Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 18 1135 NP_001010860 17 3301 NP_000918 16 5631 NP_150094 16 7355 NP_001278261 16 7355 NP_001034553 16 7355 NP_056372 16 7355 NP_775105 16 7355 NP_689967 16 7355 NP_001036148 16 7355 XP_006715506 16 7355 XP_006715505 16 7355 XP_006715504 16 7355 XP_006715503 16 7355 XP_006715502 16 7355 NP_001005165 16 7355 NP_000310 15 9605 NP_001124497 15 9605 NP_001124495 15 9605 NP_001124496 15 9605 NP_001124498 15 9605 NP_001243683 15 9605 NP_001243681 15 9605 NP_001243684 15 9605 NP_001243680 15 9605 NP_001243679 15 9605 NP_001243682 15 9605 NP_057643 15 9605 NP_001243685 15 9605 NP_001128643 15 9605 NP_001128642 15 9605 NP_659415 15 9605 NP_005843 15 9605 NP_114117 15 9605 NP_001005273 15 9605 NP_060125 15 9605 XP_006725230 15 9605 XP_006721493 15 9605 XP_006721492 15 9605 XP_006721491 15 9605 XP_006721490 15 9605 XP_006721489 15 9605 XP_006721488 15 9605 XP_005256486 15 9605 XP_005256485 15 9605 XP_006721487 15 9605 XP_006721486 15 9605 XP_005256484 15 9605 XP_006720283 15 9605 XP_006719195 15 9605 XP_005253512 15 9605 XP_006719194 15 9605 XP_006719193 15 9605 XP_005253510 15 9605 XP_005253509 15 9605 XP_006719192 15 9605 XP_005253508 15 9605 XP_005247583 15 9605 XP_005247581 15 9605 XP_006713719 15 9605 XP_005263951 15 9605 XP_006712408 15 9605 XP_006712407 15 9605 XP_005271015 15 9605 XP_005271014 15 9605 XP_005271013 15 9605 XP_006710313 15 9605 NP_001005271 15 9605 NP_055839 15 9605 NP_065869 15 9605>NP_115803 Length = 1156 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VIKSEYSLG 9 VIKSEYS G Sbjct: 363 VIKSEYSPG 371>NP_001010860 Length = 674 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IKSEYSLG 9 IKS+YS+G Sbjct: 428 IKSKYSVG 435>NP_000918 Length = 1280 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VIKSEYSLG 9 V+ EYS+G Sbjct: 321 VLSGEYSIG 329>NP_150094 Length = 3564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIKSEYSLG 9 +I S+YS+G Sbjct: 2098 MINSDYSVG 2106>NP_001278261 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IKSEYSLG 9 I EYSLG Sbjct: 516 IPEEYSLG 523>NP_001034553 Length = 1323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IKSEYSLG 9 I EYSLG Sbjct: 998 IPEEYSLG 1005>NP_056372 Length = 1954 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1369 QSEYSIG 1375>NP_775105 Length = 1659 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VIKSEYSL 8 +IK EY+L Sbjct: 1044 IIKGEYAL 1051>NP_689967 Length = 777 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VIKSEYSL 8 +IK+EY L Sbjct: 643 IIKTEYGL 650>NP_001036148 Length = 1683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VIKSEYSL 8 +IK EY+L Sbjct: 1035 IIKGEYAL 1042>XP_006715506 Length = 1507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VIKSEYSL 8 +IK EY+L Sbjct: 1035 IIKGEYAL 1042>XP_006715505 Length = 1673 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VIKSEYSL 8 +IK EY+L Sbjct: 1035 IIKGEYAL 1042>XP_006715504 Length = 1683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VIKSEYSL 8 +IK EY+L Sbjct: 1035 IIKGEYAL 1042>XP_006715503 Length = 1707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VIKSEYSL 8 +IK EY+L Sbjct: 1035 IIKGEYAL 1042>XP_006715502 Length = 1707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VIKSEYSL 8 +IK EY+L Sbjct: 1035 IIKGEYAL 1042>NP_001005165 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VIKSEYSL 8 VIK+E+SL Sbjct: 50 VIKTEHSL 57>NP_000310 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 548 IRSRYNLG 555>NP_001124497 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 556 IRSRYNLG 563>NP_001124495 Length = 654 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 571 IRSRYNLG 578>NP_001124496 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 519 IRSRYNLG 526>NP_001124498 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 556 IRSRYNLG 563>NP_001243683 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 499 IRSRYNLG 506>NP_001243681 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 507 IRSRYNLG 514>NP_001243684 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 434 IRSRYNLG 441>NP_001243680 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 518 IRSRYNLG 525>NP_001243679 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 540 IRSRYNLG 547>NP_001243682 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 483 IRSRYNLG 490>NP_057643 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 542 IRSRYNLG 549>NP_001243685 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 350 IRSRYNLG 357>NP_001128643 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIKSEYSLG 9 V+KS +S+G Sbjct: 145 VLKSAFSVG 153>NP_001128642 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIKSEYSLG 9 V+KS +S+G Sbjct: 152 VLKSAFSVG 160>NP_659415 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IKSEYSLG 9 +KS Y LG Sbjct: 18 LKSRYGLG 25>NP_005843 Length = 1966 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1360 QSEYSVG 1366>NP_114117 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIKSEYSLG 9 V+KS +S+G Sbjct: 145 VLKSAFSVG 153>NP_001005273 Length = 2000 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1360 QSEYSVG 1366>NP_060125 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VIKSEYSLG 9 V KSE SLG Sbjct: 120 VYKSEDSLG 128>XP_006725230 Length = 2636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VIKSEYS 7 V+KSE+S Sbjct: 1016 VVKSEFS 1022>XP_006721493 Length = 2056 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1415 QSEYSVG 1421>XP_006721492 Length = 1924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1419 QSEYSVG 1425>XP_006721491 Length = 2025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1419 QSEYSVG 1425>XP_006721490 Length = 2036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1340 QSEYSVG 1346>XP_006721489 Length = 2045 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1419 QSEYSVG 1425>XP_006721488 Length = 2056 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1360 QSEYSVG 1366>XP_005256486 Length = 2060 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1419 QSEYSVG 1425>XP_005256485 Length = 2080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1419 QSEYSVG 1425>XP_006721487 Length = 2111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1415 QSEYSVG 1421>XP_006721486 Length = 2114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1419 QSEYSVG 1425>XP_005256484 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1419 QSEYSVG 1425>XP_006720283 Length = 2636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VIKSEYS 7 V+KSE+S Sbjct: 1016 VVKSEFS 1022>XP_006719195 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 482 IRSRYNLG 489>XP_005253512 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 540 IRSRYNLG 547>XP_006719194 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 556 IRSRYNLG 563>XP_006719193 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 565 IRSRYNLG 572>XP_005253510 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 565 IRSRYNLG 572>XP_005253509 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 577 IRSRYNLG 584>XP_006719192 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 586 IRSRYNLG 593>XP_005253508 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 586 IRSRYNLG 593>XP_005247583 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 430 IRSRYNLG 437>XP_005247581 Length = 650 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 566 IRSRYNLG 573>XP_006713719 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 I+S Y+LG Sbjct: 499 IRSRYNLG 506>XP_005263951 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IKSEYSLG 9 +KS Y LG Sbjct: 18 LKSRYGLG 25>XP_006712408 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IKSEYSLG 9 +KS Y LG Sbjct: 18 LKSRYGLG 25>XP_006712407 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IKSEYSLG 9 +KS Y LG Sbjct: 18 LKSRYGLG 25>XP_005271015 Length = 223 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VIKSEYSLG 9 V KSE SLG Sbjct: 28 VYKSEDSLG 36>XP_005271014 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VIKSEYSLG 9 V KSE SLG Sbjct: 46 VYKSEDSLG 54>XP_005271013 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VIKSEYSLG 9 V KSE SLG Sbjct: 120 VYKSEDSLG 128>XP_006710313 Length = 160 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IKSEYSLG 9 ++ EYS+G Sbjct: 126 VRGEYSVG 133>NP_001005271 Length = 2059 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSEYSLG 9 +SEYS+G Sbjct: 1419 QSEYSVG 1425>NP_055839 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IKSEYSLG 9 +KS Y LG Sbjct: 337 LKSNYQLG 344>NP_065869 Length = 2458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VIKSEYS 7 V+KSE+S Sbjct: 838 VVKSEFS 844Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.132 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 529,752 Number of extensions: 753 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |