Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 18 1135 NP_005913 18 1135 XP_005267046 18 1135 XP_005267045 18 1135 NP_001138384 16 5631 NP_001129503 16 5631 NP_006386 16 5631 NP_066000 16 5631 NP_001004751 16 5631 NP_001017924 16 5631 NP_001271152 16 5631 XP_006713781 16 5631 XP_006712999 16 5631 XP_005264860 16 5631 XP_006712998 16 5631 XP_006712997 16 5631 XP_006712996 16 5631 XP_006712995 16 5631 XP_006712994 16 5631 NP_001004752 16 5631 NP_001008539 16 7355 NP_001158243 16 7355 NP_003037 16 7355 NP_001275677 16 7355 NP_878907 16 7355 NP_001277026 16 7355 NP_001139808 16 7355 XP_005273981 16 7355 XP_005273669 16 7355 XP_005273668 16 7355 XP_005273667 16 7355 XP_006716452 16 7355 XP_005273666 16 7355 NP_079203 15 9605 XP_006722159 15 9605 XP_006713491 15 9605>NP_006715 Length = 1558 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLINAYLLL 9 VLI+AYLLL Sbjct: 895 VLIDAYLLL 903>NP_005913 Length = 1608 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLINAYLLL 9 VLI+AYLLL Sbjct: 895 VLIDAYLLL 903>XP_005267046 Length = 1554 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLINAYLLL 9 VLI+AYLLL Sbjct: 895 VLIDAYLLL 903>XP_005267045 Length = 1604 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLINAYLLL 9 VLI+AYLLL Sbjct: 895 VLIDAYLLL 903>NP_001138384 Length = 623 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 VL+N +LLL Sbjct: 126 VLLNKFLLL 134>NP_001129503 Length = 676 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 VL+N +LLL Sbjct: 126 VLLNKFLLL 134>NP_006386 Length = 703 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 VL+N +LLL Sbjct: 126 VLLNKFLLL 134>NP_066000 Length = 771 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 +L+N YL+L Sbjct: 640 MLVNIYLML 648>NP_001004751 Length = 324 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLINAYLLL 9 V+ N YLLL Sbjct: 287 VMANTYLLL 295>NP_001017924 Length = 550 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VLINAYLL 8 +L+N+YL+ Sbjct: 223 ILVNSYLI 230>NP_001271152 Length = 560 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VLINAYLL 8 +L+N+YL+ Sbjct: 223 ILVNSYLI 230>XP_006713781 Length = 771 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 +L+N YL+L Sbjct: 640 MLVNIYLML 648>XP_006712999 Length = 685 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 VL+N +LLL Sbjct: 126 VLLNKFLLL 134>XP_005264860 Length = 695 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 VL+N +LLL Sbjct: 126 VLLNKFLLL 134>XP_006712998 Length = 699 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 VL+N +LLL Sbjct: 126 VLLNKFLLL 134>XP_006712997 Length = 701 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 VL+N +LLL Sbjct: 126 VLLNKFLLL 134>XP_006712996 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 VL+N +LLL Sbjct: 126 VLLNKFLLL 134>XP_006712995 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 VL+N +LLL Sbjct: 126 VLLNKFLLL 134>XP_006712994 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 VL+N +LLL Sbjct: 126 VLLNKFLLL 134>NP_001004752 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLINAYLLL 9 V+ N YLLL Sbjct: 277 VMANVYLLL 285>NP_001008539 Length = 658 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 +L+N YL++ Sbjct: 569 ILVNIYLMV 577>NP_001158243 Length = 698 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 +L+N YL++ Sbjct: 609 ILVNIYLMV 617>NP_003037 Length = 697 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 +L+N YL++ Sbjct: 608 ILVNIYLMV 616>NP_001275677 Length = 604 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NAYLLL 9 NAYLLL Sbjct: 329 NAYLLL 334>NP_878907 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NAYLLL 9 NAYLLL Sbjct: 329 NAYLLL 334>NP_001277026 Length = 142 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LINAYLLL 9 L+ AYLLL Sbjct: 48 LLQAYLLL 55>NP_001139808 Length = 223 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LINAYLLL 9 L+ AYLLL Sbjct: 129 LLQAYLLL 136>XP_005273981 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NAYLLL 9 NAYLLL Sbjct: 329 NAYLLL 334>XP_005273669 Length = 658 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 +L+N YL++ Sbjct: 569 ILVNIYLMV 577>XP_005273668 Length = 658 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 +L+N YL++ Sbjct: 569 ILVNIYLMV 577>XP_005273667 Length = 658 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 +L+N YL++ Sbjct: 569 ILVNIYLMV 577>XP_006716452 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 +L+N YL++ Sbjct: 587 ILVNIYLMV 595>XP_005273666 Length = 677 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLINAYLLL 9 +L+N YL++ Sbjct: 588 ILVNIYLMV 596>NP_079203 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LINAYL 7 L+NAYL Sbjct: 742 LVNAYL 747>XP_006722159 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LINAYL 7 L+NAYL Sbjct: 739 LVNAYL 744>XP_006713491 Length = 1425 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VLINAYLL 8 +L+NAY++ Sbjct: 5 LLVNAYVM 12Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.160 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 398,548 Number of extensions: 555 Number of successful extensions: 36 Number of sequences better than 10000.0: 36 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 36 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |