Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1482 XP_005271621 18 1482 XP_006718907 18 1482 XP_006718906 18 1482 XP_005271619 18 1482 XP_005271618 18 1482 NP_060899 17 4312 NP_909119 17 4312 NP_057537 17 4312 XP_006725524 17 4312 XP_006725523 17 4312 XP_005276828 17 4312 XP_006726279 17 4312 XP_006714722 17 4312 XP_006714721 17 4312 XP_005265280 17 4312 XP_006713268 17 4312 NP_038477 16 7355 XP_005268661 16 7355 XP_005268660 16 7355 XP_005268659 16 7355 XP_005268657 16 7355 XP_006719270 16 7355 XP_005268656 16 7355 XP_005268654 16 7355 XP_005268653 16 7355 NP_066997 15 9605 NP_004658 15 9605 NP_872630 15 9605 NP_003334 15 9605 NP_001189418 15 9605 NP_055640 15 9605 NP_940969 15 9605 NP_061927 15 9605 XP_006720790 15 9605 XP_005268334 15 9605 XP_005268333 15 9605 XP_006720789 15 9605 XP_006717969 15 9605 XP_005269977 15 9605 XP_006717968 15 9605 XP_006717967 15 9605 XP_006717966 15 9605 XP_006717965 15 9605 XP_005265966 15 9605>NP_000042 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 VLEKIL+SL Sbjct: 607 VLEKILVSL 615>XP_005271621 Length = 2708 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 VLEKIL+SL Sbjct: 259 VLEKILVSL 267>XP_006718907 Length = 3050 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 VLEKIL+SL Sbjct: 607 VLEKILVSL 615>XP_006718906 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 VLEKIL+SL Sbjct: 607 VLEKILVSL 615>XP_005271619 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 VLEKIL+SL Sbjct: 607 VLEKILVSL 615>XP_005271618 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 VLEKIL+SL Sbjct: 607 VLEKILVSL 615>NP_060899 Length = 2624 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLEKILLS 8 VLEKIL+S Sbjct: 833 VLEKILVS 840>NP_909119 Length = 715 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 V+E++LLSL Sbjct: 345 VMEQVLLSL 353>NP_057537 Length = 722 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 V+E++LLSL Sbjct: 352 VMEQVLLSL 360>XP_006725524 Length = 2584 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLEKILLS 8 VLEKIL+S Sbjct: 833 VLEKILVS 840>XP_006725523 Length = 2623 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLEKILLS 8 VLEKIL+S Sbjct: 833 VLEKILVS 840>XP_005276828 Length = 2584 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLEKILLS 8 VLEKIL+S Sbjct: 833 VLEKILVS 840>XP_006726279 Length = 2623 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLEKILLS 8 VLEKIL+S Sbjct: 833 VLEKILVS 840>XP_006714722 Length = 2584 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLEKILLS 8 VLEKIL+S Sbjct: 833 VLEKILVS 840>XP_006714721 Length = 2623 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VLEKILLS 8 VLEKIL+S Sbjct: 833 VLEKILVS 840>XP_005265280 Length = 644 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 V+E++LLSL Sbjct: 274 VMEQVLLSL 282>XP_006713268 Length = 695 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 V+E++LLSL Sbjct: 352 VMEQVLLSL 360>NP_038477 Length = 1905 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLEKILLS 8 VLEK LLS Sbjct: 1613 VLEKALLS 1620>XP_005268661 Length = 1657 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLEKILLS 8 VLEK LLS Sbjct: 1365 VLEKALLS 1372>XP_005268660 Length = 1875 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLEKILLS 8 VLEK LLS Sbjct: 1583 VLEKALLS 1590>XP_005268659 Length = 1894 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLEKILLS 8 VLEK LLS Sbjct: 1602 VLEKALLS 1609>XP_005268657 Length = 1903 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLEKILLS 8 VLEK LLS Sbjct: 1611 VLEKALLS 1618>XP_006719270 Length = 1903 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLEKILLS 8 VLEK LLS Sbjct: 1611 VLEKALLS 1618>XP_005268656 Length = 1903 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLEKILLS 8 VLEK LLS Sbjct: 1611 VLEKALLS 1618>XP_005268654 Length = 1923 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLEKILLS 8 VLEK LLS Sbjct: 1632 VLEKALLS 1639>XP_005268653 Length = 1924 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VLEKILLS 8 VLEK LLS Sbjct: 1632 VLEKALLS 1639>NP_066997 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEKILLSL 9 LE+ILL+L Sbjct: 725 LERILLTL 732>NP_004658 Length = 4834 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEKILLSL 9 L KILLSL Sbjct: 3380 LAKILLSL 3387>NP_872630 Length = 137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEKILLSL 9 +EKILLS+ Sbjct: 88 VEKILLSV 95>NP_003334 Length = 165 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEKILLSL 9 +EKILLS+ Sbjct: 116 VEKILLSV 123>NP_001189418 Length = 95 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEKILLSL 9 +EKILLS+ Sbjct: 46 VEKILLSV 53>NP_055640 Length = 2271 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEKILLSL 9 LE+ILL+L Sbjct: 700 LERILLTL 707>NP_940969 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLEKILLS 8 +++KILLS Sbjct: 94 IIQKILLS 101>NP_061927 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 ++EKILL++ Sbjct: 752 LIEKILLNI 760>XP_006720790 Length = 4748 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEKILLSL 9 L KILLSL Sbjct: 3294 LAKILLSL 3301>XP_005268334 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEKILLSL 9 L KILLSL Sbjct: 3342 LAKILLSL 3349>XP_005268333 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEKILLSL 9 L KILLSL Sbjct: 3342 LAKILLSL 3349>XP_006720789 Length = 4829 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEKILLSL 9 L KILLSL Sbjct: 3375 LAKILLSL 3382>XP_006717969 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 ++EKILL++ Sbjct: 356 LIEKILLNI 364>XP_005269977 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 ++EKILL++ Sbjct: 472 LIEKILLNI 480>XP_006717968 Length = 952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 ++EKILL++ Sbjct: 869 LIEKILLNI 877>XP_006717967 Length = 952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 ++EKILL++ Sbjct: 869 LIEKILLNI 877>XP_006717966 Length = 952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 ++EKILL++ Sbjct: 869 LIEKILLNI 877>XP_006717965 Length = 958 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VLEKILLSL 9 ++EKILL++ Sbjct: 875 LIEKILLNI 883>XP_005265966 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLEKILLS 8 +++KILLS Sbjct: 528 IIQKILLS 535Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.151 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 435,922 Number of extensions: 571 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |