Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 21 229 XP_006716142 21 229 XP_005250088 21 229 XP_006716141 21 229 XP_006716140 21 229 XP_005250084 21 229 XP_005250083 21 229 XP_005250082 21 229 NP_005874 17 3301 XP_006722673 17 3301 XP_006722672 17 3301 XP_006722671 17 3301 XP_006722670 17 3301 XP_005259532 17 3301 NP_001010873 17 4312 NP_001153198 17 4312 NP_803875 17 4312 NP_055498 16 5631 NP_001136082 16 5631 NP_065939 16 5631 NP_001185901 16 5631 XP_006721669 16 5631 XP_006710855 16 5631 XP_006710854 16 5631 NP_073744 16 7355 NP_001030611 16 7355 NP_001361 16 7355 NP_443152 16 7355 XP_005252192 16 7355 XP_006712019 16 7355 XP_006711992 16 7355 NP_004499 16 7355 NP_001073896 15 9605 NP_003253 15 9605 NP_001244289 15 9605 NP_004332 15 9605 NP_981949 15 9605 NP_631895 15 9605 NP_001244290 15 9605 NP_004028 15 9605 NP_689760 15 9605 XP_006724219 15 9605 XP_006724218 15 9605 XP_006724217 15 9605 XP_006714888 15 9605 XP_006714887 15 9605 XP_006714886 15 9605 XP_005263859 15 9605 XP_005264615 15 9605 XP_006712164 15 9605 XP_005264614 15 9605 XP_005264613 15 9605 XP_005264612 15 9605 XP_006711542 15 9605 XP_006711541 15 9605 XP_005245460 15 9605 XP_005270809 15 9605 NP_689726 15 9605>NP_733751 Length = 4911 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKRFVLMPH 9 VKRFVL PH Sbjct: 4719 VKRFVLRPH 4727>XP_006716142 Length = 4927 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKRFVLMPH 9 VKRFVL PH Sbjct: 4735 VKRFVLRPH 4743>XP_005250088 Length = 4928 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKRFVLMPH 9 VKRFVL PH Sbjct: 4736 VKRFVLRPH 4744>XP_006716141 Length = 4959 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKRFVLMPH 9 VKRFVL PH Sbjct: 4767 VKRFVLRPH 4775>XP_006716140 Length = 4982 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKRFVLMPH 9 VKRFVL PH Sbjct: 4790 VKRFVLRPH 4798>XP_005250084 Length = 4982 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKRFVLMPH 9 VKRFVL PH Sbjct: 4790 VKRFVLRPH 4798>XP_005250083 Length = 4982 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKRFVLMPH 9 VKRFVL PH Sbjct: 4790 VKRFVLRPH 4798>XP_005250082 Length = 4983 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKRFVLMPH 9 VKRFVL PH Sbjct: 4791 VKRFVLRPH 4799>NP_005874 Length = 2303 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKRFVLMPH 9 VKR+ +PH Sbjct: 2096 VKRYASLPH 2104>XP_006722673 Length = 2302 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKRFVLMPH 9 VKR+ +PH Sbjct: 2095 VKRYASLPH 2103>XP_006722672 Length = 2303 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKRFVLMPH 9 VKR+ +PH Sbjct: 2096 VKRYASLPH 2104>XP_006722671 Length = 2303 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKRFVLMPH 9 VKR+ +PH Sbjct: 2096 VKRYASLPH 2104>XP_006722670 Length = 2326 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKRFVLMPH 9 VKR+ +PH Sbjct: 2119 VKRYASLPH 2127>XP_005259532 Length = 2327 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKRFVLMPH 9 VKR+ +PH Sbjct: 2120 VKRYASLPH 2128>NP_001010873 Length = 170 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FVLMPH 9 FVL+PH Sbjct: 8 FVLLPH 13>NP_001153198 Length = 170 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FVLMPH 9 FVL+PH Sbjct: 8 FVLLPH 13>NP_803875 Length = 4243 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KRFVLMPH 9 +RFVL+P+ Sbjct: 1653 RRFVLLPN 1660>NP_055498 Length = 1036 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FVLMPH 9 FVL+PH Sbjct: 353 FVLVPH 358>NP_001136082 Length = 1036 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FVLMPH 9 FVL+PH Sbjct: 353 FVLVPH 358>NP_065939 Length = 1094 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RFVLMPH 9 RFV+ PH Sbjct: 657 RFVIPPH 663>NP_001185901 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RFVLMPH 9 RFV+ PH Sbjct: 598 RFVIPPH 604>XP_006721669 Length = 1009 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FVLMPH 9 FVL+PH Sbjct: 353 FVLVPH 358>XP_006710855 Length = 821 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RFVLMPH 9 RFV+ PH Sbjct: 384 RFVIPPH 390>XP_006710854 Length = 1046 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RFVLMPH 9 RFV+ PH Sbjct: 609 RFVIPPH 615>NP_073744 Length = 746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RFVLMPH 9 RF L+PH Sbjct: 88 RFSLVPH 94>NP_001030611 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RFVLMPH 9 RF L+PH Sbjct: 75 RFSLVPH 81>NP_001361 Length = 4158 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 FVLMPH 9 FV++PH Sbjct: 1037 FVILPH 1042>NP_443152 Length = 875 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 KRFVLMPH 9 KR+ ++PH Sbjct: 557 KRYHMLPH 564>XP_005252192 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RFVLMPH 9 RF L+PH Sbjct: 77 RFSLVPH 83>XP_006712019 Length = 4158 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 FVLMPH 9 FV++PH Sbjct: 1037 FVILPH 1042>XP_006711992 Length = 875 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 KRFVLMPH 9 KR+ ++PH Sbjct: 557 KRYHMLPH 564>NP_004499 Length = 284 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKRFVLMP 8 ++ FV+MP Sbjct: 52 IRHFVMMP 59>NP_001073896 Length = 1577 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 RFVLMP 8 RF++MP Sbjct: 1244 RFIIMP 1249>NP_003253 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KRFVLMPH 9 K+F L PH Sbjct: 166 KKFKLEPH 173>NP_001244289 Length = 879 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FVLMPH 9 FVL PH Sbjct: 682 FVLRPH 687>NP_004332 Length = 2225 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RFVLMPH 9 +F+L PH Sbjct: 2164 QFILTPH 2170>NP_981949 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FVLMPH 9 FVL PH Sbjct: 563 FVLRPH 568>NP_631895 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FVLMPH 9 FVL PH Sbjct: 601 FVLRPH 606>NP_001244290 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FVLMPH 9 FVL PH Sbjct: 564 FVLRPH 569>NP_004028 Length = 879 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FVLMPH 9 FVL PH Sbjct: 682 FVLRPH 687>NP_689760 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FVLMPH 9 FVL PH Sbjct: 431 FVLAPH 436>XP_006724219 Length = 1157 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 FVLMPH 9 FV++PH Sbjct: 466 FVIVPH 471>XP_006724218 Length = 1200 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 FVLMPH 9 FV++PH Sbjct: 544 FVIVPH 549>XP_006724217 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 FVLMPH 9 FV++PH Sbjct: 544 FVIVPH 549>XP_006714888 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FVLMPH 9 FVL PH Sbjct: 362 FVLAPH 367>XP_006714887 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FVLMPH 9 FVL PH Sbjct: 424 FVLAPH 429>XP_006714886 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FVLMPH 9 FVL PH Sbjct: 424 FVLAPH 429>XP_005263859 Length = 1606 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 RFVLMP 8 RF++MP Sbjct: 1273 RFIIMP 1278>XP_005264615 Length = 2162 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RFVLMPH 9 +F+L PH Sbjct: 2101 QFILTPH 2107>XP_006712164 Length = 2179 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RFVLMPH 9 +F+L PH Sbjct: 2118 QFILTPH 2124>XP_005264614 Length = 2191 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RFVLMPH 9 +F+L PH Sbjct: 2130 QFILTPH 2136>XP_005264613 Length = 2208 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RFVLMPH 9 +F+L PH Sbjct: 2147 QFILTPH 2153>XP_005264612 Length = 2242 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RFVLMPH 9 +F+L PH Sbjct: 2181 QFILTPH 2187>XP_006711542 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FVLMPH 9 FVL PH Sbjct: 31 FVLSPH 36>XP_006711541 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FVLMPH 9 FVL PH Sbjct: 31 FVLSPH 36>XP_005245460 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FVLMPH 9 FVL PH Sbjct: 31 FVLSPH 36>XP_005270809 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FVLMPH 9 FVL PH Sbjct: 607 FVLRPH 612>NP_689726 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 FVLMPH 9 FV++PH Sbjct: 583 FVIVPH 588Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.152 0.499 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 457,147 Number of extensions: 702 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |