Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 17 2528 NP_001155155 17 4312 NP_733764 17 4312 NP_653273 17 4312 NP_116012 17 4312 NP_659465 16 5631 NP_001273503 16 5631 NP_001273505 16 5631 NP_065833 16 5631 XP_006715081 16 5631 XP_005248977 16 5631 XP_005248976 16 5631 XP_006710232 16 5631 NP_001076585 16 7355 NP_005032 16 7355 NP_055668 16 7355 NP_005051 16 7355 NP_001001523 16 7355 XP_006721677 16 7355 XP_006721676 16 7355 XP_005245481 16 7355 XP_006711547 16 7355 NP_001091979 16 7355 NP_079408 15 9605 NP_008835 15 9605 NP_001075109 15 9605 XP_006714089 15 9605 XP_006714088 15 9605 XP_005262715 15 9605>NP_004110 Length = 993 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLAEASACQ 9 VLAEASA Q Sbjct: 441 VLAEASASQ 449>NP_001155155 Length = 1060 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LAEASAC 8 LAEA+AC Sbjct: 747 LAEANAC 753>NP_733764 Length = 815 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LAEASAC 8 LAEA+AC Sbjct: 502 LAEANAC 508>NP_653273 Length = 1139 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LAEASAC 8 LAEA+AC Sbjct: 826 LAEANAC 832>NP_116012 Length = 240 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLAEASAC 8 V+ EASAC Sbjct: 132 VIKEASAC 139>NP_659465 Length = 367 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AEASAC 8 AEASAC Sbjct: 129 AEASAC 134>NP_001273503 Length = 340 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AEASAC 8 AEASAC Sbjct: 102 AEASAC 107>NP_001273505 Length = 330 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AEASAC 8 AEASAC Sbjct: 102 AEASAC 107>NP_065833 Length = 505 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAEASACQ 9 LAE SAC+ Sbjct: 334 LAEFSACE 341>XP_006715081 Length = 253 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AEASAC 8 AEASAC Sbjct: 15 AEASAC 20>XP_005248977 Length = 367 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AEASAC 8 AEASAC Sbjct: 129 AEASAC 134>XP_005248976 Length = 367 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AEASAC 8 AEASAC Sbjct: 129 AEASAC 134>XP_006710232 Length = 141 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLAEASAC 8 V+AE++AC Sbjct: 85 VMAESTAC 92>NP_001076585 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLAEASACQ 9 + AEA AC+ Sbjct: 272 ISAEAKACE 280>NP_005032 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLAEASACQ 9 + AEA AC+ Sbjct: 272 ISAEAKACE 280>NP_055668 Length = 1051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLAEASACQ 9 VLAE AC+ Sbjct: 651 VLAEWKACE 659>NP_005051 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAEASAC 8 L EASAC Sbjct: 166 LPEASAC 172>NP_001001523 Length = 497 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAEASAC 8 L EASAC Sbjct: 145 LPEASAC 151>XP_006721677 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLAEASACQ 9 VLAE AC+ Sbjct: 628 VLAEWKACE 636>XP_006721676 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLAEASACQ 9 VLAE AC+ Sbjct: 673 VLAEWKACE 681>XP_005245481 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAEASAC 8 L EASAC Sbjct: 160 LPEASAC 166>XP_006711547 Length = 572 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAEASAC 8 L EASAC Sbjct: 220 LPEASAC 226>NP_001091979 Length = 1006 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLAEASACQ 9 VLAE AC+ Sbjct: 606 VLAEWKACE 614>NP_079408 Length = 1342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLAEASAC 8 V+AE S+C Sbjct: 71 VIAEKSSC 78>NP_008835 Length = 4128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLAEASAC 8 +LA+ SAC Sbjct: 3774 ILAQDSAC 3781>NP_001075109 Length = 4097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLAEASAC 8 +LA+ SAC Sbjct: 3774 ILAQDSAC 3781>XP_006714089 Length = 1281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLAEASAC 8 V+AE S+C Sbjct: 71 VIAEKSSC 78>XP_006714088 Length = 1283 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLAEASAC 8 V+AE S+C Sbjct: 12 VIAEKSSC 19>XP_005262715 Length = 1320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLAEASAC 8 V+AE S+C Sbjct: 49 VIAEKSSC 56Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.114 0.311 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 400,467 Number of extensions: 323 Number of successful extensions: 29 Number of sequences better than 10000.0: 29 Number of HSP's gapped: 29 Number of HSP's successfully gapped: 29 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |