Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_073585 17 4312 NP_056098 17 4312 NP_001073883 16 5631 XP_006724219 16 5631 XP_006724218 16 5631 XP_006724217 16 5631 XP_005267748 16 5631 NP_689726 16 5631 NP_001871 16 7355 NP_001243022 16 7355 NP_001243021 16 7355 NP_001243019 16 7355 NP_001243020 16 7355 NP_003010 16 7355 NP_001036068 16 7355 NP_006847 16 7355 XP_006723231 16 7355 XP_005258877 16 7355 XP_005258876 16 7355 XP_006719266 16 7355 XP_005268644 16 7355 XP_006719265 16 7355 NP_001123532 16 7355 NP_054756 16 7355 NP_001360 15 9605 NP_001609 15 9605 NP_060290 15 9605 NP_001138501 15 9605 NP_689691 15 9605 NP_075068 15 9605 NP_001254 15 9605 NP_001268358 15 9605 NP_612380 15 9605 XP_005258616 15 9605 XP_005258615 15 9605 XP_005258567 15 9605 XP_006722388 15 9605 XP_005269285 15 9605 XP_005269283 15 9605 XP_006719754 15 9605 XP_006719753 15 9605 XP_005269281 15 9605 XP_006717224 15 9605 XP_006717221 15 9605 XP_006717220 15 9605 XP_006717219 15 9605 XP_006717218 15 9605 XP_006717217 15 9605 XP_006717216 15 9605 XP_006717215 15 9605 XP_006717214 15 9605 XP_005248319 15 9605 XP_005262744 15 9605 NP_001153332 15 9605 NP_001153333 15 9605 NP_055416 15 9605 NP_789780 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLQQLIVAH 9 VL+QLIVAH Sbjct: 1713 VLEQLIVAH 1721>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLQQLIVAH 9 VL+QLIVAH Sbjct: 1713 VLEQLIVAH 1721>NP_073585 Length = 1445 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QQLIVAH 9 QQ++VAH Sbjct: 593 QQMVVAH 599>NP_056098 Length = 675 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLQQLIVAH 9 VLQ L+V H Sbjct: 221 VLQMLLVTH 229>NP_001073883 Length = 2028 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VLQQLIV 7 VLQQLIV Sbjct: 92 VLQQLIV 98>XP_006724219 Length = 1157 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLQQLIVAH 9 +LQ+L+V H Sbjct: 772 ILQRLLVEH 780>XP_006724218 Length = 1200 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLQQLIVAH 9 +LQ+L+V H Sbjct: 850 ILQRLLVEH 858>XP_006724217 Length = 1235 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLQQLIVAH 9 +LQ+L+V H Sbjct: 850 ILQRLLVEH 858>XP_005267748 Length = 1535 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VLQQLIV 7 VLQQLIV Sbjct: 92 VLQQLIV 98>NP_689726 Length = 1274 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLQQLIVAH 9 +LQ+L+V H Sbjct: 889 ILQRLLVEH 897>NP_001871 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQQLIVAH 9 L+QL++AH Sbjct: 408 LKQLLLAH 415>NP_001243022 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQQLIVAH 9 L+QL++AH Sbjct: 350 LKQLLLAH 357>NP_001243021 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQQLIVAH 9 L+QL++AH Sbjct: 350 LKQLLLAH 357>NP_001243019 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQQLIVAH 9 L+QL++AH Sbjct: 408 LKQLLLAH 415>NP_001243020 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQQLIVAH 9 L+QL++AH Sbjct: 390 LKQLLLAH 397>NP_003010 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQQLIVA 8 LQQL+VA Sbjct: 300 LQQLVVA 306>NP_001036068 Length = 1690 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLQQLIVAH 9 VL+Q ++AH Sbjct: 450 VLEQSVLAH 458>NP_006847 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQQLIVAH 9 L+QL++AH Sbjct: 388 LKQLLLAH 395>XP_006723231 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQQLIVA 8 LQQL+VA Sbjct: 322 LQQLVVA 328>XP_005258877 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQQLIVA 8 LQQL+VA Sbjct: 322 LQQLVVA 328>XP_005258876 Length = 818 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQQLIVA 8 LQQL+VA Sbjct: 404 LQQLVVA 410>XP_006719266 Length = 451 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQQLIVAH 9 L+QL++AH Sbjct: 356 LKQLLLAH 363>XP_005268644 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQQLIVAH 9 L+QL++AH Sbjct: 388 LKQLLLAH 395>XP_006719265 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQQLIVAH 9 L+QL++AH Sbjct: 388 LKQLLLAH 395>NP_001123532 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQQLIVAH 9 L+QL++AH Sbjct: 367 LKQLLLAH 374>NP_054756 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQQLIVA 8 LQQL+VA Sbjct: 322 LQQLVVA 328>NP_001360 Length = 4624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 ++QLIV H Sbjct: 770 IEQLIVPH 777>NP_001609 Length = 1014 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 LQ+L +AH Sbjct: 469 LQELFLAH 476>NP_060290 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL+V+H Sbjct: 303 LSQLLVSH 310>NP_001138501 Length = 1392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QQLIVAH 9 QQL+ AH Sbjct: 1315 QQLVYAH 1321>NP_689691 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LQQLIVAH 9 L QLI+ H Sbjct: 139 LSQLIITH 146>NP_075068 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLQQLIV 7 +LQQL+V Sbjct: 969 ILQQLVV 975>NP_001254 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLQQLIV 7 VLQQL+V Sbjct: 426 VLQQLLV 432>NP_001268358 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL++AH Sbjct: 240 LSQLLLAH 247>NP_612380 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL++AH Sbjct: 240 LSQLLLAH 247>XP_005258616 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LQQLIVAH 9 L QLI+ H Sbjct: 96 LSQLIITH 103>XP_005258615 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LQQLIVAH 9 L QLI+ H Sbjct: 140 LSQLIITH 147>XP_005258567 Length = 1036 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLQQLIVA 8 VLQ LI+A Sbjct: 770 VLQDLIIA 777>XP_006722388 Length = 1511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QQLIVAH 9 QQL+ AH Sbjct: 1434 QQLVYAH 1440>XP_005269285 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL++AH Sbjct: 240 LSQLLLAH 247>XP_005269283 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL++AH Sbjct: 240 LSQLLLAH 247>XP_006719754 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL++AH Sbjct: 240 LSQLLLAH 247>XP_006719753 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL++AH Sbjct: 240 LSQLLLAH 247>XP_005269281 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL++AH Sbjct: 240 LSQLLLAH 247>XP_006717224 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL+V+H Sbjct: 355 LSQLLVSH 362>XP_006717221 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL+V+H Sbjct: 355 LSQLLVSH 362>XP_006717220 Length = 825 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL+V+H Sbjct: 355 LSQLLVSH 362>XP_006717219 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL+V+H Sbjct: 355 LSQLLVSH 362>XP_006717218 Length = 877 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL+V+H Sbjct: 303 LSQLLVSH 310>XP_006717217 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL+V+H Sbjct: 331 LSQLLVSH 338>XP_006717216 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL+V+H Sbjct: 355 LSQLLVSH 362>XP_006717215 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL+V+H Sbjct: 355 LSQLLVSH 362>XP_006717214 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 L QL+V+H Sbjct: 355 LSQLLVSH 362>XP_005248319 Length = 4609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQQLIVAH 9 ++QLIV H Sbjct: 755 IEQLIVPH 762>XP_005262744 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLQQLIV 7 VLQQL+V Sbjct: 386 VLQQLLV 392>NP_001153332 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LQQLIVAH 9 L QLI+ H Sbjct: 139 LSQLIITH 146>NP_001153333 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LQQLIVAH 9 L QLI+ H Sbjct: 139 LSQLIITH 146>NP_055416 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LQQLIVAH 9 +Q+L++AH Sbjct: 359 MQELLMAH 366>NP_789780 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLQQLIVA 8 VLQ LI+A Sbjct: 770 VLQDLIIA 777Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.143 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 412,230 Number of extensions: 583 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |