Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 299 XP_005262424 20 299 NP_110517 17 3301 NP_001268424 17 3301 NP_055758 17 4312 NP_071427 17 4312 XP_005262232 17 4312 XP_005250893 17 4312 XP_005250894 17 4312 NP_060048 16 5631 NP_001191102 16 5631 NP_003038 16 5631 NP_733827 16 5631 NP_001028750 16 5631 NP_037389 16 5631 XP_005247608 16 5631 XP_005247606 16 5631 XP_005247195 16 5631 XP_006713576 16 5631 XP_005247194 16 5631 NP_001012337 16 5631 YP_003024027 16 5631 NP_001001344 16 7355 NP_001268231 16 7355 NP_115756 16 7355 NP_733792 16 7355 NP_733781 16 7355 NP_038464 16 7355 NP_995314 16 7355 NP_060101 16 7355 NP_689786 16 7355 NP_997273 16 7355 NP_060127 16 7355 XP_005274748 16 7355 XP_005274747 16 7355 XP_006724886 16 7355 XP_005274746 16 7355 XP_005251788 16 7355 XP_005251787 16 7355 XP_006714784 16 7355 XP_006712264 16 7355 XP_006712263 16 7355 XP_005264437 16 7355 NP_982261 16 7355 NP_001002243 16 7355 NP_001191762 15 9605 NP_001191763 15 9605 NP_001191760 15 9605 NP_060545 15 9605 NP_001191761 15 9605 NP_003238 15 9605 NP_001094058 15 9605 NP_060009 15 9605 NP_061323 15 9605 NP_056284 15 9605 XP_006721125 15 9605 XP_005265322 15 9605 NP_055040 15 9605 NP_803875 15 9605>NP_722576 Length = 3080 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VINEFTEN 8 VINEFTEN Sbjct: 2266 VINEFTEN 2273>XP_005262424 Length = 2875 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VINEFTEN 8 VINEFTEN Sbjct: 2061 VINEFTEN 2068>NP_110517 Length = 563 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VINEFTEN 8 ++N+FTEN Sbjct: 426 LLNKFTEN 433>NP_001268424 Length = 536 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VINEFTEN 8 ++N+FTEN Sbjct: 399 LLNKFTEN 406>NP_055758 Length = 837 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INEFTENL 9 +NEFTE++ Sbjct: 90 LNEFTEHV 97>NP_071427 Length = 317 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 INEFTEN 8 IN++TEN Sbjct: 245 INDYTEN 251>XP_005262232 Length = 254 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 INEFTEN 8 IN++TEN Sbjct: 182 INDYTEN 188>XP_005250893 Length = 837 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INEFTENL 9 +NEFTE++ Sbjct: 90 LNEFTEHV 97>XP_005250894 Length = 837 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INEFTENL 9 +NEFTE++ Sbjct: 90 LNEFTEHV 97>NP_060048 Length = 212 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 INEFTEN 8 +N+FT+N Sbjct: 200 VNDFTQN 206>NP_001191102 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INEFTENL 9 +NEF +NL Sbjct: 94 LNEFIQNL 101>NP_003038 Length = 815 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INEFTENL 9 + +FTENL Sbjct: 179 LRQFTENL 186>NP_733827 Length = 464 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INEFTENL 9 +NEF +NL Sbjct: 94 LNEFIQNL 101>NP_001028750 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INEFTENL 9 +NEF +NL Sbjct: 94 LNEFIQNL 101>NP_037389 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INEFTENL 9 +NEF +NL Sbjct: 94 LNEFIQNL 101>XP_005247608 Length = 120 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 INEFTEN 8 +N+FT+N Sbjct: 108 VNDFTQN 114>XP_005247606 Length = 212 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 INEFTEN 8 +N+FT+N Sbjct: 200 VNDFTQN 206>XP_005247195 Length = 120 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 INEFTEN 8 +N+FT+N Sbjct: 108 VNDFTQN 114>XP_006713576 Length = 212 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 INEFTEN 8 +N+FT+N Sbjct: 200 VNDFTQN 206>XP_005247194 Length = 212 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 INEFTEN 8 +N+FT+N Sbjct: 200 VNDFTQN 206>NP_001012337 Length = 212 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 INEFTEN 8 +N+FT+N Sbjct: 200 VNDFTQN 206>YP_003024027 Length = 347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VINEFTEN 8 +I EFT+N Sbjct: 266 IIEEFTKN 273>NP_001001344 Length = 1220 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VINEFTENL 9 +IN++T N+ Sbjct: 1148 LINDYTHNI 1156>NP_001268231 Length = 811 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VINEFTEN 8 V+ EF+EN Sbjct: 327 VLEEFSEN 334>NP_115756 Length = 779 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VINEFTEN 8 V+ EF+EN Sbjct: 295 VLEEFSEN 302>NP_733792 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VINEFTEN 8 V+ EF+EN Sbjct: 295 VLEEFSEN 302>NP_733781 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VINEFTEN 8 V+ EF+EN Sbjct: 295 VLEEFSEN 302>NP_038464 Length = 1128 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VINEFTENL 9 V+NE +NL Sbjct: 441 VLNELVQNL 449>NP_995314 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VINEFTENL 9 V+NE +NL Sbjct: 447 VLNELVQNL 455>NP_060101 Length = 1712 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VINEFTENL 9 V N FT+NL Sbjct: 828 VQNRFTKNL 836>NP_689786 Length = 740 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NEFTENL 9 NEF EN+ Sbjct: 564 NEFRENI 570>NP_997273 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VINEFTENL 9 +IN F E+L Sbjct: 291 IINSFAEHL 299>NP_060127 Length = 909 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INEFTENL 9 I+EF+EN+ Sbjct: 68 IHEFSENV 75>XP_005274748 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VINEFTENL 9 +IN++T N+ Sbjct: 1134 LINDYTHNI 1142>XP_005274747 Length = 1220 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VINEFTENL 9 +IN++T N+ Sbjct: 1148 LINDYTHNI 1156>XP_006724886 Length = 1235 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VINEFTENL 9 +IN++T N+ Sbjct: 1163 LINDYTHNI 1171>XP_005274746 Length = 1249 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VINEFTENL 9 +IN++T N+ Sbjct: 1177 LINDYTHNI 1185>XP_005251788 Length = 611 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NEFTENL 9 NEF EN+ Sbjct: 435 NEFRENI 441>XP_005251787 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NEFTENL 9 NEF EN+ Sbjct: 541 NEFRENI 547>XP_006714784 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VINEFTEN 8 V+ EF+EN Sbjct: 295 VLEEFSEN 302>XP_006712264 Length = 1126 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VINEFTENL 9 V+NE +NL Sbjct: 439 VLNELVQNL 447>XP_006712263 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VINEFTENL 9 V+NE +NL Sbjct: 445 VLNELVQNL 453>XP_005264437 Length = 937 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INEFTENL 9 I+EF+EN+ Sbjct: 68 IHEFSENV 75>NP_982261 Length = 936 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INEFTENL 9 I+EF+EN+ Sbjct: 68 IHEFSENV 75>NP_001002243 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INEFTENL 9 I+EF+EN+ Sbjct: 68 IHEFSENV 75>NP_001191762 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VINEFTE 7 V+N FTE Sbjct: 412 VLNNFTE 418>NP_001191763 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VINEFTE 7 V+N FTE Sbjct: 333 VLNNFTE 339>NP_001191760 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VINEFTE 7 V+N FTE Sbjct: 523 VLNNFTE 529>NP_060545 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VINEFTE 7 V+N FTE Sbjct: 523 VLNNFTE 529>NP_001191761 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VINEFTE 7 V+N FTE Sbjct: 457 VLNNFTE 463>NP_003238 Length = 1172 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VINEFTENL 9 ++N+ +ENL Sbjct: 286 LVNQLSENL 294>NP_001094058 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NEFTENL 9 NEF EN+ Sbjct: 19 NEFDENV 25>NP_060009 Length = 4116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EFTENL 9 EFT+NL Sbjct: 1210 EFTDNL 1215>NP_061323 Length = 1064 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NEFTENL 9 NEF EN+ Sbjct: 19 NEFDENV 25>NP_056284 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 INEFTEN 8 +NEF EN Sbjct: 49 MNEFLEN 55>XP_006721125 Length = 4070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EFTENL 9 EFT+NL Sbjct: 1164 EFTDNL 1169>XP_005265322 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VINEFTE 7 V+N FTE Sbjct: 523 VLNNFTE 529>NP_055040 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 INEFTENL 9 + EF ENL Sbjct: 306 VKEFCENL 313>NP_803875 Length = 4243 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VINEFTENL 9 ++ FTEN+ Sbjct: 3281 LVGSFTENM 3289Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.136 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 512,998 Number of extensions: 1141 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |