +Q+ Sbjct: 1596 LSDPDVQI 1603>XP_006710657 Length = 4579 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTDPKIQV 9 L+DP +Q+ Sbjct: 1612 LSDPDVQI 1619Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.140 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 741,915 Number of extensions: 919 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |