Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 20 299 NP_000242 20 299 XP_005264389 20 299 NP_001268421 17 4312 NP_000170 17 4312 NP_001268422 17 4312 NP_001268423 17 4312 NP_694995 17 4312 NP_001186224 17 4312 XP_006723191 17 4312 XP_005264328 17 4312 NP_001137540 16 5631 NP_003870 16 7355 NP_001189445 16 7355 NP_001120655 16 7355 NP_001017975 16 7355 NP_001120656 16 7355 NP_001269287 16 7355 NP_078894 16 7355 NP_001269072 16 7355 NP_001269073 16 7355 NP_055973 16 7355 NP_001243805 16 7355 NP_694856 16 7355 NP_001243806 16 7355 XP_005271729 16 7355 XP_005271727 16 7355 XP_005271728 16 7355 XP_006718967 16 7355 XP_005271726 16 7355 XP_006716810 16 7355 XP_005251476 16 7355 XP_005251475 16 7355 XP_005251473 16 7355 XP_005251474 16 7355 XP_005251472 16 7355 XP_005251471 16 7355 XP_005251470 16 7355 XP_006716809 16 7355 XP_006716808 16 7355 XP_006716807 16 7355 XP_006716806 16 7355 XP_005251468 16 7355 XP_005251467 16 7355 XP_005246995 16 7355 XP_005246994 16 7355 XP_005246992 16 7355 XP_005246993 16 7355 XP_006710458 16 7355 NP_000076 15 9605 NP_036307 15 9605 NP_208385 15 9605 NP_005609 15 9605 NP_005863 15 9605 XP_005252908 15 9605 XP_005245790 15 9605 NP_444277 15 9605 NP_689850 15 9605>NP_001245210 Length = 868 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLMAQIGC 8 VLMAQIGC Sbjct: 620 VLMAQIGC 627>NP_000242 Length = 934 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLMAQIGC 8 VLMAQIGC Sbjct: 686 VLMAQIGC 693>XP_005264389 Length = 921 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLMAQIGC 8 VLMAQIGC Sbjct: 686 VLMAQIGC 693>NP_001268421 Length = 1230 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMAQIGC 8 +MAQ+GC Sbjct: 1022 VMAQMGC 1028>NP_000170 Length = 1360 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMAQIGC 8 +MAQ+GC Sbjct: 1152 VMAQMGC 1158>NP_001268422 Length = 1058 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMAQIGC 8 +MAQ+GC Sbjct: 850 VMAQMGC 856>NP_001268423 Length = 1058 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMAQIGC 8 +MAQ+GC Sbjct: 850 VMAQMGC 856>NP_694995 Length = 627 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LMAQIGC 8 LMA +GC Sbjct: 49 LMASVGC 55>NP_001186224 Length = 640 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LMAQIGC 8 LMA +GC Sbjct: 62 LMASVGC 68>XP_006723191 Length = 618 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LMAQIGC 8 LMA +GC Sbjct: 40 LMASVGC 46>XP_005264328 Length = 1261 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMAQIGC 8 +MAQ+GC Sbjct: 1053 VMAQMGC 1059>NP_001137540 Length = 448 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LMAQIGC 8 LMA +GC Sbjct: 62 LMASLGC 68>NP_003870 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLMAQIG 7 VLMA+IG Sbjct: 95 VLMAEIG 101>NP_001189445 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLMAQIG 7 VLMA+IG Sbjct: 95 VLMAEIG 101>NP_001120655 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLMAQIG 7 VLMA+IG Sbjct: 95 VLMAEIG 101>NP_001017975 Length = 1435 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VLMAQIGC 8 ++ AQ+GC Sbjct: 862 LIQAQLGC 869>NP_001120656 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLMAQIG 7 VLMA+IG Sbjct: 95 VLMAEIG 101>NP_001269287 Length = 975 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LMAQIGC 8 ++AQ+GC Sbjct: 638 VLAQLGC 644>NP_078894 Length = 975 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LMAQIGC 8 ++AQ+GC Sbjct: 638 VLAQLGC 644>NP_001269072 Length = 975 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LMAQIGC 8 ++AQ+GC Sbjct: 638 VLAQLGC 644>NP_001269073 Length = 975 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LMAQIGC 8 ++AQ+GC Sbjct: 638 VLAQLGC 644>NP_055973 Length = 1352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1285 LLLAQPGCN 1293>NP_001243805 Length = 1352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1285 LLLAQPGCN 1293>NP_694856 Length = 1194 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1127 LLLAQPGCN 1135>NP_001243806 Length = 1352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1285 LLLAQPGCN 1293>XP_005271729 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LMAQIGC 8 ++AQ+GC Sbjct: 460 VLAQLGC 466>XP_005271727 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LMAQIGC 8 ++AQ+GC Sbjct: 460 VLAQLGC 466>XP_005271728 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LMAQIGC 8 ++AQ+GC Sbjct: 460 VLAQLGC 466>XP_006718967 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LMAQIGC 8 ++AQ+GC Sbjct: 638 VLAQLGC 644>XP_005271726 Length = 975 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LMAQIGC 8 ++AQ+GC Sbjct: 638 VLAQLGC 644>XP_006716810 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1127 LLLAQPGCN 1135>XP_005251476 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1127 LLLAQPGCN 1135>XP_005251475 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1127 LLLAQPGCN 1135>XP_005251473 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1127 LLLAQPGCN 1135>XP_005251474 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1127 LLLAQPGCN 1135>XP_005251472 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1127 LLLAQPGCN 1135>XP_005251471 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1127 LLLAQPGCN 1135>XP_005251470 Length = 1284 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1205 LLLAQPGCN 1213>XP_006716809 Length = 1334 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1267 LLLAQPGCN 1275>XP_006716808 Length = 1346 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1267 LLLAQPGCN 1275>XP_006716807 Length = 1352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1285 LLLAQPGCN 1293>XP_006716806 Length = 1364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1285 LLLAQPGCN 1293>XP_005251468 Length = 1364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1285 LLLAQPGCN 1293>XP_005251467 Length = 1364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMAQIGCS 9 +L+AQ GC+ Sbjct: 1285 LLLAQPGCN 1293>XP_005246995 Length = 250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLMAQIG 7 VLMA+IG Sbjct: 95 VLMAEIG 101>XP_005246994 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLMAQIG 7 VLMA+IG Sbjct: 95 VLMAEIG 101>XP_005246992 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLMAQIG 7 VLMA+IG Sbjct: 95 VLMAEIG 101>XP_005246993 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLMAQIG 7 VLMA+IG Sbjct: 95 VLMAEIG 101>XP_006710458 Length = 846 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VLMAQIGC 8 ++ AQ+GC Sbjct: 273 LIQAQLGC 280>NP_000076 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLMAQIGCS 9 VLMA + C+ Sbjct: 58 VLMALVSCA 66>NP_036307 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AQIGC 8 AQIGC Sbjct: 132 AQIGC 136>NP_208385 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AQIGC 8 AQIGC Sbjct: 132 AQIGC 136>NP_005609 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLMAQIGCS 9 VLM +GC+ Sbjct: 555 VLMLLLGCA 563>NP_005863 Length = 225 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMAQIGCS 9 LM+Q GC+ Sbjct: 126 LMSQHGCN 133>XP_005252908 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AQIGC 8 AQIGC Sbjct: 127 AQIGC 131>XP_005245790 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLMAQIGCS 9 VLMA + C+ Sbjct: 58 VLMALVSCA 66>NP_444277 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LMAQIG 7 LMAQIG Sbjct: 153 LMAQIG 158>NP_689850 Length = 244 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LMAQIGC 8 LMA +GC Sbjct: 21 LMALLGC 27Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.137 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 360,815 Number of extensions: 265 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |