Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001137469 18 1482 NP_001137468 18 1482 NP_060715 18 1482 NP_001158508 18 1935 NP_002532 18 1935 XP_005249816 18 1935 XP_005249818 18 1935 NP_001193731 17 3301 NP_004872 17 3301 NP_671713 17 3301 NP_055511 17 3301 XP_005277723 17 3301 XP_005270386 17 3301 XP_005264707 17 3301 XP_006712213 17 3301 NP_009117 17 4312 XP_005260321 17 4312 XP_005260320 17 4312 XP_006723758 17 4312 XP_006723757 17 4312 XP_006723756 17 4312 XP_006723755 17 4312 XP_006723754 17 4312 XP_006723753 17 4312 XP_005260319 17 4312 NP_036536 17 4312 NP_001167448 16 5631 NP_060110 16 5631 XP_006715203 16 5631 XP_006715202 16 5631 XP_006715201 16 5631 XP_006715200 16 5631 XP_005249275 16 5631 XP_006715199 16 5631 NP_056344 16 7355 NP_036345 16 7355 XP_006715519 16 7355 NP_001268232 15 9605 NP_006406 15 9605 NP_001034254 15 9605 NP_055919 15 9605 NP_001018098 15 9605 NP_060154 15 9605 NP_060550 15 9605 NP_065872 15 9605 NP_003881 15 9605 NP_705618 15 9605 NP_612369 15 9605 NP_004289 15 9605 NP_002034 15 9605 NP_001265241 15 9605 XP_005273907 15 9605 XP_005273906 15 9605>NP_001137469 Length = 801 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IHVRLSG 9 IHVRLSG Sbjct: 447 IHVRLSG 453>NP_001137468 Length = 953 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IHVRLSG 9 IHVRLSG Sbjct: 599 IHVRLSG 605>NP_060715 Length = 1010 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IHVRLSG 9 IHVRLSG Sbjct: 656 IHVRLSG 662>NP_001158508 Length = 1019 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IHVRLSG 9 IH+RLSG Sbjct: 665 IHIRLSG 671>NP_002532 Length = 1023 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IHVRLSG 9 IH+RLSG Sbjct: 669 IHIRLSG 675>XP_005249816 Length = 1038 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IHVRLSG 9 IH+RLSG Sbjct: 684 IHIRLSG 690>XP_005249818 Length = 1034 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IHVRLSG 9 IH+RLSG Sbjct: 680 IHIRLSG 686>NP_001193731 Length = 248 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VLIHVRLSG 9 VLIH LSG Sbjct: 144 VLIHAGLSG 152>NP_004872 Length = 332 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VLIHVRLSG 9 VLIH LSG Sbjct: 144 VLIHAGLSG 152>NP_671713 Length = 332 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VLIHVRLSG 9 VLIH LSG Sbjct: 144 VLIHAGLSG 152>NP_055511 Length = 458 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VLIHVRLSG 9 V IH RLSG Sbjct: 276 VKIHCRLSG 284>XP_005277723 Length = 458 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VLIHVRLSG 9 V IH RLSG Sbjct: 276 VKIHCRLSG 284>XP_005270386 Length = 482 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VLIHVRLSG 9 V IH RLSG Sbjct: 300 VKIHCRLSG 308>XP_005264707 Length = 243 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VLIHVRLSG 9 VLIH LSG Sbjct: 55 VLIHAGLSG 63>XP_006712213 Length = 248 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VLIHVRLSG 9 VLIH LSG Sbjct: 144 VLIHAGLSG 152>NP_009117 Length = 2442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 HVRLSG 9 HVRLSG Sbjct: 209 HVRLSG 214>XP_005260321 Length = 2365 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 HVRLSG 9 HVRLSG Sbjct: 209 HVRLSG 214>XP_005260320 Length = 2370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 HVRLSG 9 HVRLSG Sbjct: 209 HVRLSG 214>XP_006723758 Length = 2386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 HVRLSG 9 HVRLSG Sbjct: 209 HVRLSG 214>XP_006723757 Length = 2404 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 HVRLSG 9 HVRLSG Sbjct: 209 HVRLSG 214>XP_006723756 Length = 2442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 HVRLSG 9 HVRLSG Sbjct: 209 HVRLSG 214>XP_006723755 Length = 2442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 HVRLSG 9 HVRLSG Sbjct: 209 HVRLSG 214>XP_006723754 Length = 2442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 HVRLSG 9 HVRLSG Sbjct: 209 HVRLSG 214>XP_006723753 Length = 2442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 HVRLSG 9 HVRLSG Sbjct: 209 HVRLSG 214>XP_005260319 Length = 2442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 HVRLSG 9 HVRLSG Sbjct: 209 HVRLSG 214>NP_036536 Length = 131 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 LIH+ LSG Sbjct: 90 LIHLNLSG 97>NP_001167448 Length = 1365 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 426 LMHINLSG 433Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 339 LVHLDLSG 346>NP_060110 Length = 1371 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 426 LMHINLSG 433Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 339 LVHLDLSG 346>XP_006715203 Length = 949 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 426 LMHINLSG 433Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 339 LVHLDLSG 346>XP_006715202 Length = 966 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 426 LMHINLSG 433Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 339 LVHLDLSG 346>XP_006715201 Length = 1375 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 426 LMHINLSG 433Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 339 LVHLDLSG 346>XP_006715200 Length = 1419 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 426 LMHINLSG 433Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 339 LVHLDLSG 346>XP_005249275 Length = 1421 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 426 LMHINLSG 433Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 339 LVHLDLSG 346>XP_006715199 Length = 1425 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 426 LMHINLSG 433Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 339 LVHLDLSG 346>NP_056344 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLIHVRLSG 9 VL+H L+G Sbjct: 386 VLLHAHLAG 394>NP_036345 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLIHVRLSG 9 V++HV L+G Sbjct: 251 VVLHVALTG 259>XP_006715519 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLIHVRLSG 9 VL+H L+G Sbjct: 376 VLLHAHLAG 384>NP_001268232 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIHVRLSG 9 V+ H RLSG Sbjct: 324 VIDHQRLSG 332>NP_006406 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIHVRLSG 9 V+ H RLSG Sbjct: 324 VIDHQRLSG 332>NP_001034254 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLIHVRLSG 9 +L+H+ LSG Sbjct: 152 LLLHLLLSG 160>NP_055919 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 HVRLSG 9 HVRL+G Sbjct: 487 HVRLTG 492>NP_001018098 Length = 3628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LIHVRLS 8 L+HVR+S Sbjct: 812 LMHVRIS 818>NP_060154 Length = 3710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LIHVRLS 8 L+HVR+S Sbjct: 769 LMHVRIS 775>NP_060550 Length = 3585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LIHVRLS 8 L+HVR+S Sbjct: 769 LMHVRIS 775>NP_065872 Length = 3753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LIHVRLS 8 L+HVR+S Sbjct: 812 LMHVRIS 818>NP_003881 Length = 5405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LIHVRLSG 9 L+H LSG Sbjct: 2167 LLHAHLSG 2174Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LIHVRLSG 9 L+H LSG Sbjct: 3368 LLHAHLSG 3375Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LIHVRLSG 9 L+H LSG Sbjct: 4569 LLHAHLSG 4576>NP_705618 Length = 1391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LIHVRL 7 L+HVRL Sbjct: 387 LVHVRL 392>NP_612369 Length = 1372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIHVRLSG 9 L+H+ LSG Sbjct: 366 LVHLDLSG 373>NP_004289 Length = 1332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LIHVRL 7 L+HVRL Sbjct: 328 LVHVRL 333>NP_002034 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLIHVRLSG 9 +++H+ LSG Sbjct: 407 IVVHLGLSG 415>NP_001265241 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LIHVRL 7 L+HVRL Sbjct: 387 LVHVRL 392>XP_005273907 Length = 1930 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 HVRLSG 9 HVRL+G Sbjct: 487 HVRLTG 492>XP_005273906 Length = 1932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 HVRLSG 9 HVRL+G Sbjct: 487 HVRLTG 492Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.153 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 520,911 Number of extensions: 859 Number of successful extensions: 63 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |