Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 19 869 NP_775656 17 3301 NP_002596 17 3301 NP_001230066 17 3301 NP_777576 17 3301 NP_001025025 17 3301 NP_001025022 17 3301 NP_003710 17 3301 XP_006720631 17 3301 XP_006720630 17 3301 XP_005254990 17 3301 XP_005248681 17 3301 XP_005248680 17 3301 XP_006714790 17 3301 XP_005248678 17 3301 XP_006714789 17 3301 XP_006714788 17 3301 NP_001025024 17 3301 NP_078886 17 4312 XP_005247819 17 4312 XP_005247818 17 4312 NP_112554 16 5631 NP_068743 16 5631 NP_001273188 16 5631 NP_001165439 16 5631 NP_542166 16 5631 NP_056357 16 5631 NP_872309 16 5631 XP_005253047 16 5631 XP_005253046 16 5631 XP_005253045 16 5631 XP_005253044 16 5631 XP_006718316 16 5631 NP_001136093 16 7355 NP_004248 16 7355 NP_057405 16 7355 XP_006712924 16 7355 XP_006712923 16 7355 NP_001034782 15 9605 NP_001122108 15 9605 NP_004531 15 9605 XP_006724072 15 9605 XP_005261045 15 9605 XP_006724071 15 9605 XP_006724070 15 9605 XP_006715792 15 9605 XP_006715791 15 9605 XP_006715790 15 9605 XP_006715789 15 9605 XP_006715788 15 9605>NP_004351 Length = 882 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VINIINADL 9 VINII+ADL Sbjct: 611 VINIIDADL 619>NP_775656 Length = 783 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 350 VINIINA 356>NP_002596 Length = 829 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 396 VINIINA 402>NP_001230066 Length = 757 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 324 VINIINA 330>NP_777576 Length = 1749 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VINIINADL 9 VIN++N D+ Sbjct: 878 VINLLNCDI 886>NP_001025025 Length = 838 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 409 VINIINA 415>NP_001025022 Length = 788 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 359 VINIINA 365>NP_003710 Length = 885 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 456 VINIINA 462>XP_006720631 Length = 582 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 396 VINIINA 402>XP_006720630 Length = 582 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 149 VINIINA 155>XP_005254990 Length = 639 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 206 VINIINA 212>XP_005248681 Length = 783 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 354 VINIINA 360>XP_005248680 Length = 784 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 355 VINIINA 361>XP_006714790 Length = 859 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 430 VINIINA 436>XP_005248678 Length = 884 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 455 VINIINA 461>XP_006714789 Length = 905 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 476 VINIINA 482>XP_006714788 Length = 906 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 477 VINIINA 483>NP_001025024 Length = 865 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VINIINA 7 VINIINA Sbjct: 436 VINIINA 442>NP_078886 Length = 488 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INIINADL 9 IN++N DL Sbjct: 220 INVVNPDL 227>XP_005247819 Length = 280 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INIINADL 9 IN++N DL Sbjct: 220 INVVNPDL 227>XP_005247818 Length = 460 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INIINADL 9 IN++N DL Sbjct: 220 INVVNPDL 227>NP_112554 Length = 651 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VINIINADL 9 V+N++ ADL Sbjct: 224 VLNVVPADL 232>NP_068743 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VINIINADL 9 V+N++ ADL Sbjct: 224 VLNVVPADL 232>NP_001273188 Length = 144 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VINIINADL 9 V+NI +ADL Sbjct: 90 VLNIASADL 98>NP_001165439 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VINIINADL 9 V+N++ ADL Sbjct: 224 VLNVVPADL 232>NP_542166 Length = 1272 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NIINAD 8 NIINAD Sbjct: 293 NIINAD 298>NP_056357 Length = 1272 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NIINAD 8 NIINAD Sbjct: 293 NIINAD 298>NP_872309 Length = 191 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VINIINADL 9 V+NI +ADL Sbjct: 137 VLNIASADL 145>XP_005253047 Length = 551 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VINIINADL 9 V+N++ ADL Sbjct: 224 VLNVVPADL 232>XP_005253046 Length = 703 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VINIINADL 9 V+N++ ADL Sbjct: 224 VLNVVPADL 232>XP_005253045 Length = 734 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VINIINADL 9 V+N++ ADL Sbjct: 224 VLNVVPADL 232>XP_005253044 Length = 765 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VINIINADL 9 V+N++ ADL Sbjct: 224 VLNVVPADL 232>XP_006718316 Length = 765 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VINIINADL 9 V+N++ ADL Sbjct: 224 VLNVVPADL 232>NP_001136093 Length = 860 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INIINADL 9 +NI+N D+ Sbjct: 510 VNIVNGDV 517>NP_004248 Length = 860 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INIINADL 9 +NI+N D+ Sbjct: 510 VNIVNGDV 517>NP_057405 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VINIINAD 8 V N+INAD Sbjct: 122 VENLINAD 129>XP_006712924 Length = 819 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INIINADL 9 +NI+N D+ Sbjct: 510 VNIVNGDV 517>XP_006712923 Length = 824 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INIINADL 9 +NI+N D+ Sbjct: 510 VNIVNGDV 517>NP_001034782 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VINIINADL 9 V+NI N DL Sbjct: 197 VLNIDNPDL 205>NP_001122108 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NIINADL 9 NI+N DL Sbjct: 157 NIVNIDL 163>NP_004531 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VINIINAD 8 V NIIN+D Sbjct: 268 VRNIINSD 275>XP_006724072 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VINIINAD 8 V NIIN+D Sbjct: 104 VRNIINSD 111>XP_005261045 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VINIINAD 8 V NIIN+D Sbjct: 104 VRNIINSD 111>XP_006724071 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VINIINAD 8 V NIIN+D Sbjct: 268 VRNIINSD 275>XP_006724070 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VINIINAD 8 V NIIN+D Sbjct: 268 VRNIINSD 275>XP_006715792 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NIINADL 9 NI+N DL Sbjct: 157 NIVNIDL 163>XP_006715791 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NIINADL 9 NI+N DL Sbjct: 157 NIVNIDL 163>XP_006715790 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NIINADL 9 NI+N DL Sbjct: 157 NIVNIDL 163>XP_006715789 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NIINADL 9 NI+N DL Sbjct: 157 NIVNIDL 163>XP_006715788 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NIINADL 9 NI+N DL Sbjct: 157 NIVNIDL 163Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.150 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 411,890 Number of extensions: 927 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |