Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055524 18 1935 NP_000590 18 1935 NP_001186091 16 5631 NP_001186090 16 5631 NP_006668 16 5631 NP_001186089 16 5631 XP_005264888 16 5631 XP_006713016 16 5631 XP_005264887 16 5631 XP_006713015 16 5631 XP_006713014 16 5631 XP_006713013 16 5631 XP_006713012 16 5631 XP_006713011 16 5631 XP_005264886 16 5631 XP_006713010 16 5631 XP_005264885 16 5631 XP_005264884 16 5631 XP_005264883 16 5631 XP_005264882 16 5631 XP_006713009 16 5631 XP_005264881 16 5631 XP_005264880 16 5631 NP_061985 16 7355 NP_077270 16 7355 NP_001153517 16 7355 NP_005260 16 7355 NP_001161081 16 7355 NP_001229436 16 7355 NP_061168 16 7355 NP_620714 16 7355 NP_001229435 16 7355 NP_001229547 16 7355 NP_001229546 16 7355 NP_001229434 16 7355 NP_057283 16 7355 NP_004284 16 7355 XP_006722681 16 7355 XP_006722680 16 7355 XP_006722679 16 7355 XP_005268856 16 7355 XP_006718519 16 7355 XP_006718518 16 7355 XP_006718517 16 7355 XP_006718516 16 7355 XP_005273885 16 7355 XP_005273884 16 7355 XP_005273883 16 7355 XP_005273882 16 7355 XP_006717389 16 7355 XP_005252374 16 7355 XP_005249355 16 7355 NP_037380 16 7355 NP_004612 15 9605 NP_079316 15 9605 NP_036277 15 9605 NP_542376 15 9605 NP_004740 15 9605 NP_004361 15 9605 NP_112162 15 9605 NP_954573 15 9605 NP_001248763 15 9605 XP_006726617 15 9605 XP_006720409 15 9605 XP_006718961 15 9605 XP_006715397 15 9605 XP_006710039 15 9605 NP_001004726 15 9605>NP_055524 Length = 3546 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKFVGGKQN 9 +K +GGK N Sbjct: 3099 IKLIGGKSN 3107>NP_000590 Length = 272 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KFVGGKQN 9 KFVGG +N Sbjct: 164 KFVGGAEN 171>NP_001186091 Length = 1372 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 154 VRFAGGQQ 161>NP_001186090 Length = 1384 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 154 VRFAGGQQ 161>NP_006668 Length = 1318 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 154 VRFAGGQQ 161>NP_001186089 Length = 1419 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 154 VRFAGGQQ 161>XP_005264888 Length = 1268 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 139 VRFAGGQQ 146>XP_006713016 Length = 1404 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 139 VRFAGGQQ 146>XP_005264887 Length = 1322 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 154 VRFAGGQQ 161>XP_006713015 Length = 1367 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 139 VRFAGGQQ 146>XP_006713014 Length = 1368 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 139 VRFAGGQQ 146>XP_006713013 Length = 1369 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 139 VRFAGGQQ 146>XP_006713012 Length = 1373 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 154 VRFAGGQQ 161>XP_006713011 Length = 1382 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 154 VRFAGGQQ 161>XP_005264886 Length = 1386 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 154 VRFAGGQQ 161>XP_006713010 Length = 1405 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 139 VRFAGGQQ 146>XP_005264885 Length = 1406 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 139 VRFAGGQQ 146>XP_005264884 Length = 1408 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 139 VRFAGGQQ 146>XP_005264883 Length = 1421 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 154 VRFAGGQQ 161>XP_005264882 Length = 1421 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 154 VRFAGGQQ 161>XP_006713009 Length = 1422 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 154 VRFAGGQQ 161>XP_005264881 Length = 1423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 154 VRFAGGQQ 161>XP_005264880 Length = 1423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 V+F GG+Q Sbjct: 154 VRFAGGQQ 161>NP_061985 Length = 2146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VKFVGGKQ 8 + FVGG Q Sbjct: 952 IAFVGGSQ 959>NP_077270 Length = 298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 +K+VGG Q Sbjct: 115 LKYVGGDQ 122>NP_001153517 Length = 978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KFVGGKQ 8 KF+GG Q Sbjct: 801 KFLGGSQ 807>NP_005260 Length = 1106 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KFVGGKQ 8 KF+GG Q Sbjct: 929 KFLGGSQ 935>NP_001161081 Length = 1065 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KFVGGKQ 8 KF+GG Q Sbjct: 888 KFLGGSQ 894>NP_001229436 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FVGGKQ 8 +VGGKQ Sbjct: 367 YVGGKQ 372>NP_061168 Length = 197 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VKFVGGKQN 9 VKF G KQ+ Sbjct: 155 VKFDGNKQH 163>NP_620714 Length = 752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FVGGKQN 9 F GGKQ+ Sbjct: 238 FAGGKQD 244>NP_001229435 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FVGGKQ 8 +VGGKQ Sbjct: 367 YVGGKQ 372>NP_001229547 Length = 114 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VKFVGGKQN 9 VKF G KQ+ Sbjct: 72 VKFDGNKQH 80>NP_001229546 Length = 142 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VKFVGGKQN 9 VKF G KQ+ Sbjct: 100 VKFDGNKQH 108>NP_001229434 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FVGGKQ 8 +VGGKQ Sbjct: 441 YVGGKQ 446>NP_057283 Length = 103 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 VKF GG++ Sbjct: 25 VKFQGGRE 32>NP_004284 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FVGGKQ 8 +VGGKQ Sbjct: 441 YVGGKQ 446>XP_006722681 Length = 1365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VKFVGGKQ 8 + FVGG Q Sbjct: 171 IAFVGGSQ 178>XP_006722680 Length = 1636 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VKFVGGKQ 8 + FVGG Q Sbjct: 952 IAFVGGSQ 959>XP_006722679 Length = 2128 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VKFVGGKQ 8 + FVGG Q Sbjct: 952 IAFVGGSQ 959>XP_005268856 Length = 978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KFVGGKQ 8 KF+GG Q Sbjct: 801 KFLGGSQ 807>XP_006718519 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FVGGKQN 9 F GGKQ+ Sbjct: 238 FAGGKQD 244>XP_006718518 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FVGGKQN 9 F GGKQ+ Sbjct: 38 FAGGKQD 44>XP_006718517 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FVGGKQN 9 F GGKQ+ Sbjct: 238 FAGGKQD 244>XP_006718516 Length = 566 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FVGGKQN 9 F GGKQ+ Sbjct: 238 FAGGKQD 244>XP_005273885 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FVGGKQN 9 F GGKQ+ Sbjct: 238 FAGGKQD 244>XP_005273884 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FVGGKQN 9 F GGKQ+ Sbjct: 238 FAGGKQD 244>XP_005273883 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FVGGKQN 9 F GGKQ+ Sbjct: 153 FAGGKQD 159>XP_005273882 Length = 679 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FVGGKQN 9 F GGKQ+ Sbjct: 238 FAGGKQD 244>XP_006717389 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FVGGKQ 8 +VGGKQ Sbjct: 441 YVGGKQ 446>XP_005252374 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FVGGKQ 8 +VGGKQ Sbjct: 441 YVGGKQ 446>XP_005249355 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKFVGGKQ 8 +K+VGG Q Sbjct: 115 LKYVGGDQ 122>NP_037380 Length = 140 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VKFVGGKQ 8 VKF G KQ Sbjct: 99 VKFEGNKQ 106>NP_004612 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 FVGGKQN 9 ++G KQN Sbjct: 659 YIGAKQN 665>NP_079316 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VKFVGGKQ 8 V+F+GG++ Sbjct: 156 VEFIGGEK 163>NP_036277 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VKFVGGKQN 9 V F G K+N Sbjct: 103 VAFTGAKEN 111>NP_542376 Length = 1899 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VGGKQN 9 +GG+QN Sbjct: 637 IGGRQN 642>NP_004740 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VKFVGGK 7 ++F+GGK Sbjct: 437 IQFLGGK 443>NP_004361 Length = 3063 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VGGKQN 9 +GG+QN Sbjct: 1801 IGGRQN 1806>NP_112162 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VKFVGGK 7 ++F+GGK Sbjct: 327 IQFLGGK 333>NP_954573 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VKFVGGK 7 ++F+GGK Sbjct: 327 IQFLGGK 333>NP_001248763 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VKFVGGK 7 ++F+GGK Sbjct: 448 IQFLGGK 454>XP_006726617 Length = 1688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFVGGKQN 9 +F+G KQN Sbjct: 1527 EFMGHKQN 1534>XP_006720409 Length = 1688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFVGGKQN 9 +F+G KQN Sbjct: 1527 EFMGHKQN 1534>XP_006718961 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 FVGGKQN 9 ++G KQN Sbjct: 659 YIGAKQN 665>XP_006715397 Length = 2972 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VGGKQN 9 +GG+QN Sbjct: 1710 IGGRQN 1715>XP_006710039 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFVGGKQN 9 +F+G KQN Sbjct: 1423 EFMGHKQN 1430>NP_001004726 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 KFVGGK 7 +F+GGK Sbjct: 298 RFIGGK 303Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.141 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 632,505 Number of extensions: 772 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |