Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004382 18 1482 NP_001191387 16 5631 NP_683760 16 5631 NP_061117 16 5631 NP_001020368 16 5631 XP_005266503 16 5631 XP_005266502 16 5631 NP_003991 16 5631 NP_001020370 16 5631 NP_001001665 16 7355 NP_037440 16 7355 XP_005247460 16 7355 XP_005247459 16 7355 XP_006712546 16 7355 NP_000008 15 9605 NP_000675 15 9605 NP_733828 15 9605 NP_001138571 15 9605 NP_001265713 15 9605 NP_001430 15 9605 NP_001248370 15 9605 NP_001248371 15 9605 NP_001248369 15 9605 NP_001028197 15 9605 NP_001258867 15 9605 NP_057258 15 9605 NP_057133 15 9605 NP_001273689 15 9605 NP_005818 15 9605 NP_115524 15 9605 NP_001401 15 9605 NP_061917 15 9605 NP_851782 15 9605 NP_001107592 15 9605 NP_001001671 15 9605 XP_005256986 15 9605 XP_006721695 15 9605 XP_005267778 15 9605 XP_005269237 15 9605 XP_005269236 15 9605 XP_005269235 15 9605 XP_006719693 15 9605 XP_005269233 15 9605 XP_006719000 15 9605 XP_005252094 15 9605 XP_006717200 15 9605 XP_005252092 15 9605 XP_005262782 15 9605 XP_006714141 15 9605 XP_005262780 15 9605 XP_005262779 15 9605 XP_006712663 15 9605 XP_006712662 15 9605 XP_006712661 15 9605 XP_006712660 15 9605 XP_005270679 15 9605 XP_005270678 15 9605 NP_612351 15 9605>NP_004382 Length = 501 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 VLLVIAGYL 9 +L+VIAGYL Sbjct: 11 LLVVIAGYL 19>NP_001191387 Length = 417 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLVIAGYL 9 LLV+ GYL Sbjct: 16 LLVLLGYL 23>NP_683760 Length = 417 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLVIAGYL 9 LLV+ GYL Sbjct: 16 LLVLLGYL 23>NP_061117 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLVIAGYL 9 LLV+ GYL Sbjct: 16 LLVLLGYL 23>NP_001020368 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLLVIAGYL 9 +LL I GYL Sbjct: 87 ILLSIGGYL 95>XP_005266503 Length = 328 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLVIAGYL 9 LLV+ GYL Sbjct: 16 LLVLLGYL 23>XP_005266502 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLVIAGYL 9 LLV+ GYL Sbjct: 16 LLVLLGYL 23>NP_003991 Length = 390 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLLVIAGYL 9 +LL I GYL Sbjct: 97 ILLSIGGYL 105>NP_001020370 Length = 311 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLLVIAGYL 9 +LL I GYL Sbjct: 18 ILLSIGGYL 26>NP_001001665 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LVIAGYL 9 LVI GYL Sbjct: 256 LVIGGYL 262>NP_037440 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLLVIAGYL 9 +LLV GY+ Sbjct: 225 ILLVTTGYI 233>XP_005247460 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLLVIAGYL 9 +LLV GY+ Sbjct: 225 ILLVTTGYI 233>XP_005247459 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLLVIAGYL 9 +LLV GY+ Sbjct: 225 ILLVTTGYI 233>XP_006712546 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LVIAGYL 9 LVI GYL Sbjct: 331 LVIGGYL 337>NP_000008 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LVIAGYL 9 LVIAG+L Sbjct: 400 LVIAGHL 406>NP_000675 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLLVIAG 7 VLL++AG Sbjct: 69 VLLIVAG 75>NP_733828 Length = 1322 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LLVIAGYL 9 LL++ GY+ Sbjct: 1160 LLILCGYI 1167>NP_001138571 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLLVIAGY 8 VLL ++GY Sbjct: 340 VLLFVSGY 347>NP_001265713 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLLVIAG 7 VLL++AG Sbjct: 77 VLLIVAG 83>NP_001430 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 VLL++AG L Sbjct: 28 VLLLVAGAL 36>NP_001248370 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 VLL++AG L Sbjct: 36 VLLLVAGAL 44>NP_001248371 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 VLL++AG L Sbjct: 28 VLLLVAGAL 36>NP_001248369 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 VLL++AG L Sbjct: 28 VLLLVAGAL 36>NP_001028197 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 VLL++AG L Sbjct: 28 VLLLVAGAL 36>NP_001258867 Length = 2845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VLLVIAGY 8 VLLV GY Sbjct: 525 VLLVAGGY 532>NP_057258 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVIAGY 8 LV+AGY Sbjct: 465 LVVAGY 470>NP_057133 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVIAGY 8 LV+AGY Sbjct: 76 LVVAGY 81>NP_001273689 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVIAGY 8 LV+AGY Sbjct: 387 LVVAGY 392>NP_005818 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLLVIAG 7 VLL++AG Sbjct: 181 VLLIVAG 187>NP_115524 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 +LLVI G+L Sbjct: 473 LLLVIPGHL 481>NP_001401 Length = 2778 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VLLVIAGY 8 VLLV GY Sbjct: 525 VLLVAGGY 532>NP_061917 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LLVIAGY 8 LLV AGY Sbjct: 33 LLVAAGY 39>NP_851782 Length = 1283 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LLVIAGYL 9 LL++ GY+ Sbjct: 1121 LLILCGYI 1128>NP_001107592 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LLVIAGYL 9 +LV+ GY+ Sbjct: 302 ILVVCGYI 309>NP_001001671 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLLVIAG 7 VLL++AG Sbjct: 408 VLLIVAG 414>XP_005256986 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLLVIAG 7 VLL++AG Sbjct: 77 VLLIVAG 83>XP_006721695 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLLVIAG 7 VLL++AG Sbjct: 215 VLLIVAG 221>XP_005267778 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVIAGY 8 LV+AGY Sbjct: 76 LVVAGY 81>XP_005269237 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 +LLVI G+L Sbjct: 473 LLLVIPGHL 481>XP_005269236 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 +LLVI G+L Sbjct: 473 LLLVIPGHL 481>XP_005269235 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 +LLVI G+L Sbjct: 473 LLLVIPGHL 481>XP_006719693 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 +LLVI G+L Sbjct: 473 LLLVIPGHL 481>XP_005269233 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 +LLVI G+L Sbjct: 473 LLLVIPGHL 481>XP_006719000 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 +LLV+ G+L Sbjct: 17 LLLVVLGFL 25>XP_005252094 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVIAGY 8 LV+AGY Sbjct: 387 LVVAGY 392>XP_006717200 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVIAGY 8 LV+AGY Sbjct: 387 LVVAGY 392>XP_005252092 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVIAGY 8 LV+AGY Sbjct: 465 LVVAGY 470>XP_005262782 Length = 1216 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LLVIAGYL 9 LL++ GY+ Sbjct: 1054 LLILCGYI 1061>XP_006714141 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LLVIAGYL 9 LL++ GY+ Sbjct: 1097 LLILCGYI 1104>XP_005262780 Length = 1307 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LLVIAGYL 9 LL++ GY+ Sbjct: 1145 LLILCGYI 1152>XP_005262779 Length = 1314 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LLVIAGYL 9 LL++ GY+ Sbjct: 1152 LLILCGYI 1159>XP_006712663 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LLVIAGY 8 LLV AGY Sbjct: 89 LLVAAGY 95>XP_006712662 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LLVIAGY 8 LLV AGY Sbjct: 89 LLVAAGY 95>XP_006712661 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LLVIAGY 8 LLV AGY Sbjct: 89 LLVAAGY 95>XP_006712660 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LLVIAGY 8 LLV AGY Sbjct: 89 LLVAAGY 95>XP_005270679 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 VLL++AG L Sbjct: 28 VLLLVAGAL 36>XP_005270678 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 VLL++AG L Sbjct: 28 VLLLVAGAL 36>NP_612351 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLVIAGYL 9 +LLV+ G+L Sbjct: 17 LLLVVLGFL 25Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.164 0.446 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 402,572 Number of extensions: 508 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |