Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 17 2528 NP_671714 17 2528 XP_006715890 17 2528 XP_005250160 17 2528 XP_005250159 17 2528 NP_116271 17 3301 NP_006793 17 3301 XP_005274106 17 3301 XP_005274105 17 3301 XP_005270447 17 3301 NP_056969 17 3301 NP_899236 16 5631 NP_056363 16 5631 NP_001138241 16 5631 NP_001138242 16 5631 NP_055994 16 5631 NP_001138586 16 5631 NP_001271266 16 5631 XP_006715232 16 5631 XP_005249382 16 5631 XP_005249381 16 5631 XP_005249380 16 5631 XP_005249379 16 5631 XP_005249377 16 5631 XP_005249376 16 5631 XP_005249375 16 5631 XP_005249374 16 5631 XP_005249373 16 5631 XP_005249372 16 5631 XP_005249371 16 5631 XP_005249370 16 5631 XP_005249369 16 5631 XP_005249368 16 5631 XP_005249367 16 5631 NP_001035362 15 9605 NP_056993 15 9605 NP_001099129 15 9605 NP_001272376 15 9605 NP_001272374 15 9605 NP_001272373 15 9605 NP_001008783 15 9605 NP_055842 15 9605 NP_001272377 15 9605 XP_006726663 15 9605 XP_006726662 15 9605 XP_006726661 15 9605 XP_006726660 15 9605 XP_006726659 15 9605 XP_006726658 15 9605 XP_006725291 15 9605 XP_006725290 15 9605 XP_006725289 15 9605 XP_006725288 15 9605 XP_006725287 15 9605 XP_006725286 15 9605 XP_005255233 15 9605 XP_006720928 15 9605 XP_005255231 15 9605 XP_005255230 15 9605 XP_006710416 15 9605 XP_006710415 15 9605 XP_005270511 15 9605>NP_005742 Length = 3907 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLLQKASER 9 VL QKASER Sbjct: 3528 VLPQKASER 3536>NP_671714 Length = 3899 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLLQKASER 9 VL QKASER Sbjct: 3520 VLPQKASER 3528>XP_006715890 Length = 3860 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLLQKASER 9 VL QKASER Sbjct: 3481 VLPQKASER 3489>XP_005250160 Length = 3939 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLLQKASER 9 VL QKASER Sbjct: 3560 VLPQKASER 3568>XP_005250159 Length = 3952 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLLQKASER 9 VL QKASER Sbjct: 3573 VLPQKASER 3581>NP_116271 Length = 399 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VLLQKASER 9 VLLQKA E+ Sbjct: 265 VLLQKAMEK 273>NP_006793 Length = 501 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQKASER 9 LQKASER Sbjct: 464 LQKASER 470>XP_005274106 Length = 1685 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLQKASER 9 LLQK SER Sbjct: 664 LLQKTSER 671>XP_005274105 Length = 1686 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLQKASER 9 LLQK SER Sbjct: 664 LLQKTSER 671>XP_005270447 Length = 448 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQKASER 9 LQKASER Sbjct: 411 LQKASER 417>NP_056969 Length = 1555 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLQKASER 9 LLQK SER Sbjct: 664 LLQKTSER 671>NP_899236 Length = 5497 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 3209 ILLQKAEE 3216>NP_056363 Length = 5171 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 2883 ILLQKAEE 2890>NP_001138241 Length = 5675 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 3387 ILLQKAEE 3394>NP_001138242 Length = 5537 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 3249 ILLQKAEE 3256>NP_055994 Length = 1297 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLQKASER 9 LL+KASE+ Sbjct: 732 LLEKASEK 739>NP_001138586 Length = 1236 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLQKASER 9 LL+KASE+ Sbjct: 671 LLEKASEK 678>NP_001271266 Length = 1197 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLQKASER 9 LL+KASE+ Sbjct: 632 LLEKASEK 639>XP_006715232 Length = 7498 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 5295 ILLQKAEE 5302>XP_005249382 Length = 5732 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 3420 ILLQKAEE 3427>XP_005249381 Length = 7281 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 4969 ILLQKAEE 4976>XP_005249380 Length = 7607 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 5295 ILLQKAEE 5302>XP_005249379 Length = 7633 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 5321 ILLQKAEE 5328>XP_005249377 Length = 7640 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 5328 ILLQKAEE 5335>XP_005249376 Length = 7647 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 5335 ILLQKAEE 5342>XP_005249375 Length = 7680 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 5368 ILLQKAEE 5375>XP_005249374 Length = 7709 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 5506 ILLQKAEE 5513>XP_005249373 Length = 7723 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 5411 ILLQKAEE 5418>XP_005249372 Length = 7785 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 5473 ILLQKAEE 5480>XP_005249371 Length = 7788 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 5506 ILLQKAEE 5513>XP_005249370 Length = 7794 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 5506 ILLQKAEE 5513>XP_005249369 Length = 7797 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 5485 ILLQKAEE 5492>XP_005249368 Length = 7812 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 5506 ILLQKAEE 5513>XP_005249367 Length = 7818 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 +LLQKA E Sbjct: 5506 ILLQKAEE 5513>NP_001035362 Length = 1762 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLLQKAS 7 VL+QKAS Sbjct: 1477 VLMQKAS 1483>NP_056993 Length = 2371 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 VLLQ ASE Sbjct: 1528 VLLQLASE 1535>NP_001099129 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QKASER 9 QKASER Sbjct: 510 QKASER 515>NP_001272376 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 607 VELQKASE 614>NP_001272374 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 594 VELQKASE 601>NP_001272373 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 595 VELQKASE 602>NP_001008783 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLLQKAS 7 VL+QKAS Sbjct: 173 VLIQKAS 179>NP_055842 Length = 788 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 622 VELQKASE 629>NP_001272377 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 531 VELQKASE 538>XP_006726663 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 595 VELQKASE 602>XP_006726662 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 607 VELQKASE 614>XP_006726661 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 613 VELQKASE 620>XP_006726660 Length = 788 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 622 VELQKASE 629>XP_006726659 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 631 VELQKASE 638>XP_006726658 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 640 VELQKASE 647>XP_006725291 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 595 VELQKASE 602>XP_006725290 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 607 VELQKASE 614>XP_006725289 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 613 VELQKASE 620>XP_006725288 Length = 788 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 622 VELQKASE 629>XP_006725287 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 631 VELQKASE 638>XP_006725286 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 640 VELQKASE 647>XP_005255233 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 607 VELQKASE 614>XP_006720928 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 613 VELQKASE 620>XP_005255231 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 631 VELQKASE 638>XP_005255230 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLLQKASE 8 V LQKASE Sbjct: 640 VELQKASE 647>XP_006710416 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QKASER 9 QKASER Sbjct: 190 QKASER 195>XP_006710415 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QKASER 9 QKASER Sbjct: 190 QKASER 195>XP_005270511 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QKASER 9 QKASER Sbjct: 190 QKASER 195Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.124 0.280 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 341,129 Number of extensions: 474 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |