Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 18 1482 NP_653080 18 1482 XP_005267292 18 1482 XP_005267291 18 1482 XP_005267290 18 1482 NP_001135444 17 3301 NP_004288 17 3301 NP_002058 17 3301 NP_002063 17 3301 NP_653297 17 4312 XP_006711224 17 4312 XP_006711223 17 4312 XP_006711222 17 4312 XP_006711221 17 4312 XP_006711220 17 4312 NP_004583 16 5631 NP_001248340 16 5631 NP_065075 16 5631 XP_006719621 16 5631 XP_005246749 16 5631 XP_005246746 16 5631 NP_001120729 16 5631 NP_055873 16 7355 NP_036363 16 7355 NP_001007258 16 7355 NP_056950 16 7355 XP_006719854 16 7355 XP_006719853 16 7355 XP_005246055 16 7355 XP_006710943 16 7355 XP_006710942 16 7355 XP_006710941 16 7355 XP_005246054 16 7355 XP_005246053 16 7355 XP_006710940 16 7355 XP_005246052 16 7355 XP_005246051 16 7355 XP_005246050 16 7355 XP_005246049 16 7355 NP_001274141 15 9605 NP_001123481 15 9605 NP_078838 15 9605 NP_872431 15 9605 NP_065867 15 9605 NP_001116291 15 9605 XP_006712069 15 9605 XP_006712068 15 9605 XP_005262670 15 9605 XP_005246008 15 9605 XP_005246007 15 9605>NP_005091 Length = 1782 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 V LSEYDAV Sbjct: 847 VPLSEYDAV 855>NP_653080 Length = 1684 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 V LSEYDAV Sbjct: 749 VPLSEYDAV 757>XP_005267292 Length = 1677 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 V LSEYDAV Sbjct: 742 VPLSEYDAV 750>XP_005267291 Length = 1684 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 V LSEYDAV Sbjct: 749 VPLSEYDAV 757>XP_005267290 Length = 1782 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 V LSEYDAV Sbjct: 847 VPLSEYDAV 855>NP_001135444 Length = 165 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLSEYDAV 9 LL+EYDA+ Sbjct: 111 LLAEYDAL 118>NP_004288 Length = 355 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VLLSEYDAV 9 V LSEYD V Sbjct: 226 VALSEYDQV 234>NP_002058 Length = 359 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VLLSEYDAV 9 V LSEYD V Sbjct: 230 VALSEYDQV 238>NP_002063 Length = 359 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VLLSEYDAV 9 V LSEYD V Sbjct: 230 VALSEYDQV 238>NP_653297 Length = 1012 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLLS+YD + Sbjct: 534 VLLSKYDTL 542>XP_006711224 Length = 796 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLLS+YD + Sbjct: 534 VLLSKYDTL 542>XP_006711223 Length = 913 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLLS+YD + Sbjct: 534 VLLSKYDTL 542>XP_006711222 Length = 970 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLLS+YD + Sbjct: 492 VLLSKYDTL 500>XP_006711221 Length = 976 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLLS+YD + Sbjct: 534 VLLSKYDTL 542>XP_006711220 Length = 1012 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLLS+YD + Sbjct: 534 VLLSKYDTL 542>NP_004583 Length = 951 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LSEYDA 8 LSEYDA Sbjct: 83 LSEYDA 88>NP_001248340 Length = 1003 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LSEYDA 8 LSEYDA Sbjct: 83 LSEYDA 88>NP_065075 Length = 831 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LSEYDAV 9 L EYDAV Sbjct: 489 LEEYDAV 495>XP_006719621 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LSEYDA 8 LSEYDA Sbjct: 83 LSEYDA 88>XP_005246749 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LSEYDAV 9 L EYDAV Sbjct: 39 LEEYDAV 45>XP_005246746 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LSEYDAV 9 L EYDAV Sbjct: 556 LEEYDAV 562>NP_001120729 Length = 831 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LSEYDAV 9 L EYDAV Sbjct: 489 LEEYDAV 495>NP_055873 Length = 1905 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLLSEYDA 8 + +SEYDA Sbjct: 1630 IQMSEYDA 1637>NP_036363 Length = 1718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+EY+ + Sbjct: 891 VLLNEYNGI 899>NP_001007258 Length = 1481 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+EY+ + Sbjct: 690 VLLNEYNGI 698>NP_056950 Length = 1682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+EY+ + Sbjct: 891 VLLNEYNGI 899>XP_006719854 Length = 1550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLLSEYDA 8 + +SEYDA Sbjct: 1275 IQMSEYDA 1282>XP_006719853 Length = 1809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLLSEYDA 8 + +SEYDA Sbjct: 1534 IQMSEYDA 1541>XP_005246055 Length = 1481 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+EY+ + Sbjct: 690 VLLNEYNGI 698>XP_006710943 Length = 1517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+EY+ + Sbjct: 690 VLLNEYNGI 698>XP_006710942 Length = 1517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+EY+ + Sbjct: 690 VLLNEYNGI 698>XP_006710941 Length = 1517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+EY+ + Sbjct: 690 VLLNEYNGI 698>XP_005246054 Length = 1517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+EY+ + Sbjct: 690 VLLNEYNGI 698>XP_005246053 Length = 1644 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+EY+ + Sbjct: 817 VLLNEYNGI 825>XP_006710940 Length = 1682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+EY+ + Sbjct: 891 VLLNEYNGI 899>XP_005246052 Length = 1692 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+EY+ + Sbjct: 901 VLLNEYNGI 909>XP_005246051 Length = 1717 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+EY+ + Sbjct: 890 VLLNEYNGI 898>XP_005246050 Length = 1718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+EY+ + Sbjct: 891 VLLNEYNGI 899>XP_005246049 Length = 1728 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+EY+ + Sbjct: 901 VLLNEYNGI 909>NP_001274141 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+ YD++ Sbjct: 696 VLLNVYDSI 704>NP_001123481 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLLSEYDAV 9 VLL+ YD + Sbjct: 377 VLLTHYDMI 385>NP_078838 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VLLSEYD 7 VLLS YD Sbjct: 842 VLLSAYD 848>NP_872431 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLLSEYDAV 9 VLL+ YD + Sbjct: 377 VLLTHYDMI 385>NP_065867 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+ YD++ Sbjct: 796 VLLNVYDSI 804>NP_001116291 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+ YD++ Sbjct: 796 VLLNVYDSI 804>XP_006712069 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLLSEYDAV 9 VLL+ YD + Sbjct: 377 VLLTHYDMI 385>XP_006712068 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLLSEYDAV 9 VLL+ YD + Sbjct: 377 VLLTHYDMI 385>XP_005262670 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLLSEYDAV 9 VLL+ YD + Sbjct: 377 VLLTHYDMI 385>XP_005246008 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+ YD++ Sbjct: 796 VLLNVYDSI 804>XP_005246007 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLLSEYDAV 9 VLL+ YD++ Sbjct: 796 VLLNVYDSI 804Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.136 0.341 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 453,452 Number of extensions: 560 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |