Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 17 3301 NP_000242 17 3301 NP_060786 17 3301 XP_006722848 17 3301 XP_005264389 17 3301 NP_001277675 17 4312 NP_001180575 17 4312 NP_036200 17 4312 NP_689807 16 5631 NP_059119 16 5631 NP_112598 16 5631 XP_005254260 16 5631 XP_005254259 16 5631 XP_005267824 16 5631 XP_005263119 16 5631 NP_059133 16 5631 NP_878274 16 7355 NP_976046 15 9605 NP_038478 15 9605 NP_001276904 15 9605 NP_000772 15 9605 NP_001093243 15 9605 NP_038477 15 9605 XP_006720468 15 9605 XP_006720467 15 9605 XP_006719271 15 9605 XP_005268661 15 9605 XP_005268660 15 9605 XP_005268659 15 9605 XP_005268657 15 9605 XP_006719270 15 9605 XP_005268656 15 9605 XP_005268654 15 9605 XP_005268653 15 9605 XP_006712537 15 9605 XP_006712536 15 9605 XP_005246557 15 9605 XP_006712535 15 9605 XP_006712534 15 9605 XP_006712533 15 9605 XP_006712532 15 9605 XP_006712531 15 9605 XP_006712530 15 9605 XP_006712529 15 9605 XP_006712528 15 9605 XP_006712527 15 9605 XP_005246549 15 9605 XP_006712526 15 9605 XP_006712525 15 9605 XP_005246546 15 9605 XP_006712524 15 9605 XP_005246545 15 9605>NP_001245210 Length = 868 Score = 16.9 bits (32), Expect = 3301 Identities = 9/10 (90%), Positives = 9/10 (90%), Gaps = 1/10 (10%) Query: 1 VKDLL-VRQY 9 VKDLL VRQY Sbjct: 23 VKDLLLVRQY 32>NP_000242 Length = 934 Score = 16.9 bits (32), Expect = 3301 Identities = 9/10 (90%), Positives = 9/10 (90%), Gaps = 1/10 (10%) Query: 1 VKDLL-VRQY 9 VKDLL VRQY Sbjct: 89 VKDLLLVRQY 98>NP_060786 Length = 615 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VKDLLVRQY 9 V+D+L RQY Sbjct: 272 VEDVLCRQY 280>XP_006722848 Length = 604 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VKDLLVRQY 9 V+D+L RQY Sbjct: 261 VEDVLCRQY 269>XP_005264389 Length = 921 Score = 16.9 bits (32), Expect = 3301 Identities = 9/10 (90%), Positives = 9/10 (90%), Gaps = 1/10 (10%) Query: 1 VKDLL-VRQY 9 VKDLL VRQY Sbjct: 89 VKDLLLVRQY 98>NP_001277675 Length = 282 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VKDLLVRQY 9 VKDLL+ Y Sbjct: 264 VKDLLIEVY 272>NP_001180575 Length = 282 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VKDLLVRQY 9 VKDLL+ Y Sbjct: 264 VKDLLIEVY 272>NP_036200 Length = 282 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VKDLLVRQY 9 VKDLL+ Y Sbjct: 264 VKDLLIEVY 272>NP_689807 Length = 444 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KDLLVRQY 9 +D+L+R+Y Sbjct: 251 RDILIRRY 258>NP_059119 Length = 657 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KDLLVRQY 9 KD++ RQY Sbjct: 105 KDIMQRQY 112>NP_112598 Length = 5088 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KDLLVRQY 9 KDL+VR++ Sbjct: 1669 KDLIVREH 1676Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KDLLVRQY 9 KDL+VR++ Sbjct: 2327 KDLIVREH 2334Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KDLLVRQY 9 KDL+VR++ Sbjct: 2863 KDLIVREH 2870Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KDLLVRQY 9 KDL+VR++ Sbjct: 3394 KDLIVREH 3401Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KDLLVRQY 9 KDL+VR++ Sbjct: 3928 KDLIVREH 3935Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KDLLVRQY 9 KDL+VR++ Sbjct: 4462 KDLIVREH 4469Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KDLLVRQY 9 KDL+VR++ Sbjct: 4995 KDLIVREH 5002>XP_005254260 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KDLLVRQY 9 +D+L+R+Y Sbjct: 177 RDILIRRY 184>XP_005254259 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KDLLVRQY 9 +D+L+R+Y Sbjct: 263 RDILIRRY 270>XP_005267824 Length = 782 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKDLLVRQY 9 ++DLL QY Sbjct: 771 IRDLLYEQY 779>XP_005263119 Length = 657 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KDLLVRQY 9 KD++ RQY Sbjct: 105 KDIMQRQY 112>NP_059133 Length = 782 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKDLLVRQY 9 ++DLL QY Sbjct: 771 IRDLLYEQY 779>NP_878274 Length = 316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKDLLVRQY 9 +K+L VR+Y Sbjct: 306 LKELTVREY 314>NP_976046 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKDLLVRQY 9 + DL+ RQY Sbjct: 410 IVDLISRQY 418>NP_038478 Length = 2168 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1135 VQDLLVR 1141>NP_001276904 Length = 2132 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1099 VQDLLVR 1105>NP_000772 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKDLLVRQY 9 V DL++R Y Sbjct: 399 VNDLVLRDY 407>NP_001093243 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKDLLVRQY 9 V DL++R Y Sbjct: 241 VNDLVLRDY 249>NP_038477 Length = 1905 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 896 VQDLLVR 902>XP_006720468 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKDLLVRQY 9 V DL++R Y Sbjct: 311 VNDLVLRDY 319>XP_006720467 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VKDLLVRQY 9 V DL++R Y Sbjct: 328 VNDLVLRDY 336>XP_006719271 Length = 1555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 915 VQDLLVR 921>XP_005268661 Length = 1657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 648 VQDLLVR 654>XP_005268660 Length = 1875 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 866 VQDLLVR 872>XP_005268659 Length = 1894 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 885 VQDLLVR 891>XP_005268657 Length = 1903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 894 VQDLLVR 900>XP_006719270 Length = 1903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 894 VQDLLVR 900>XP_005268656 Length = 1903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 894 VQDLLVR 900>XP_005268654 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 915 VQDLLVR 921>XP_005268653 Length = 1924 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 915 VQDLLVR 921>XP_006712537 Length = 1952 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1146 VQDLLVR 1152>XP_006712536 Length = 2082 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1014 VQDLLVR 1020>XP_005246557 Length = 2095 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1027 VQDLLVR 1033>XP_006712535 Length = 2095 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1027 VQDLLVR 1033>XP_006712534 Length = 2114 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1046 VQDLLVR 1052>XP_006712533 Length = 2116 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1048 VQDLLVR 1054>XP_006712532 Length = 2141 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1108 VQDLLVR 1114>XP_006712531 Length = 2169 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1101 VQDLLVR 1107>XP_006712530 Length = 2176 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1108 VQDLLVR 1114>XP_006712529 Length = 2179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1146 VQDLLVR 1152>XP_006712528 Length = 2180 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1112 VQDLLVR 1118>XP_006712527 Length = 2203 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1135 VQDLLVR 1141>XP_005246549 Length = 2212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1144 VQDLLVR 1150>XP_006712526 Length = 2212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1144 VQDLLVR 1150>XP_006712525 Length = 2212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1144 VQDLLVR 1150>XP_005246546 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1146 VQDLLVR 1152>XP_006712524 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1146 VQDLLVR 1152>XP_005246545 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VKDLLVR 7 V+DLLVR Sbjct: 1146 VQDLLVR 1152Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.149 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 500,287 Number of extensions: 882 Number of successful extensions: 58 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |