Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 19 869 NP_004561 19 869 NP_001275703 19 869 XP_005253450 19 869 XP_006719151 19 869 NP_115495 18 1135 NP_061956 18 1935 XP_005271003 18 1935 XP_005271002 18 1935 NP_002464 17 4312 NP_694558 17 4312 NP_001274270 17 4312 NP_001078880 17 4312 NP_001274269 17 4312 NP_001139281 17 4312 NP_001070654 17 4312 NP_079005 17 4312 NP_001274324 17 4312 XP_006723449 17 4312 XP_005248298 17 4312 XP_006712547 17 4312 NP_892006 16 5631 NP_149062 16 5631 NP_667345 16 5631 NP_001157871 16 5631 NP_002495 16 5631 NP_667344 16 5631 NP_444251 16 5631 NP_001183980 16 5631 XP_006716839 16 5631 XP_005251532 16 5631 XP_005251531 16 5631 XP_005251530 16 5631 XP_006715488 16 5631 XP_006715487 16 5631 XP_006715486 16 5631 XP_006715485 16 5631 XP_006715484 16 5631 XP_006715483 16 5631 XP_006715482 16 5631 XP_006715481 16 5631 XP_006715480 16 5631 XP_006715479 16 5631 XP_006715478 16 5631 XP_006715477 16 5631 XP_006715476 16 5631 XP_006715475 16 5631 XP_006715474 16 5631 XP_006715473 16 5631 XP_006715472 16 5631 XP_006715471 16 5631 XP_006715470 16 5631 NP_060899 16 7355 XP_006725524 16 7355 XP_006725523 16 7355 XP_005276828 16 7355 XP_006726279 16 7355 XP_006714722 16 7355 XP_006714721 16 7355 NP_001265536 15 9605 NP_001265537 15 9605 NP_001265535 15 9605 NP_056100 15 9605 NP_443066 15 9605 NP_001186 15 9605 XP_005266731 15 9605 XP_006722494 15 9605 NP_001155177 15 9605>NP_001275701 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 LIEKVTTE Sbjct: 478 LIEKVTTE 485>NP_004561 Length = 1445 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 LIEKVTTE Sbjct: 478 LIEKVTTE 485>NP_001275703 Length = 1264 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 LIEKVTTE Sbjct: 256 LIEKVTTE 263>XP_005253450 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 LIEKVTTE Sbjct: 478 LIEKVTTE 485>XP_006719151 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 LIEKVTTE Sbjct: 478 LIEKVTTE 485>NP_115495 Length = 6306 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 LIEK+TTE Sbjct: 5670 LIEKITTE 5677>NP_061956 Length = 481 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VLIEKVTT 8 +L+EKVTT Sbjct: 213 ILVEKVTT 220>XP_005271003 Length = 340 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VLIEKVTT 8 +L+EKVTT Sbjct: 72 ILVEKVTT 79>XP_005271002 Length = 467 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VLIEKVTT 8 +L+EKVTT Sbjct: 199 ILVEKVTT 206>NP_002464 Length = 1960 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IEKVTTE 9 +EKVTTE Sbjct: 964 LEKVTTE 970>NP_694558 Length = 279 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LIEKVTTE 9 L+EKVT E Sbjct: 189 LVEKVTNE 196>NP_001274270 Length = 301 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LIEKVTTE 9 L+EKVT E Sbjct: 211 LVEKVTNE 218>NP_001078880 Length = 442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LIEKVTTE 9 L+EKVT E Sbjct: 352 LVEKVTNE 359>NP_001274269 Length = 279 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LIEKVTTE 9 L+EKVT E Sbjct: 189 LVEKVTNE 196>NP_001139281 Length = 2036 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IEKVTTE 9 +EKVTTE Sbjct: 1029 LEKVTTE 1035>NP_001070654 Length = 2003 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IEKVTTE 9 +EKVTTE Sbjct: 996 LEKVTTE 1002>NP_079005 Length = 1995 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IEKVTTE 9 +EKVTTE Sbjct: 988 LEKVTTE 994>NP_001274324 Length = 1688 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLIEKVTTE 9 +++EK TTE Sbjct: 68 IIMEKATTE 76>XP_006723449 Length = 2003 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IEKVTTE 9 +EKVTTE Sbjct: 996 LEKVTTE 1002>XP_005248298 Length = 464 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LIEKVTTE 9 L+EKVT E Sbjct: 374 LVEKVTNE 381>XP_006712547 Length = 1674 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLIEKVTTE 9 +++EK TTE Sbjct: 68 IIMEKATTE 76>NP_892006 Length = 8797 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4251 VFLEKFTTE 4259>NP_149062 Length = 8749 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4180 VFLEKFTTE 4188>NP_667345 Length = 833 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 LIE++TTE Sbjct: 347 LIEQLTTE 354>NP_001157871 Length = 793 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IEKVTTE 9 IEK+TTE Sbjct: 512 IEKLTTE 518>NP_002495 Length = 1120 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 LIE++TTE Sbjct: 347 LIEQLTTE 354>NP_667344 Length = 1024 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 LIE++TTE Sbjct: 347 LIEQLTTE 354>NP_444251 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IEKVTTE 9 IEKVTT+ Sbjct: 116 IEKVTTD 122>NP_001183980 Length = 569 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IEKVTTE 9 IEKVTT+ Sbjct: 116 IEKVTTD 122>XP_006716839 Length = 833 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 LIE++TTE Sbjct: 347 LIEQLTTE 354>XP_005251532 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 LIE++TTE Sbjct: 347 LIEQLTTE 354>XP_005251531 Length = 1025 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 LIE++TTE Sbjct: 347 LIEQLTTE 354>XP_005251530 Length = 1121 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 LIE++TTE Sbjct: 347 LIEQLTTE 354>XP_006715488 Length = 8721 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4258 VFLEKFTTE 4266>XP_006715487 Length = 8744 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4258 VFLEKFTTE 4266>XP_006715486 Length = 8758 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4258 VFLEKFTTE 4266>XP_006715485 Length = 8793 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4205 VFLEKFTTE 4213>XP_006715484 Length = 8794 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4206 VFLEKFTTE 4214>XP_006715483 Length = 8795 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4258 VFLEKFTTE 4266>XP_006715482 Length = 8797 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4251 VFLEKFTTE 4259>XP_006715481 Length = 8799 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4211 VFLEKFTTE 4219>XP_006715480 Length = 8799 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4258 VFLEKFTTE 4266>XP_006715479 Length = 8804 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4258 VFLEKFTTE 4266>XP_006715478 Length = 8809 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4258 VFLEKFTTE 4266>XP_006715477 Length = 8822 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4234 VFLEKFTTE 4242>XP_006715476 Length = 8823 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4258 VFLEKFTTE 4266>XP_006715475 Length = 8827 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4258 VFLEKFTTE 4266>XP_006715474 Length = 8829 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4241 VFLEKFTTE 4249>XP_006715473 Length = 8832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4258 VFLEKFTTE 4266>XP_006715472 Length = 8839 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4251 VFLEKFTTE 4259>XP_006715471 Length = 8842 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4258 VFLEKFTTE 4266>XP_006715470 Length = 8846 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLIEKVTTE 9 V +EK TTE Sbjct: 4258 VFLEKFTTE 4266>NP_060899 Length = 2624 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 ++EKVTT+ Sbjct: 1700 VLEKVTTD 1707>XP_006725524 Length = 2584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 ++EKVTT+ Sbjct: 1700 VLEKVTTD 1707>XP_006725523 Length = 2623 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 ++EKVTT+ Sbjct: 1700 VLEKVTTD 1707>XP_005276828 Length = 2584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 ++EKVTT+ Sbjct: 1700 VLEKVTTD 1707>XP_006726279 Length = 2623 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 ++EKVTT+ Sbjct: 1700 VLEKVTTD 1707>XP_006714722 Length = 2584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 ++EKVTT+ Sbjct: 1700 VLEKVTTD 1707>XP_006714721 Length = 2623 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LIEKVTTE 9 ++EKVTT+ Sbjct: 1700 VLEKVTTD 1707>NP_001265536 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IEKVTTE 9 IEK++TE Sbjct: 517 IEKISTE 523>NP_001265537 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IEKVTTE 9 IEK++TE Sbjct: 489 IEKISTE 495>NP_001265535 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IEKVTTE 9 IEK++TE Sbjct: 489 IEKISTE 495>NP_056100 Length = 1490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLIEKVTTE 9 +LIEK+ T+ Sbjct: 1312 ILIEKMPTD 1320>NP_443066 Length = 1457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLIEKVTTE 9 +LIEK+ T+ Sbjct: 1279 ILIEKMPTD 1287>NP_001186 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IEKVTTE 9 IEK++TE Sbjct: 628 IEKISTE 634>XP_005266731 Length = 982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLIEKVTTE 9 +LIEK+ T+ Sbjct: 804 ILIEKMPTD 812>XP_006722494 Length = 1490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLIEKVTTE 9 +LIEK+ T+ Sbjct: 1312 ILIEKMPTD 1320>NP_001155177 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IEKVTTE 9 IEK++TE Sbjct: 503 IEKISTE 509Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.127 0.290 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 404,780 Number of extensions: 478 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |