Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 19 869 NP_653080 19 869 XP_005267292 19 869 XP_005267291 19 869 XP_005267290 19 869 NP_001243839 17 3301 NP_004719 17 3301 NP_001787 16 7355 NP_056065 16 7355 NP_055626 16 7355 NP_001705 16 7355 NP_001003800 16 7355 XP_005255817 16 7355 XP_005255816 16 7355 XP_006719197 16 7355 XP_005253522 16 7355 XP_006717405 16 7355 XP_006717404 16 7355 XP_006717403 16 7355 XP_005263469 16 7355 XP_005263468 16 7355 NP_001003398 16 7355 NP_004808 15 9605 NP_001164101 15 9605 NP_001242904 15 9605 NP_963923 15 9605 NP_112190 15 9605 NP_001008496 15 9605 NP_056467 15 9605 NP_001163886 15 9605 XP_005252372 15 9605 XP_006717387 15 9605 XP_005252371 15 9605 XP_005252370 15 9605 XP_005252369 15 9605 XP_005252368 15 9605 NP_001030014 15 9605 NP_001163885 15 9605 NP_001163887 15 9605>NP_005091 Length = 1782 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VIKANSQDA 9 VIKA+SQDA Sbjct: 1582 VIKADSQDA 1590>NP_653080 Length = 1684 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VIKANSQDA 9 VIKA+SQDA Sbjct: 1484 VIKADSQDA 1492>XP_005267292 Length = 1677 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VIKANSQDA 9 VIKA+SQDA Sbjct: 1477 VIKADSQDA 1485>XP_005267291 Length = 1684 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VIKANSQDA 9 VIKA+SQDA Sbjct: 1484 VIKADSQDA 1492>XP_005267290 Length = 1782 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VIKANSQDA 9 VIKA+SQDA Sbjct: 1582 VIKADSQDA 1590>NP_001243839 Length = 715 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIKANSQDA 9 +IKA+S+DA Sbjct: 503 IIKASSKDA 511>NP_004719 Length = 783 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIKANSQDA 9 +IKA+S+DA Sbjct: 571 IIKASSKDA 579>NP_001787 Length = 799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IKANSQD 8 +KAN QD Sbjct: 298 VKANDQD 304>NP_056065 Length = 824 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIKANSQDA 9 V+KAN Q A Sbjct: 696 VLKANKQTA 704>NP_055626 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIKANSQDA 9 V+K SQDA Sbjct: 613 VVKDGSQDA 621>NP_001705 Length = 975 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIKANSQDA 9 V+KAN Q A Sbjct: 694 VLKANKQTA 702>NP_001003800 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIKANSQDA 9 V+KAN Q A Sbjct: 696 VLKANKQTA 704>XP_005255817 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IKANSQD 8 +KAN QD Sbjct: 298 VKANDQD 304>XP_005255816 Length = 799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IKANSQD 8 +KAN QD Sbjct: 298 VKANDQD 304>XP_006719197 Length = 821 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIKANSQDA 9 V+KAN Q A Sbjct: 694 VLKANKQTA 702>XP_005253522 Length = 827 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIKANSQDA 9 V+KAN Q A Sbjct: 694 VLKANKQTA 702>XP_006717405 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIKANSQDA 9 V+K SQDA Sbjct: 613 VVKDGSQDA 621>XP_006717404 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIKANSQDA 9 V+K SQDA Sbjct: 613 VVKDGSQDA 621>XP_006717403 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIKANSQDA 9 V+K SQDA Sbjct: 613 VVKDGSQDA 621>XP_005263469 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIKANSQDA 9 V+K SQDA Sbjct: 613 VVKDGSQDA 621>XP_005263468 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIKANSQDA 9 V+K SQDA Sbjct: 613 VVKDGSQDA 621>NP_001003398 Length = 835 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIKANSQDA 9 V+KAN Q A Sbjct: 694 VLKANKQTA 702>NP_004808 Length = 1190 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VIKANSQD 8 ++K N+QD Sbjct: 555 ILKVNTQD 562>NP_001164101 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VIKANSQD 8 ++K N+QD Sbjct: 555 ILKVNTQD 562>NP_001242904 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VIKANSQ 7 ++KANSQ Sbjct: 483 MVKANSQ 489>NP_963923 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VIKANSQD 8 ++K N+QD Sbjct: 555 ILKVNTQD 562>NP_112190 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IKANSQDA 9 +KA++QDA Sbjct: 140 LKASAQDA 147>NP_001008496 Length = 882 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VIKANSQ 7 ++KANSQ Sbjct: 483 MVKANSQ 489>NP_056467 Length = 1247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKANSQDA 9 ++AN QDA Sbjct: 71 LEANEQDA 78>NP_001163886 Length = 1157 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VIKANSQD 8 ++K N+QD Sbjct: 559 ILKVNTQD 566>XP_005252372 Length = 1102 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VIKANSQD 8 ++K N+QD Sbjct: 614 ILKVNTQD 621>XP_006717387 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VIKANSQD 8 ++K N+QD Sbjct: 553 ILKVNTQD 560>XP_005252371 Length = 1194 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VIKANSQD 8 ++K N+QD Sbjct: 559 ILKVNTQD 566>XP_005252370 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VIKANSQD 8 ++K N+QD Sbjct: 614 ILKVNTQD 621>XP_005252369 Length = 1213 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VIKANSQD 8 ++K N+QD Sbjct: 578 ILKVNTQD 585>XP_005252368 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VIKANSQD 8 ++K N+QD Sbjct: 614 ILKVNTQD 621>NP_001030014 Length = 767 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IKANSQD 8 +K NSQD Sbjct: 705 LKGNSQD 711>NP_001163885 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VIKANSQD 8 ++K N+QD Sbjct: 532 ILKVNTQD 539>NP_001163887 Length = 1221 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VIKANSQD 8 ++K N+QD Sbjct: 586 ILKVNTQD 593Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.113 0.266 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 421,920 Number of extensions: 652 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |