Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 665 NP_001075109 19 665 NP_077017 17 3301 NP_775901 16 5631 XP_005266736 16 5631 XP_006722498 16 5631 XP_006722497 16 5631 NP_000072 16 7355 XP_005273087 16 7355 XP_005273086 16 7355 XP_005273085 16 7355 XP_005273084 16 7355 NP_001165088 15 9605 NP_001165074 15 9605 NP_001165077 15 9605 NP_062552 15 9605 NP_001035845 15 9605 NP_006027 15 9605 NP_001035844 15 9605 NP_653285 15 9605 NP_002009 15 9605 NP_001243193 15 9605 NP_001165084 15 9605 NP_001269979 15 9605 NP_001269980 15 9605 NP_001269981 15 9605 NP_056074 15 9605 NP_001243194 15 9605 XP_005261155 15 9605 XP_006723963 15 9605 XP_006723962 15 9605 XP_006723081 15 9605 XP_005256615 15 9605 XP_005256613 15 9605 XP_005256612 15 9605 XP_005264717 15 9605 XP_005264716 15 9605 XP_005264715 15 9605 XP_005264714 15 9605 XP_005264712 15 9605 XP_005264711 15 9605 XP_006712215 15 9605 XP_006712214 15 9605 XP_005264710 15 9605 XP_006710171 15 9605 XP_006710170 15 9605>NP_008835 Length = 4128 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLNSMLDQS 9 VLN MLDQS Sbjct: 1596 VLNGMLDQS 1604>NP_001075109 Length = 4097 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLNSMLDQS 9 VLN MLDQS Sbjct: 1596 VLNGMLDQS 1604>NP_077017 Length = 83 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LNSMLDQ 8 +NSMLDQ Sbjct: 31 INSMLDQ 37>NP_775901 Length = 2226 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLNSMLDQS 9 V+N +LDQS Sbjct: 1418 VVNILLDQS 1426>XP_005266736 Length = 1314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLNSMLDQS 9 V+N +LDQS Sbjct: 506 VVNILLDQS 514>XP_006722498 Length = 2059 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLNSMLDQS 9 V+N +LDQS Sbjct: 1419 VVNILLDQS 1427>XP_006722497 Length = 2227 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLNSMLDQS 9 V+N +LDQS Sbjct: 1419 VVNILLDQS 1427>NP_000072 Length = 3801 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LNSMLDQS 9 LNS++DQ+ Sbjct: 58 LNSIIDQA 65>XP_005273087 Length = 2788 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LNSMLDQS 9 LNS++DQ+ Sbjct: 58 LNSIIDQA 65>XP_005273086 Length = 3264 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LNSMLDQS 9 LNS++DQ+ Sbjct: 58 LNSIIDQA 65>XP_005273085 Length = 3755 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LNSMLDQS 9 LNS++DQ+ Sbjct: 58 LNSIIDQA 65>XP_005273084 Length = 3801 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LNSMLDQS 9 LNS++DQ+ Sbjct: 58 LNSIIDQA 65>NP_001165088 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 499 VLNTMMD 505>NP_001165074 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 588 VLNTMMD 594>NP_001165077 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 588 VLNTMMD 594>NP_062552 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LNSMLDQ 8 LNS+LD+ Sbjct: 197 LNSLLDE 203>NP_001035845 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 522 VLNTMMD 528>NP_006027 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 588 VLNTMMD 594>NP_001035844 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 526 VLNTMMD 532>NP_653285 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LNSMLDQ 8 +NSML+Q Sbjct: 75 INSMLEQ 81>NP_002009 Length = 1269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLNSMLDQS 9 +LN+M D S Sbjct: 1120 ILNTMFDTS 1128>NP_001243193 Length = 1258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLNSMLDQS 9 +LN+M D S Sbjct: 1109 ILNTMFDTS 1117>NP_001165084 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 499 VLNTMMD 505>NP_001269979 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSMLDQS 9 NS+LDQ+ Sbjct: 177 NSLLDQA 183>NP_001269980 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSMLDQS 9 NS+LDQ+ Sbjct: 60 NSLLDQA 66>NP_001269981 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSMLDQS 9 NS+LDQ+ Sbjct: 92 NSLLDQA 98>NP_056074 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSMLDQS 9 NS+LDQ+ Sbjct: 177 NSLLDQA 183>NP_001243194 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLNSMLDQS 9 +LN+M D S Sbjct: 1065 ILNTMFDTS 1073>XP_005261155 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSMLDQS 9 NS+LDQ+ Sbjct: 177 NSLLDQA 183>XP_006723963 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSMLDQS 9 NS+LDQ+ Sbjct: 177 NSLLDQA 183>XP_006723962 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSMLDQS 9 NS+LDQ+ Sbjct: 177 NSLLDQA 183>XP_006723081 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LNSMLDQ 8 +NSML+Q Sbjct: 75 INSMLEQ 81>XP_005256615 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLNSMLDQS 9 +LN+M D S Sbjct: 1119 ILNTMFDTS 1127>XP_005256613 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLNSMLDQS 9 +LN+M D S Sbjct: 1119 ILNTMFDTS 1127>XP_005256612 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLNSMLDQS 9 +LN+M D S Sbjct: 1120 ILNTMFDTS 1128>XP_005264717 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 499 VLNTMMD 505>XP_005264716 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 499 VLNTMMD 505>XP_005264715 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 499 VLNTMMD 505>XP_005264714 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 588 VLNTMMD 594>XP_005264712 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 588 VLNTMMD 594>XP_005264711 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 588 VLNTMMD 594>XP_006712215 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 588 VLNTMMD 594>XP_006712214 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 588 VLNTMMD 594>XP_005264710 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLNSMLD 7 VLN+M+D Sbjct: 588 VLNTMMD 594>XP_006710171 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSMLDQS 9 NS+LDQ+ Sbjct: 177 NSLLDQA 183>XP_006710170 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSMLDQS 9 NS+LDQ+ Sbjct: 177 NSLLDQA 183Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.121 0.287 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 414,131 Number of extensions: 757 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |