Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 18 1135 NP_009297 18 1135 NP_001035282 18 1935 NP_060303 18 1935 XP_006725461 18 1935 XP_006724090 18 1935 NP_057090 17 3301 NP_009203 16 5631 NP_055847 16 5631 NP_848555 16 5631 NP_001077086 16 5631 NP_775961 16 5631 NP_001138349 16 5631 NP_055596 16 5631 XP_005260719 16 5631 XP_006723605 16 5631 XP_006723604 16 5631 XP_005266355 16 5631 XP_005266354 16 5631 XP_005266353 16 5631 XP_005266352 16 5631 XP_006716556 16 5631 XP_006716555 16 5631 XP_006716554 16 5631 NP_001177766 16 7355 NP_001128512 16 7355 NP_004073 16 7355 NP_075408 16 7355 NP_001128513 16 7355 NP_001177765 16 7355 NP_001804 15 9605 NP_009148 15 9605 NP_665858 15 9605 NP_665859 15 9605 NP_001238892 15 9605 NP_055931 15 9605 NP_001273663 15 9605 NP_001238891 15 9605 NP_001157683 15 9605 NP_056410 15 9605 NP_001157685 15 9605 NP_653259 15 9605 NP_940931 15 9605 XP_006725061 15 9605 XP_005262426 15 9605 XP_005262425 15 9605 XP_006721944 15 9605 XP_006721943 15 9605 XP_006721942 15 9605 XP_005247145 15 9605 XP_005247144 15 9605 XP_005247143 15 9605 XP_006713548 15 9605>NP_005148 Length = 1130 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 VKEISD VQ Sbjct: 1121 VKEISDIVQ 1129>NP_009297 Length = 1149 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 VKEISD VQ Sbjct: 1140 VKEISDIVQ 1148>NP_001035282 Length = 388 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KEISDTVQ 9 KEISDT++ Sbjct: 261 KEISDTIE 268>NP_060303 Length = 388 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KEISDTVQ 9 KEISDT++ Sbjct: 261 KEISDTIE 268>XP_006725461 Length = 388 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KEISDTVQ 9 KEISDT++ Sbjct: 261 KEISDTIE 268>XP_006724090 Length = 388 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KEISDTVQ 9 KEISDT++ Sbjct: 261 KEISDTIE 268>NP_057090 Length = 349 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 VKEI DTV Sbjct: 341 VKEICDTV 348>NP_009203 Length = 268 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EISDTVQ 9 E+SDT+Q Sbjct: 132 ELSDTIQ 138>NP_055847 Length = 1447 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 VKEISD + Sbjct: 19 VKEISDKI 26>NP_848555 Length = 197 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VKEISDTVQ 9 VKEI DT + Sbjct: 86 VKEIGDTTK 94>NP_001077086 Length = 1591 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 +KE+ DT+Q Sbjct: 988 LKELEDTLQ 996>NP_775961 Length = 629 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 VKE+SD ++ Sbjct: 225 VKELSDEIE 233>NP_001138349 Length = 606 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 VKE+SD ++ Sbjct: 202 VKELSDEIE 210>NP_055596 Length = 1594 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 +KE+ DT+Q Sbjct: 988 LKELEDTLQ 996>XP_005260719 Length = 145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VKEISDTVQ 9 VKEI DT + Sbjct: 86 VKEIGDTTK 94>XP_006723605 Length = 176 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VKEISDTVQ 9 VKEI DT + Sbjct: 64 VKEIGDTTK 72>XP_006723604 Length = 198 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VKEISDTVQ 9 VKEI DT + Sbjct: 86 VKEIGDTTK 94>XP_005266355 Length = 1448 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 VKEISD + Sbjct: 19 VKEISDKI 26>XP_005266354 Length = 1411 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 VKEISD + Sbjct: 19 VKEISDKI 26>XP_005266353 Length = 1445 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 VKEISD + Sbjct: 19 VKEISDKI 26>XP_005266352 Length = 1446 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 VKEISD + Sbjct: 19 VKEISDKI 26>XP_006716556 Length = 1048 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 +KE+ DT+Q Sbjct: 445 LKELEDTLQ 453>XP_006716555 Length = 1539 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 +KE+ DT+Q Sbjct: 936 LKELEDTLQ 944>XP_006716554 Length = 1591 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 +KE+ DT+Q Sbjct: 988 LKELEDTLQ 996>NP_001177766 Length = 1271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 +K +SDTV+ Sbjct: 1185 LKSLSDTVE 1193>NP_001128512 Length = 1253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 +K +SDTV+ Sbjct: 1167 LKSLSDTVE 1175>NP_004073 Length = 1278 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 +K +SDTV+ Sbjct: 1192 LKSLSDTVE 1200>NP_075408 Length = 1144 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 +K +SDTV+ Sbjct: 1058 LKSLSDTVE 1066>NP_001128513 Length = 1139 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 +K +SDTV+ Sbjct: 1053 LKSLSDTVE 1061>NP_001177765 Length = 1236 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 +K +SDTV+ Sbjct: 1150 LKSLSDTVE 1158>NP_001804 Length = 2701 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKEISDT 7 VKE+S+T Sbjct: 1295 VKEVSET 1301>NP_009148 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 +KE+ DTV Sbjct: 138 IKELLDTV 145>NP_665858 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 +KE+ DTV Sbjct: 138 IKELLDTV 145>NP_665859 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 +KE+ DTV Sbjct: 138 IKELLDTV 145>NP_001238892 Length = 791 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KEISDTV 8 KE+SDT+ Sbjct: 469 KELSDTM 475>NP_055931 Length = 728 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EISDTVQ 9 ++SDTVQ Sbjct: 95 DLSDTVQ 101>NP_001273663 Length = 2580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKEISDT 7 VKE+S+T Sbjct: 1270 VKEVSET 1276>NP_001238891 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KEISDTV 8 KE+SDT+ Sbjct: 469 KELSDTM 475>NP_001157683 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EISDTVQ 9 ++SDTVQ Sbjct: 95 DLSDTVQ 101>NP_056410 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KEISDTV 8 KE+SDT+ Sbjct: 469 KELSDTM 475>NP_001157685 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EISDTVQ 9 ++SDTVQ Sbjct: 95 DLSDTVQ 101>NP_653259 Length = 2073 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 VKE+SD + Sbjct: 2024 VKELSDII 2031>NP_940931 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 VKE+ +T+Q Sbjct: 30 VKELHETLQ 38>XP_006725061 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KEISDTV 8 KE+SDT+ Sbjct: 469 KELSDTM 475>XP_005262426 Length = 2055 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 VKE+SD + Sbjct: 2006 VKELSDII 2013>XP_005262425 Length = 2086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 VKE+SD + Sbjct: 2037 VKELSDII 2044>XP_006721944 Length = 1232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 VKE+ +T+Q Sbjct: 30 VKELHETLQ 38>XP_006721943 Length = 1456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 VKE+ +T+Q Sbjct: 30 VKELHETLQ 38>XP_006721942 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKEISDTVQ 9 VKE+ +T+Q Sbjct: 30 VKELHETLQ 38>XP_005247145 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 +KE+ DTV Sbjct: 138 IKELLDTV 145>XP_005247144 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 +KE+ DTV Sbjct: 138 IKELLDTV 145>XP_005247143 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 +KE+ DTV Sbjct: 138 IKELLDTV 145>XP_006713548 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKEISDTV 8 +KE+ DTV Sbjct: 138 IKELLDTV 145Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.119 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 474,718 Number of extensions: 840 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |