Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 21 175 NP_055459 21 175 XP_006726410 21 175 XP_006711719 21 175 XP_006711716 21 175 XP_005273038 21 175 XP_006711164 21 175 NP_056477 17 2528 XP_006712050 17 2528 XP_005264311 17 2528 XP_006712049 17 2528 NP_005520 17 3301 XP_006710661 17 3301 XP_005245920 17 3301 XP_006710660 17 3301 XP_006710659 17 3301 XP_006710658 17 3301 XP_006710657 17 3301 NP_848604 16 5631 NP_065883 16 5631 NP_079385 16 5631 NP_001157207 16 5631 XP_006725418 16 5631 XP_006725417 16 5631 XP_006725416 16 5631 XP_006725415 16 5631 XP_006725414 16 5631 XP_005257754 16 5631 XP_005257753 16 5631 XP_006722172 16 5631 XP_006722171 16 5631 XP_006722170 16 5631 XP_005257244 16 5631 XP_005245423 16 5631 XP_005245425 16 5631 NP_001157915 16 7355 NP_775267 15 9605 NP_775268 15 9605 NP_001123537 15 9605 NP_775266 15 9605 NP_004094 15 9605 NP_036581 15 9605 NP_006370 15 9605 NP_004136 15 9605 XP_006722821 15 9605 XP_006722820 15 9605 XP_005259972 15 9605 XP_006722819 15 9605 XP_006722818 15 9605 XP_005273505 15 9605 XP_005273504 15 9605 XP_005250170 15 9605>NP_001185761 Length = 2240 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VKSVRALPC 9 VKS+RALPC Sbjct: 2228 VKSLRALPC 2236>NP_055459 Length = 2346 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VKSVRALPC 9 VKS+RALPC Sbjct: 2334 VKSLRALPC 2342>XP_006726410 Length = 2087 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VKSVRALPC 9 VKS+RALPC Sbjct: 2075 VKSLRALPC 2083>XP_006711719 Length = 2302 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VKSVRALPC 9 VKS+RALPC Sbjct: 2290 VKSLRALPC 2298>XP_006711716 Length = 2411 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VKSVRALPC 9 VKS+RALPC Sbjct: 2399 VKSLRALPC 2407>XP_005273038 Length = 2509 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VKSVRALPC 9 VKS+RALPC Sbjct: 2497 VKSLRALPC 2505>XP_006711164 Length = 2087 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VKSVRALPC 9 VKS+RALPC Sbjct: 2075 VKSLRALPC 2083>NP_056477 Length = 1749 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRALPC 9 VRALPC Sbjct: 1681 VRALPC 1686>XP_006712050 Length = 1716 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRALPC 9 VRALPC Sbjct: 1648 VRALPC 1653>XP_005264311 Length = 1727 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRALPC 9 VRALPC Sbjct: 1659 VRALPC 1664>XP_006712049 Length = 1728 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRALPC 9 VRALPC Sbjct: 1660 VRALPC 1665>NP_005520 Length = 4391 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SVRALPC 9 SVR LPC Sbjct: 279 SVRPLPC 285>XP_006710661 Length = 4057 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SVRALPC 9 SVR LPC Sbjct: 296 SVRPLPC 302>XP_005245920 Length = 4392 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SVRALPC 9 SVR LPC Sbjct: 279 SVRPLPC 285>XP_006710660 Length = 4397 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SVRALPC 9 SVR LPC Sbjct: 279 SVRPLPC 285>XP_006710659 Length = 4556 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SVRALPC 9 SVR LPC Sbjct: 296 SVRPLPC 302>XP_006710658 Length = 4563 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SVRALPC 9 SVR LPC Sbjct: 279 SVRPLPC 285>XP_006710657 Length = 4579 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SVRALPC 9 SVR LPC Sbjct: 296 SVRPLPC 302>NP_848604 Length = 553 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VKSVRAL 7 VKSVRAL Sbjct: 486 VKSVRAL 492>NP_065883 Length = 1237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KSVRALPC 9 KSV+ PC Sbjct: 988 KSVKKFPC 995>NP_079385 Length = 770 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 V S+RALP Sbjct: 711 VTSIRALP 718>NP_001157207 Length = 970 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 V S+RALP Sbjct: 911 VTSIRALP 918>XP_006725418 Length = 705 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 V S+RALP Sbjct: 646 VTSIRALP 653>XP_006725417 Length = 725 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 V S+RALP Sbjct: 666 VTSIRALP 673>XP_006725416 Length = 808 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 V S+RALP Sbjct: 749 VTSIRALP 756>XP_006725415 Length = 990 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 V S+RALP Sbjct: 931 VTSIRALP 938>XP_006725414 Length = 1034 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 V S+RALP Sbjct: 975 VTSIRALP 982>XP_005257754 Length = 705 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 V S+RALP Sbjct: 646 VTSIRALP 653>XP_005257753 Length = 707 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 V S+RALP Sbjct: 648 VTSIRALP 655>XP_006722172 Length = 808 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 V S+RALP Sbjct: 749 VTSIRALP 756>XP_006722171 Length = 972 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 V S+RALP Sbjct: 913 VTSIRALP 920>XP_006722170 Length = 1016 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 V S+RALP Sbjct: 957 VTSIRALP 964>XP_005257244 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VKSVRAL 7 VKSVRAL Sbjct: 488 VKSVRAL 494>XP_005245423 Length = 1246 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KSVRALPC 9 KSV+ PC Sbjct: 997 KSVKKFPC 1004>XP_005245425 Length = 1299 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KSVRALPC 9 KSV+ PC Sbjct: 1050 KSVKKFPC 1057>NP_001157915 Length = 1873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KSVRALPC 9 KSV +PC Sbjct: 1657 KSVSVVPC 1664>NP_775267 Length = 967 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 ++S+R LP Sbjct: 305 IRSIRCLP 312>NP_775268 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 ++S+R LP Sbjct: 305 IRSIRCLP 312>NP_001123537 Length = 2022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 +KS++ LP Sbjct: 747 IKSIKGLP 754>NP_775266 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 ++S+R LP Sbjct: 305 IRSIRCLP 312>NP_004094 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 ++S+R LP Sbjct: 305 IRSIRCLP 312>NP_036581 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KSVRALPC 9 KS+ LPC Sbjct: 305 KSILFLPC 312>NP_006370 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVRALP 8 SVRALP Sbjct: 682 SVRALP 687>NP_004136 Length = 2157 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 +KS++ LP Sbjct: 747 IKSIKGLP 754>XP_006722821 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 +KS++ LP Sbjct: 747 IKSIKGLP 754>XP_006722820 Length = 2140 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 +KS++ LP Sbjct: 747 IKSIKGLP 754>XP_005259972 Length = 2141 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 +KS++ LP Sbjct: 747 IKSIKGLP 754>XP_006722819 Length = 2156 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 +KS++ LP Sbjct: 747 IKSIKGLP 754>XP_006722818 Length = 2157 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 +KS++ LP Sbjct: 747 IKSIKGLP 754>XP_005273505 Length = 997 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 ++S+R LP Sbjct: 305 IRSIRCLP 312>XP_005273504 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKSVRALP 8 ++S+R LP Sbjct: 305 IRSIRCLP 312>XP_005250170 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVRALP 8 SVRALP Sbjct: 624 SVRALP 629Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.135 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 371,785 Number of extensions: 527 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |