Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1935 XP_006718907 18 1935 XP_006718906 18 1935 XP_005271619 18 1935 XP_005271618 18 1935 NP_940851 17 4312 NP_110433 17 4312 NP_065681 16 5631 NP_066124 16 5631 NP_079510 16 5631 NP_005036 16 5631 NP_774959 16 5631 NP_005287 16 5631 NP_001264929 16 5631 XP_005262183 16 5631 XP_006724702 16 5631 XP_005254755 16 5631 XP_006717999 16 5631 NP_653172 16 7355 NP_001273719 16 7355 NP_056933 16 7355 NP_001192183 16 7355 NP_002529 16 7355 NP_003121 16 7355 NP_001192184 16 7355 NP_254275 16 7355 NP_001243821 16 7355 NP_001243820 16 7355 NP_944490 16 7355 XP_006726276 16 7355 XP_006716160 16 7355 XP_006714575 16 7355 XP_005262934 16 7355 NP_057245 16 7355 NP_114368 15 9605 NP_002810 15 9605 NP_114367 15 9605 NP_004930 15 9605 NP_001338 15 9605 NP_001159445 15 9605 NP_004659 15 9605 NP_036330 15 9605 NP_001271268 15 9605 NP_940682 15 9605 NP_001271267 15 9605 NP_001271269 15 9605 NP_055892 15 9605 NP_647450 15 9605 NP_003877 15 9605 NP_064578 15 9605 NP_114141 15 9605 XP_005259655 15 9605 XP_005259654 15 9605 XP_006718702 15 9605 XP_006718701 15 9605 XP_006718700 15 9605 XP_005274169 15 9605 XP_005274166 15 9605 XP_005274165 15 9605 XP_005274163 15 9605 XP_005269501 15 9605 XP_006716232 15 9605 XP_006716231 15 9605 XP_005246503 15 9605 XP_006712464 15 9605 XP_006712463 15 9605 XP_006712462 15 9605 XP_006712461 15 9605 NP_940857 15 9605>NP_000042 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKYSSNGAI 9 VK SSNGAI Sbjct: 128 VKDSSNGAI 136>XP_006718907 Length = 3050 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKYSSNGAI 9 VK SSNGAI Sbjct: 128 VKDSSNGAI 136>XP_006718906 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKYSSNGAI 9 VK SSNGAI Sbjct: 128 VKDSSNGAI 136>XP_005271619 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKYSSNGAI 9 VK SSNGAI Sbjct: 128 VKDSSNGAI 136>XP_005271618 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKYSSNGAI 9 VK SSNGAI Sbjct: 128 VKDSSNGAI 136>NP_940851 Length = 327 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YSSNGAI 9 YSSNG++ Sbjct: 193 YSSNGSV 199>NP_110433 Length = 121 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VKYSSNGA 8 VKY NGA Sbjct: 42 VKYMKNGA 49>NP_065681 Length = 1072 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKYSSNGA 8 V YSS+GA Sbjct: 685 VSYSSSGA 692>NP_066124 Length = 1114 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKYSSNGA 8 V YSS+GA Sbjct: 685 VSYSSSGA 692>NP_079510 Length = 305 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKYSSNGA 8 VKY+ NG+ Sbjct: 280 VKYNGNGS 287>NP_005036 Length = 3460 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKYSSNGAI 9 ++YS+NG I Sbjct: 1155 LQYSNNGGI 1163>NP_774959 Length = 3458 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKYSSNGAI 9 ++YS+NG I Sbjct: 1155 LQYSNNGGI 1163>NP_005287 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KYSSNGAI 9 KY+ NGA+ Sbjct: 38 KYNLNGAV 45>NP_001264929 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KYSSNGAI 9 KY+ NGA+ Sbjct: 38 KYNLNGAV 45>XP_005262183 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KYSSNGAI 9 KY+ NGA+ Sbjct: 38 KYNLNGAV 45>XP_006724702 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KYSSNGAI 9 KY+ NGA+ Sbjct: 38 KYNLNGAV 45>XP_005254755 Length = 305 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKYSSNGA 8 VKY+ NG+ Sbjct: 280 VKYNGNGS 287>XP_006717999 Length = 1207 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKYSSNGA 8 V YSS+GA Sbjct: 778 VSYSSSGA 785>NP_653172 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKYSSNGAI 9 V+Y SNG + Sbjct: 420 VEYLSNGGV 428>NP_001273719 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKYSSNGAI 9 V+Y SNG + Sbjct: 420 VEYLSNGGV 428>NP_056933 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKYSSNG 7 ++YSSNG Sbjct: 46 LQYSSNG 52>NP_001192183 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YSSNGAI 9 YSSNG + Sbjct: 325 YSSNGKV 331>NP_002529 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YSSNGAI 9 YSSNG + Sbjct: 325 YSSNGKV 331>NP_003121 Length = 198 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KYSSNGAI 9 +YS+NG I Sbjct: 147 RYSTNGKI 154>NP_001192184 Length = 271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YSSNGAI 9 YSSNG + Sbjct: 74 YSSNGKV 80>NP_254275 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKYSSNG 7 ++YSSNG Sbjct: 46 LQYSSNG 52>NP_001243821 Length = 180 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KYSSNGAI 9 +YS+NG I Sbjct: 132 RYSTNGKI 139>NP_001243820 Length = 195 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KYSSNGAI 9 +YS+NG I Sbjct: 147 RYSTNGKI 154>NP_944490 Length = 183 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KYSSNGAI 9 +YS+NG I Sbjct: 132 RYSTNGKI 139>XP_006726276 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YSSNGAI 9 YSSNG + Sbjct: 271 YSSNGKV 277>XP_006716160 Length = 113 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KYSSNGAI 9 +YS+NG I Sbjct: 62 RYSTNGKI 69>XP_006714575 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YSSNGAI 9 YSSNG + Sbjct: 271 YSSNGKV 277>XP_005262934 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKYSSNGAI 9 V+Y SNG + Sbjct: 415 VEYLSNGGV 423>NP_057245 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KYSSNG 7 +YSSNG Sbjct: 188 RYSSNG 193>NP_114368 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKYSSNGAI 9 V +SSNG + Sbjct: 472 VLFSSNGGV 480>NP_002810 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKYSSNGAI 9 V +SSNG + Sbjct: 498 VLFSSNGGV 506>NP_114367 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKYSSNGAI 9 V +SSNG + Sbjct: 491 VLFSSNGGV 499>NP_004930 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VKYSSNG 7 VK+S NG Sbjct: 203 VKFSKNG 209>NP_001338 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YSSNGAI 9 YSS GA+ Sbjct: 536 YSSQGAV 542>NP_001159445 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKYSSNG 7 +KYSS+G Sbjct: 330 LKYSSSG 336>NP_004659 Length = 1857 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VKYSSNGA 8 V+Y+S+GA Sbjct: 1008 VQYNSHGA 1015>NP_036330 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KYSSNGAI 9 +YS NG I Sbjct: 166 RYSKNGRI 173>NP_001271268 Length = 1303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YSSNGA 8 YSSNG+ Sbjct: 162 YSSNGS 167>NP_940682 Length = 1247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YSSNGA 8 YSSNG+ Sbjct: 162 YSSNGS 167>NP_001271267 Length = 1319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YSSNGA 8 YSSNG+ Sbjct: 162 YSSNGS 167>NP_001271269 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YSSNGA 8 YSSNG+ Sbjct: 162 YSSNGS 167>NP_055892 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VKYSSNG 7 V YS+NG Sbjct: 378 VSYSTNG 384>NP_647450 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KYSSNGA 8 KYS++GA Sbjct: 704 KYSNDGA 710>NP_003877 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KYSSNGA 8 KYS++GA Sbjct: 713 KYSNDGA 719>NP_064578 Length = 1322 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNGAI 9 SSNGAI Sbjct: 489 SSNGAI 494>NP_114141 Length = 5635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YSSNGAI 9 YS+NG I Sbjct: 5612 YSANGTI 5618>XP_005259655 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKYSSNGAI 9 V +SSNG + Sbjct: 474 VLFSSNGGV 482>XP_005259654 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKYSSNGAI 9 V +SSNG + Sbjct: 500 VLFSSNGGV 508>XP_006718702 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNGAI 9 SSNGAI Sbjct: 439 SSNGAI 444>XP_006718701 Length = 1309 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNGAI 9 SSNGAI Sbjct: 490 SSNGAI 495>XP_006718700 Length = 1216 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNGAI 9 SSNGAI Sbjct: 504 SSNGAI 509>XP_005274169 Length = 1272 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNGAI 9 SSNGAI Sbjct: 453 SSNGAI 458>XP_005274166 Length = 1323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNGAI 9 SSNGAI Sbjct: 504 SSNGAI 509>XP_005274165 Length = 1323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNGAI 9 SSNGAI Sbjct: 490 SSNGAI 495>XP_005274163 Length = 1337 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNGAI 9 SSNGAI Sbjct: 504 SSNGAI 509>XP_005269501 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKYSSNG 7 +KYSS+G Sbjct: 551 LKYSSSG 557>XP_006716232 Length = 2753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VKYSSNGA 8 V+Y+S+GA Sbjct: 1008 VQYNSHGA 1015Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VKYSSNGA 8 V+Y+S+GA Sbjct: 1904 VQYNSHGA 1911>XP_006716231 Length = 2753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VKYSSNGA 8 V+Y+S+GA Sbjct: 1008 VQYNSHGA 1015Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VKYSSNGA 8 V+Y+S+GA Sbjct: 1904 VQYNSHGA 1911>XP_005246503 Length = 233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KYSSNGAI 9 +YS NG I Sbjct: 166 RYSKNGRI 173>XP_006712464 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KYSSNGAI 9 +YS NG I Sbjct: 192 RYSKNGRI 199>XP_006712463 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KYSSNGAI 9 +YS NG I Sbjct: 181 RYSKNGRI 188>XP_006712462 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KYSSNGAI 9 +YS NG I Sbjct: 192 RYSKNGRI 199>XP_006712461 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KYSSNGAI 9 +YS NG I Sbjct: 192 RYSKNGRI 199>NP_940857 Length = 5147 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNGAI 9 SSNGAI Sbjct: 3353 SSNGAI 3358Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.121 0.314 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 618,295 Number of extensions: 1129 Number of successful extensions: 71 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |