Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 20 509 NP_000240 20 509 XP_005265218 20 509 NP_055590 18 1935 NP_001007468 18 1935 NP_001245256 18 1935 NP_001245255 18 1935 NP_001245254 18 1935 XP_006724453 18 1935 XP_005261930 18 1935 XP_006724452 18 1935 XP_005261929 18 1935 XP_005261928 18 1935 XP_005261927 18 1935 XP_006724451 18 1935 XP_005261926 18 1935 XP_005261925 18 1935 NP_612395 16 5631 NP_001122403 16 5631 NP_001258927 16 5631 NP_004569 16 5631 NP_005460 16 5631 XP_006724816 16 5631 XP_006724815 16 5631 XP_006724814 16 5631 XP_005262462 16 5631 XP_005260297 16 5631 XP_005260296 16 5631 XP_005263407 16 5631 XP_005263406 16 5631 XP_006714477 16 5631 XP_006714476 16 5631 NP_057238 16 7355 NP_004167 16 7355 NP_001005291 16 7355 NP_079215 16 7355 NP_003103 16 7355 NP_071402 16 7355 NP_003642 16 7355 XP_006721633 16 7355 XP_005256829 16 7355 XP_006721337 16 7355 XP_006721336 16 7355 XP_005256210 16 7355 XP_005255530 16 7355 XP_005249886 16 7355 XP_005249885 16 7355 NP_001184008 15 9605 NP_001541 15 9605 NP_001007246 15 9605 NP_001184009 15 9605 NP_059523 15 9605 NP_003209 15 9605 NP_064551 15 9605 NP_036379 15 9605 NP_001182531 15 9605 NP_036380 15 9605 NP_006755 15 9605 NP_115606 15 9605 XP_006726481 15 9605 XP_006719700 15 9605 XP_005269242 15 9605 XP_006719699 15 9605 XP_005269241 15 9605 XP_005251349 15 9605 XP_005251348 15 9605 XP_006714573 15 9605 XP_006713765 15 9605>NP_001245200 Length = 687 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLNRIAAGE 9 V+NRIAAGE Sbjct: 15 VVNRIAAGE 23>NP_000240 Length = 756 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLNRIAAGE 9 V+NRIAAGE Sbjct: 15 VVNRIAAGE 23>XP_005265218 Length = 687 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLNRIAAGE 9 V+NRIAAGE Sbjct: 15 VVNRIAAGE 23>NP_055590 Length = 1211 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLNRIAAG 8 +LNRIAAG Sbjct: 928 LLNRIAAG 935>NP_001007468 Length = 1242 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLNRIAAG 8 +LNRIAAG Sbjct: 959 LLNRIAAG 966>NP_001245256 Length = 1148 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLNRIAAG 8 +LNRIAAG Sbjct: 865 LLNRIAAG 872>NP_001245255 Length = 1160 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLNRIAAG 8 +LNRIAAG Sbjct: 877 LLNRIAAG 884>NP_001245254 Length = 1187 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLNRIAAG 8 +LNRIAAG Sbjct: 904 LLNRIAAG 911>XP_006724453 Length = 1160 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLNRIAAG 8 +LNRIAAG Sbjct: 877 LLNRIAAG 884>XP_005261930 Length = 1189 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLNRIAAG 8 +LNRIAAG Sbjct: 877 LLNRIAAG 884>XP_006724452 Length = 1189 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLNRIAAG 8 +LNRIAAG Sbjct: 877 LLNRIAAG 884>XP_005261929 Length = 1240 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLNRIAAG 8 +LNRIAAG Sbjct: 928 LLNRIAAG 935>XP_005261928 Length = 1247 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLNRIAAG 8 +LNRIAAG Sbjct: 935 LLNRIAAG 942>XP_005261927 Length = 1247 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLNRIAAG 8 +LNRIAAG Sbjct: 935 LLNRIAAG 942>XP_006724451 Length = 1271 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLNRIAAG 8 +LNRIAAG Sbjct: 959 LLNRIAAG 966>XP_005261926 Length = 1271 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLNRIAAG 8 +LNRIAAG Sbjct: 959 LLNRIAAG 966>XP_005261925 Length = 1271 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLNRIAAG 8 +LNRIAAG Sbjct: 959 LLNRIAAG 966>NP_612395 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLNRIAAG 8 VLN +AAG Sbjct: 70 VLNAVAAG 77>NP_001122403 Length = 389 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLNRIAAG 8 VLN +AAG Sbjct: 70 VLNAVAAG 77>NP_001258927 Length = 113 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLNRIAAGE 9 +LN+I +GE Sbjct: 69 ILNKIESGE 77>NP_004569 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLNRIAAGE 9 +LN+I +GE Sbjct: 174 ILNKIESGE 182>NP_005460 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LNRIAAGE 9 LNRIAA E Sbjct: 175 LNRIAAQE 182>XP_006724816 Length = 1105 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LNRIAAGE 9 LNR AGE Sbjct: 6 LNRFCAGE 13>XP_006724815 Length = 1105 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LNRIAAGE 9 LNR AGE Sbjct: 6 LNRFCAGE 13>XP_006724814 Length = 1116 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LNRIAAGE 9 LNR AGE Sbjct: 6 LNRFCAGE 13>XP_005262462 Length = 1129 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LNRIAAGE 9 LNR AGE Sbjct: 6 LNRFCAGE 13>XP_005260297 Length = 254 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LNRIAAGE 9 LNRIAA E Sbjct: 175 LNRIAAQE 182>XP_005260296 Length = 266 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LNRIAAGE 9 LNRIAA E Sbjct: 122 LNRIAAQE 129>XP_005263407 Length = 244 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLNRIAAG 8 VLN +AAG Sbjct: 70 VLNAVAAG 77>XP_005263406 Length = 249 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLNRIAAG 8 VLN +AAG Sbjct: 70 VLNAVAAG 77>XP_006714477 Length = 364 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLNRIAAG 8 VLN +AAG Sbjct: 70 VLNAVAAG 77>XP_006714476 Length = 412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLNRIAAG 8 VLN +AAG Sbjct: 70 VLNAVAAG 77>NP_057238 Length = 213 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLNRIAAGE 9 +LN+I +GE Sbjct: 169 ILNKIDSGE 177>NP_004167 Length = 1147 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LNRIAAG 8 +NR+AAG Sbjct: 305 INRLAAG 311>NP_001005291 Length = 1177 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LNRIAAG 8 +NR+AAG Sbjct: 335 INRLAAG 341>NP_079215 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLNRIAAG 8 VLNR A+G Sbjct: 434 VLNRYASG 441>NP_003103 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLNRIAAG 8 V+N +AAG Sbjct: 270 VINNVAAG 277>NP_071402 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LNRIAAGE 9 LNR+ GE Sbjct: 47 LNRVVGGE 54>NP_003642 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NRIAAGE 9 NRI AGE Sbjct: 257 NRIQAGE 263>XP_006721633 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LNRIAAG 8 +NR+AAG Sbjct: 281 INRLAAG 287>XP_005256829 Length = 1145 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LNRIAAG 8 +NR+AAG Sbjct: 303 INRLAAG 309>XP_006721337 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLNRIAAG 8 VLNR A+G Sbjct: 308 VLNRYASG 315>XP_006721336 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLNRIAAG 8 VLNR A+G Sbjct: 308 VLNRYASG 315>XP_005256210 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLNRIAAG 8 VLNR A+G Sbjct: 433 VLNRYASG 440>XP_005255530 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LNRIAAGE 9 LNR+ GE Sbjct: 47 LNRVVGGE 54>XP_005249886 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLNRIAAG 8 V+N +AAG Sbjct: 270 VINNVAAG 277>XP_005249885 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLNRIAAG 8 V+N +AAG Sbjct: 253 VINNVAAG 260>NP_001184008 Length = 401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RIAAGE 9 RIAAGE Sbjct: 233 RIAAGE 238>NP_001541 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RIAAGE 9 RIAAGE Sbjct: 283 RIAAGE 288>NP_001007246 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RIAAGE 9 RIAAGE Sbjct: 283 RIAAGE 288>NP_001184009 Length = 401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RIAAGE 9 RIAAGE Sbjct: 233 RIAAGE 238>NP_059523 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LNRIAAGE 9 L RIAAG+ Sbjct: 129 LTRIAAGK 136>NP_003209 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LNRIAAGE 9 L RIAAG+ Sbjct: 129 LTRIAAGK 136>NP_064551 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RIAAGE 9 RIAAGE Sbjct: 361 RIAAGE 366>NP_036379 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LNRIAAG 8 LNR AAG Sbjct: 247 LNRTAAG 253>NP_001182531 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LNRIAAG 8 LNR AAG Sbjct: 180 LNRTAAG 186>NP_036380 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LNRIAAG 8 LNR AAG Sbjct: 298 LNRTAAG 304>NP_006755 Length = 506 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RIAAGE 9 RIAAGE Sbjct: 341 RIAAGE 346>NP_115606 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNRIAAGE 9 L R+AAG+ Sbjct: 460 LERVAAGQ 467>XP_006726481 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NRIAAG 8 NR+AAG Sbjct: 25 NRVAAG 30>XP_006719700 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNRIAAGE 9 L R+AAG+ Sbjct: 460 LERVAAGQ 467>XP_005269242 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNRIAAGE 9 L R+AAG+ Sbjct: 460 LERVAAGQ 467>XP_006719699 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNRIAAGE 9 L R+AAG+ Sbjct: 373 LERVAAGQ 380>XP_005269241 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNRIAAGE 9 L R+AAG+ Sbjct: 460 LERVAAGQ 467>XP_005251349 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LNRIAAGE 9 L RIAAG+ Sbjct: 129 LTRIAAGK 136>XP_005251348 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LNRIAAGE 9 L RIAAG+ Sbjct: 129 LTRIAAGK 136>XP_006714573 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NRIAAG 8 NR+AAG Sbjct: 25 NRVAAG 30>XP_006713765 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RIAAGE 9 RIAAGE Sbjct: 252 RIAAGE 257Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.136 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 369,780 Number of extensions: 457 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |