Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 509 NP_671714 20 509 XP_006715890 20 509 XP_005250160 20 509 XP_005250159 20 509 NP_060606 17 3301 NP_644671 17 3301 NP_009330 17 3301 NP_001193775 17 3301 XP_006712781 17 3301 NP_001138944 17 4312 NP_653213 17 4312 XP_006722454 17 4312 XP_006722453 17 4312 XP_006722452 17 4312 XP_006722451 17 4312 XP_006722450 17 4312 XP_006722449 17 4312 XP_006722448 17 4312 XP_006722447 17 4312 NP_000708 16 7355 NP_001073286 16 7355 NP_000201 16 7355 XP_005257696 16 7355 XP_006712574 16 7355 XP_006712573 16 7355 NP_115642 15 9605 NP_775321 15 9605 NP_061869 15 9605 NP_001136112 15 9605 NP_001106649 15 9605 NP_619728 15 9605 NP_006590 15 9605 NP_619727 15 9605 NP_001020436 15 9605 NP_775322 15 9605 NP_001186064 15 9605 NP_055864 15 9605 NP_597841 15 9605 NP_001273700 15 9605 NP_115593 15 9605 NP_004171 15 9605 NP_942592 15 9605 NP_060217 15 9605 NP_065741 15 9605 XP_005262301 15 9605 XP_006722063 15 9605 XP_006722062 15 9605 XP_006722061 15 9605 XP_006722060 15 9605 XP_005257605 15 9605 XP_005257604 15 9605 XP_006722059 15 9605 XP_005255834 15 9605 XP_006721188 15 9605 XP_005265730 15 9605 XP_005265729 15 9605 XP_005265728 15 9605 XP_005265724 15 9605 XP_006712777 15 9605 XP_005246268 15 9605 XP_005246267 15 9605 XP_005246265 15 9605 XP_005246264 15 9605 XP_005246263 15 9605>NP_005742 Length = 3907 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKNAGTQIN 9 VKNAG QIN Sbjct: 2799 VKNAGIQIN 2807>NP_671714 Length = 3899 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKNAGTQIN 9 VKNAG QIN Sbjct: 2791 VKNAGIQIN 2799>XP_006715890 Length = 3860 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKNAGTQIN 9 VKNAG QIN Sbjct: 2752 VKNAGIQIN 2760>XP_005250160 Length = 3939 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKNAGTQIN 9 VKNAG QIN Sbjct: 2831 VKNAGIQIN 2839>XP_005250159 Length = 3952 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKNAGTQIN 9 VKNAG QIN Sbjct: 2844 VKNAGIQIN 2852>NP_060606 Length = 3477 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VKNAGTQIN 9 VKNA Q+N Sbjct: 3134 VKNANKQVN 3142>NP_644671 Length = 712 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KNAGTQIN 9 KNAGT+ N Sbjct: 413 KNAGTRTN 420>NP_009330 Length = 750 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KNAGTQIN 9 KNAGT+ N Sbjct: 413 KNAGTRTN 420>NP_001193775 Length = 1892 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VKNAGTQIN 9 VKNA Q+N Sbjct: 1549 VKNANKQVN 1557>XP_006712781 Length = 750 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KNAGTQIN 9 KNAGT+ N Sbjct: 413 KNAGTRTN 420>NP_001138944 Length = 1114 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KNAGT N Sbjct: 76 KNAGTDAN 83>NP_653213 Length = 2211 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KNAGT N Sbjct: 1187 KNAGTDAN 1194>XP_006722454 Length = 1144 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KNAGT N Sbjct: 120 KNAGTDAN 127>XP_006722453 Length = 1162 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KNAGT N Sbjct: 76 KNAGTDAN 83>XP_006722452 Length = 1162 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KNAGT N Sbjct: 76 KNAGTDAN 83>XP_006722451 Length = 1206 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KNAGT N Sbjct: 120 KNAGTDAN 127>XP_006722450 Length = 1249 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KNAGT N Sbjct: 218 KNAGTDAN 225>XP_006722449 Length = 1256 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KNAGT N Sbjct: 218 KNAGTDAN 225>XP_006722448 Length = 1304 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KNAGT N Sbjct: 218 KNAGTDAN 225>XP_006722447 Length = 1933 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KNAGT N Sbjct: 909 KNAGTDAN 916>NP_000708 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGTQIN 9 AGTQ+N Sbjct: 172 AGTQVN 177>NP_001073286 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NAGTQI 8 NAGTQ+ Sbjct: 992 NAGTQV 997>NP_000201 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NAGTQI 8 NAGTQ+ Sbjct: 992 NAGTQV 997>XP_005257696 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGTQIN 9 AGTQ+N Sbjct: 196 AGTQVN 201>XP_006712574 Length = 1058 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NAGTQI 8 NAGTQ+ Sbjct: 977 NAGTQV 982>XP_006712573 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NAGTQI 8 NAGTQ+ Sbjct: 977 NAGTQV 982>NP_115642 Length = 1984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VKNAGTQI 8 +KN GT I Sbjct: 767 IKNPGTDI 774>NP_775321 Length = 1455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKNAGTQ 7 V+N+GTQ Sbjct: 957 VQNSGTQ 963>NP_061869 Length = 1690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGTQIN 9 AGTQ+N Sbjct: 783 AGTQLN 788>NP_001136112 Length = 1726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGTQIN 9 AGTQ+N Sbjct: 783 AGTQLN 788>NP_001106649 Length = 1548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKNAGTQ 7 V+N+GTQ Sbjct: 1050 VQNSGTQ 1056>NP_619728 Length = 1455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKNAGTQ 7 V+N+GTQ Sbjct: 957 VQNSGTQ 963>NP_006590 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKNAGTQ 7 V+N+GTQ Sbjct: 1033 VQNSGTQ 1039>NP_619727 Length = 1549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKNAGTQ 7 V+N+GTQ Sbjct: 1051 VQNSGTQ 1057>NP_001020436 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KN G Q+N Sbjct: 169 KNKGRQLN 176>NP_775322 Length = 1455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKNAGTQ 7 V+N+GTQ Sbjct: 957 VQNSGTQ 963>NP_001186064 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KN G Q+N Sbjct: 3 KNIGEQLN 10>NP_055864 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VKNAGTQIN 9 VKN G Q N Sbjct: 847 VKNPGAQEN 855>NP_597841 Length = 119 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KN G Q+N Sbjct: 3 KNIGEQLN 10>NP_001273700 Length = 2490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NAGTQIN 9 NAG +IN Sbjct: 1091 NAGAEIN 1097>NP_115593 Length = 2603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NAGTQIN 9 NAG +IN Sbjct: 1204 NAGAEIN 1210>NP_004171 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KN G Q+N Sbjct: 3 KNIGEQLN 10>NP_942592 Length = 2352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NAGTQIN 9 NAG +IN Sbjct: 953 NAGAEIN 959>NP_060217 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NAGTQIN 9 NAG +IN Sbjct: 1176 NAGAEIN 1182>NP_065741 Length = 2617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NAGTQIN 9 NAG +IN Sbjct: 1176 NAGAEIN 1182>XP_005262301 Length = 160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KN G Q+N Sbjct: 146 KNKGRQLN 153>XP_006722063 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGTQIN 9 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_006722062 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGTQIN 9 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_006722061 Length = 1913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGTQIN 9 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_006722060 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGTQIN 9 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_005257605 Length = 1926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGTQIN 9 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_005257604 Length = 1962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGTQIN 9 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_006722059 Length = 1965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGTQIN 9 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_005255834 Length = 1264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKNAGTQ 7 V+N+GTQ Sbjct: 766 VQNSGTQ 772>XP_006721188 Length = 1484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKNAGTQ 7 V+N+GTQ Sbjct: 986 VQNSGTQ 992>XP_005265730 Length = 1480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NAGTQIN 9 NAG +IN Sbjct: 1204 NAGAEIN 1210>XP_005265729 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NAGTQIN 9 NAG +IN Sbjct: 1204 NAGAEIN 1210>XP_005265728 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NAGTQIN 9 NAG +IN Sbjct: 952 NAGAEIN 958>XP_005265724 Length = 2602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NAGTQIN 9 NAG +IN Sbjct: 1203 NAGAEIN 1209>XP_006712777 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VKNAGTQIN 9 VKN G Q N Sbjct: 636 VKNPGAQEN 644>XP_005246268 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KN G Q+N Sbjct: 3 KNIGEQLN 10>XP_005246267 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KN G Q+N Sbjct: 3 KNIGEQLN 10>XP_005246265 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KN G Q+N Sbjct: 61 KNIGEQLN 68>XP_005246264 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KN G Q+N Sbjct: 110 KNIGEQLN 117>XP_005246263 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KNAGTQIN 9 KN G Q+N Sbjct: 110 KNIGEQLN 117Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.120 0.312 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 480,888 Number of extensions: 652 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |