Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 NP_002061 17 4312 NP_002060 17 4312 NP_001243343 17 4312 NP_001269549 17 4312 NP_001269547 17 4312 NP_001269546 17 4312 NP_001269548 17 4312 NP_620073 17 4312 NP_066268 17 4312 NP_001159897 17 4312 NP_006487 17 4312 NP_005263 16 5631 NP_653082 16 5631 NP_000163 16 5631 NP_001095856 16 5631 NP_060860 15 9605 NP_056127 15 9605 NP_002171 15 9605 XP_006724930 15 9605 XP_006724929 15 9605 XP_006724928 15 9605 XP_006724509 15 9605 XP_006724508 15 9605 XP_006724507 15 9605 XP_005274034 15 9605 XP_005274033 15 9605 XP_006714407 15 9605 XP_006714406 15 9605 XP_006714405 15 9605 XP_005263349 15 9605 XP_005263348 15 9605 XP_005263347 15 9605 XP_005263346 15 9605 XP_005263345 15 9605 XP_005263344 15 9605 XP_005263343 15 9605 XP_005263342 15 9605 XP_005263341 15 9605 XP_005263340 15 9605 XP_005263339 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKTTAVVEE 9 VKTTA VEE Sbjct: 1739 VKTTAAVEE 1747>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKTTAVVEE 9 VKTTA VEE Sbjct: 1739 VKTTAAVEE 1747>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKTTAVVEE 9 VKTTA VEE Sbjct: 1692 VKTTAAVEE 1700>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKTTAVVEE 9 VKTTA VEE Sbjct: 1771 VKTTAAVEE 1779>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKTTAVVEE 9 VKTTA VEE Sbjct: 1771 VKTTAAVEE 1779>NP_002061 Length = 355 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT +VE Sbjct: 180 VKTTGIVE 187>NP_002060 Length = 354 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT +VE Sbjct: 179 VKTTGIVE 186>NP_001243343 Length = 302 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT +VE Sbjct: 127 VKTTGIVE 134>NP_001269549 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT +VE Sbjct: 164 VKTTGIVE 171>NP_001269547 Length = 274 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT +VE Sbjct: 99 VKTTGIVE 106>NP_001269546 Length = 303 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT +VE Sbjct: 128 VKTTGIVE 135>NP_001269548 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT +VE Sbjct: 164 VKTTGIVE 171>NP_620073 Length = 354 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT +VE Sbjct: 180 VKTTGIVE 187>NP_066268 Length = 354 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT +VE Sbjct: 180 VKTTGIVE 187>NP_001159897 Length = 318 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT +VE Sbjct: 143 VKTTGIVE 150>NP_006487 Length = 354 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT +VE Sbjct: 179 VKTTGIVE 186>NP_005263 Length = 354 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT ++E Sbjct: 179 VKTTGIIE 186>NP_653082 Length = 350 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT ++E Sbjct: 175 VKTTGIIE 182>NP_000163 Length = 350 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT ++E Sbjct: 175 VKTTGIIE 182>NP_001095856 Length = 354 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKTTAVVE 8 VKTT ++E Sbjct: 179 VKTTGIIE 186>NP_060860 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VKTTAVVEE 9 V TTA+VE+ Sbjct: 124 VYTTALVED 132>NP_056127 Length = 5005 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 1614 RTTAIVE 1620>NP_002171 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KTTAVVE 8 KTT VVE Sbjct: 220 KTTTVVE 226>XP_006724930 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VKTTAVVEE 9 V TTA+VE+ Sbjct: 124 VYTTALVED 132>XP_006724929 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VKTTAVVEE 9 V TTA+VE+ Sbjct: 124 VYTTALVED 132>XP_006724928 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VKTTAVVEE 9 V TTA+VE+ Sbjct: 124 VYTTALVED 132>XP_006724509 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VKTTAVVEE 9 V TTA+VE+ Sbjct: 124 VYTTALVED 132>XP_006724508 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VKTTAVVEE 9 V TTA+VE+ Sbjct: 124 VYTTALVED 132>XP_006724507 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VKTTAVVEE 9 V TTA+VE+ Sbjct: 124 VYTTALVED 132>XP_005274034 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KTTAVVE 8 KTT VVE Sbjct: 220 KTTTVVE 226>XP_005274033 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KTTAVVE 8 KTT VVE Sbjct: 220 KTTTVVE 226>XP_006714407 Length = 5004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 1613 RTTAIVE 1619>XP_006714406 Length = 3680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 1614 RTTAIVE 1620>XP_006714405 Length = 4103 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 691 RTTAIVE 697>XP_005263349 Length = 4410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 998 RTTAIVE 1004>XP_005263348 Length = 4443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 1031 RTTAIVE 1037>XP_005263347 Length = 4640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 1614 RTTAIVE 1620>XP_005263346 Length = 4983 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 1571 RTTAIVE 1577>XP_005263345 Length = 4991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 1614 RTTAIVE 1620>XP_005263344 Length = 5005 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 1614 RTTAIVE 1620>XP_005263343 Length = 5009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 1614 RTTAIVE 1620>XP_005263342 Length = 5025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 1613 RTTAIVE 1619>XP_005263341 Length = 5026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 1614 RTTAIVE 1620>XP_005263340 Length = 5026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 1614 RTTAIVE 1620>XP_005263339 Length = 5026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KTTAVVE 8 +TTA+VE Sbjct: 1614 RTTAIVE 1620Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.296 0.111 0.247 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 325,146 Number of extensions: 382 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |