Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155973 18 1482 NP_055903 18 1482 NP_001933 17 4312 NP_002843 17 4312 NP_689606 17 4312 NP_057710 17 4312 XP_005264923 17 4312 NP_115622 16 5631 NP_001092007 16 7355 NP_689499 16 7355 NP_997196 16 7355 NP_003460 16 7355 NP_694996 16 7355 NP_067018 16 7355 NP_055115 16 7355 NP_005089 16 7355 NP_001265227 16 7355 NP_001258851 16 7355 NP_001258848 16 7355 NP_001258849 16 7355 NP_001258847 16 7355 NP_001167589 16 7355 NP_976049 16 7355 XP_006721755 16 7355 XP_005266139 16 7355 XP_005266136 16 7355 XP_006717167 16 7355 XP_006717166 16 7355 XP_006717165 16 7355 NP_001161147 15 9605 NP_001161146 15 9605 NP_694854 15 9605 NP_001243431 15 9605 NP_001243432 15 9605 NP_001243433 15 9605 NP_001243434 15 9605 NP_001096078 15 9605 NP_001273654 15 9605 NP_065917 15 9605 XP_005266836 15 9605 XP_005247178 15 9605 XP_006713145 15 9605 XP_006713144 15 9605 NP_150596 15 9605>NP_001155973 Length = 1833 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VIFVVSGRE 9 V FVVSGRE Sbjct: 355 VNFVVSGRE 363>NP_055903 Length = 1723 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VIFVVSGRE 9 V FVVSGRE Sbjct: 355 VNFVVSGRE 363>NP_001933 Length = 1049 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 VIF +SG E Sbjct: 306 VIFFISGNE 314>NP_002843 Length = 381 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 ++FVV G E Sbjct: 245 IVFVVGGEE 253>NP_689606 Length = 621 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFVVSGRE 9 I+VV GRE Sbjct: 414 IYVVGGRE 421>NP_057710 Length = 659 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IFVVSGRE 9 IFVV+GR+ Sbjct: 276 IFVVTGRK 283>XP_005264923 Length = 585 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFVVSGRE 9 I+VV GRE Sbjct: 414 IYVVGGRE 421>NP_115622 Length = 569 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IFVVSGRE 9 +FVV+GR+ Sbjct: 110 VFVVTGRK 117>NP_001092007 Length = 1342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VIFVVSG 7 ++FVVSG Sbjct: 521 ILFVVSG 527>NP_689499 Length = 1317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VIFVVSG 7 ++FVVSG Sbjct: 496 ILFVVSG 502>NP_997196 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIFVVSGRE 9 V+F V+GR+ Sbjct: 144 VLFYVAGRD 152>NP_003460 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIFVVSGRE 9 +IF++SG E Sbjct: 18 LIFLISGAE 26>NP_694996 Length = 2526 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 VIFVVS E Sbjct: 2081 VIFVVSAGE 2089Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 VIFV+S E Sbjct: 2409 VIFVISAGE 2417>NP_067018 Length = 220 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VIFVVSG 7 ++FV+SG Sbjct: 123 IVFVISG 129>NP_055115 Length = 179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 V+F + GRE Sbjct: 83 VVFRIEGRE 91>NP_005089 Length = 206 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FVVSGR 8 FVVSGR Sbjct: 182 FVVSGR 187>NP_001265227 Length = 2614 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 VIFVVS E Sbjct: 2081 VIFVVSAGE 2089Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 VIFV+S E Sbjct: 2409 VIFVISAGE 2417>NP_001258851 Length = 185 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 V+F + GRE Sbjct: 83 VVFRIEGRE 91>NP_001258848 Length = 139 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 V+F + GRE Sbjct: 83 VVFRIEGRE 91>NP_001258849 Length = 164 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 V+F + GRE Sbjct: 83 VVFRIEGRE 91>NP_001258847 Length = 153 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 V+F + GRE Sbjct: 57 VVFRIEGRE 65>NP_001167589 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IFVVSGRE 9 +F+V+GR+ Sbjct: 223 VFIVTGRK 230>NP_976049 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IFVVSGRE 9 +F+V+GR+ Sbjct: 223 VFIVTGRK 230>XP_006721755 Length = 978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIFVVSGRE 9 V+F V+GR+ Sbjct: 138 VLFYVAGRD 146>XP_005266139 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VIFVVSG 7 ++FVVSG Sbjct: 522 ILFVVSG 528>XP_005266136 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VIFVVSG 7 ++FVVSG Sbjct: 522 ILFVVSG 528>XP_006717167 Length = 1309 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VIFVVSG 7 ++FVVSG Sbjct: 488 ILFVVSG 494>XP_006717166 Length = 1316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VIFVVSG 7 ++FVVSG Sbjct: 495 ILFVVSG 501>XP_006717165 Length = 1343 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VIFVVSG 7 ++FVVSG Sbjct: 522 ILFVVSG 528>NP_001161147 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVSGRE 9 VVSGRE Sbjct: 284 VVSGRE 289>NP_001161146 Length = 435 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVSGRE 9 VVSGRE Sbjct: 275 VVSGRE 280>NP_694854 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVSGRE 9 VVSGRE Sbjct: 277 VVSGRE 282>NP_001243431 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVSGRE 9 VVSGRE Sbjct: 167 VVSGRE 172>NP_001243432 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVSGRE 9 VVSGRE Sbjct: 167 VVSGRE 172>NP_001243433 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVSGRE 9 VVSGRE Sbjct: 167 VVSGRE 172>NP_001243434 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVSGRE 9 VVSGRE Sbjct: 167 VVSGRE 172>NP_001096078 Length = 2263 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 VIFV+S E Sbjct: 2084 VIFVISAGE 2092>NP_001273654 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IFVVSGRE 9 +FV+ GR+ Sbjct: 447 LFVIGGRD 454>NP_065917 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IFVVSGRE 9 +FV+ GR+ Sbjct: 508 LFVIGGRD 515>XP_005266836 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 V+F V GR+ Sbjct: 95 VVFKVEGRD 103>XP_005247178 Length = 2263 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 VIFV+S E Sbjct: 2084 VIFVISAGE 2092>XP_006713145 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVSGRE 9 VVSGRE Sbjct: 275 VVSGRE 280>XP_006713144 Length = 435 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVSGRE 9 VVSGRE Sbjct: 275 VVSGRE 280>NP_150596 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VIFVVSGRE 9 V+F V GR+ Sbjct: 95 VVFKVEGRD 103Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.151 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 496,643 Number of extensions: 701 Number of successful extensions: 46 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |