Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 299 XP_006716142 20 299 XP_005250088 20 299 XP_006716141 20 299 XP_005250085 20 299 XP_006716140 20 299 XP_005250084 20 299 XP_005250083 20 299 XP_005250082 20 299 NP_003473 17 3301 NP_055590 17 3301 NP_001007468 17 3301 NP_001245256 17 3301 NP_001245255 17 3301 NP_001245254 17 3301 XP_005261931 17 3301 XP_006724453 17 3301 XP_005261930 17 3301 XP_006724452 17 3301 XP_005261929 17 3301 XP_005261928 17 3301 XP_005261927 17 3301 XP_006724451 17 3301 XP_005261926 17 3301 XP_005261925 17 3301 XP_006719679 17 3301 XP_005269219 17 3301 XP_006719678 17 3301 XP_006719677 17 3301 NP_001273589 17 4312 NP_001273586 17 4312 NP_689630 17 4312 NP_061923 17 4312 XP_006716482 17 4312 XP_005251207 17 4312 XP_005263135 17 4312 XP_005263134 17 4312 XP_006714303 17 4312 XP_005263133 17 4312 XP_005263131 17 4312 XP_005263130 17 4312 NP_062541 16 7355 NP_671494 16 7355 NP_006268 16 7355 NP_055289 16 7355 NP_001009568 16 7355 XP_006725609 16 7355 XP_005254564 16 7355 NP_000194 15 9605 NP_689914 15 9605 NP_001152869 15 9605 NP_001152870 15 9605 NP_443170 15 9605 NP_001073904 15 9605 NP_000909 15 9605 XP_005272481 15 9605 XP_006713944 15 9605 XP_005244924 15 9605 XP_005244923 15 9605>NP_733751 Length = 4911 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKQIATLWR 9 VKQIA LWR Sbjct: 1675 VKQIAKLWR 1683>XP_006716142 Length = 4927 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKQIATLWR 9 VKQIA LWR Sbjct: 1692 VKQIAKLWR 1700>XP_005250088 Length = 4928 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKQIATLWR 9 VKQIA LWR Sbjct: 1692 VKQIAKLWR 1700>XP_006716141 Length = 4959 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKQIATLWR 9 VKQIA LWR Sbjct: 1692 VKQIAKLWR 1700>XP_005250085 Length = 4979 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKQIATLWR 9 VKQIA LWR Sbjct: 1692 VKQIAKLWR 1700>XP_006716140 Length = 4982 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKQIATLWR 9 VKQIA LWR Sbjct: 1692 VKQIAKLWR 1700>XP_005250084 Length = 4982 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKQIATLWR 9 VKQIA LWR Sbjct: 1692 VKQIAKLWR 1700>XP_005250083 Length = 4982 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKQIATLWR 9 VKQIA LWR Sbjct: 1691 VKQIAKLWR 1699>XP_005250082 Length = 4983 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKQIATLWR 9 VKQIA LWR Sbjct: 1692 VKQIAKLWR 1700>NP_003473 Length = 5537 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KQIATLWR 9 KQI LWR Sbjct: 2043 KQIMKLWR 2050>NP_055590 Length = 1211 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 489 KQVFSLWR 496>NP_001007468 Length = 1242 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 520 KQVFSLWR 527>NP_001245256 Length = 1148 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 438 KQVFSLWR 445>NP_001245255 Length = 1160 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 438 KQVFSLWR 445>NP_001245254 Length = 1187 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 465 KQVFSLWR 472>XP_005261931 Length = 871 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 520 KQVFSLWR 527>XP_006724453 Length = 1160 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 438 KQVFSLWR 445>XP_005261930 Length = 1189 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 438 KQVFSLWR 445>XP_006724452 Length = 1189 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 438 KQVFSLWR 445>XP_005261929 Length = 1240 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 489 KQVFSLWR 496>XP_005261928 Length = 1247 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 496 KQVFSLWR 503>XP_005261927 Length = 1247 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 496 KQVFSLWR 503>XP_006724451 Length = 1271 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 520 KQVFSLWR 527>XP_005261926 Length = 1271 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 520 KQVFSLWR 527>XP_005261925 Length = 1271 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KQIATLWR 9 KQ+ +LWR Sbjct: 520 KQVFSLWR 527>XP_006719679 Length = 5536 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KQIATLWR 9 KQI LWR Sbjct: 2042 KQIMKLWR 2049>XP_005269219 Length = 5537 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KQIATLWR 9 KQI LWR Sbjct: 2043 KQIMKLWR 2050>XP_006719678 Length = 5539 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KQIATLWR 9 KQI LWR Sbjct: 2045 KQIMKLWR 2052>XP_006719677 Length = 5540 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KQIATLWR 9 KQI LWR Sbjct: 2046 KQIMKLWR 2053>NP_001273589 Length = 135 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KQIATLW 8 K +ATLW Sbjct: 94 KTVATLW 100>NP_001273586 Length = 324 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KQIATLW 8 K +ATLW Sbjct: 94 KTVATLW 100>NP_689630 Length = 257 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KQIATLW 8 K +ATLW Sbjct: 94 KTVATLW 100>NP_061923 Length = 1073 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKQIATLWR 9 VK+I T W+ Sbjct: 322 VKEIGTRWK 330>XP_006716482 Length = 324 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KQIATLW 8 K +ATLW Sbjct: 94 KTVATLW 100>XP_005251207 Length = 324 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KQIATLW 8 K +ATLW Sbjct: 94 KTVATLW 100>XP_005263135 Length = 488 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKQIATLWR 9 VK+I T W+ Sbjct: 322 VKEIGTRWK 330>XP_005263134 Length = 800 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKQIATLWR 9 VK+I T W+ Sbjct: 322 VKEIGTRWK 330>XP_006714303 Length = 957 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKQIATLWR 9 VK+I T W+ Sbjct: 206 VKEIGTRWK 214>XP_005263133 Length = 1022 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKQIATLWR 9 VK+I T W+ Sbjct: 322 VKEIGTRWK 330>XP_005263131 Length = 1073 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKQIATLWR 9 VK+I T W+ Sbjct: 322 VKEIGTRWK 330>XP_005263130 Length = 1073 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKQIATLWR 9 VK+I T W+ Sbjct: 322 VKEIGTRWK 330>NP_062541 Length = 1670 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 QIATLW 8 Q+AT+W Sbjct: 281 QLATIW 286>NP_671494 Length = 1249 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 QIATLW 8 Q+AT+W Sbjct: 281 QLATIW 286>NP_006268 Length = 1697 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 QIATLW 8 Q+AT+W Sbjct: 281 QLATIW 286>NP_055289 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QIATLWR 9 QIA LW+ Sbjct: 153 QIAELWK 159>NP_001009568 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QIATLWR 9 QIA LW+ Sbjct: 153 QIAELWK 159>XP_006725609 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VKQIATLWR 9 VKQ +WR Sbjct: 512 VKQSTKIWR 520>XP_005254564 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VKQIATLWR 9 VKQ +WR Sbjct: 512 VKQSTKIWR 520>NP_000194 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 VKQIATLW 8 +KQ+ T W Sbjct: 85 IKQVRTHW 92>NP_689914 Length = 5058 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKQIATL 7 VK+IATL Sbjct: 2570 VKEIATL 2576>NP_001152869 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 QIATLWR 9 QIA +W+ Sbjct: 72 QIAAMWK 78>NP_001152870 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 QIATLWR 9 QIA +W+ Sbjct: 72 QIAAMWK 78>NP_443170 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 QIATLWR 9 QIA +W+ Sbjct: 72 QIAAMWK 78>NP_001073904 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 KQIATLW 8 +Q+A LW Sbjct: 92 RQLAALW 98>NP_000909 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 KQIATLW 8 KQ+A +W Sbjct: 401 KQLAPIW 407>XP_005272481 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 KQIATLW 8 +Q+A LW Sbjct: 92 RQLAALW 98>XP_006713944 Length = 722 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 VKQIATLW 8 +KQ+ T W Sbjct: 85 IKQVRTHW 92>XP_005244924 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 QIATLWR 9 QIA +W+ Sbjct: 72 QIAAMWK 78>XP_005244923 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 QIATLWR 9 QIA +W+ Sbjct: 72 QIAAMWK 78Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.131 0.459 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 490,890 Number of extensions: 737 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |