Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 18 1135 NP_001245324 17 3301 NP_998772 17 3301 NP_001245325 17 3301 NP_001161375 17 3301 NP_001276336 17 3301 NP_001276335 17 3301 NP_073573 17 3301 XP_006714215 17 3301 XP_006714214 17 3301 XP_005262915 17 3301 XP_006713793 17 3301 NP_055806 17 3301 NP_001191387 17 4312 NP_001191388 17 4312 NP_683760 17 4312 NP_000856 17 4312 NP_061117 17 4312 XP_005266503 17 4312 XP_005266502 17 4312 XP_005264808 17 4312 XP_005264807 17 4312 XP_005264806 17 4312 XP_005264805 17 4312 XP_005264804 17 4312 NP_000857 17 4312 NP_001135791 16 5631 NP_061325 16 5631 NP_940998 16 5631 NP_079479 16 5631 NP_001155313 16 5631 NP_997253 16 5631 XP_005260516 16 5631 XP_006723893 16 5631 XP_005260515 16 5631 XP_006723892 16 5631 XP_006723891 16 5631 XP_006723890 16 5631 XP_005259257 16 5631 XP_005259256 16 5631 NP_003361 16 5631 NP_004027 16 7355 NP_001171985 16 7355 NP_001185497 16 7355 NP_640340 16 7355 NP_001185521 16 7355 XP_006711990 16 7355 XP_005264162 16 7355 XP_005264161 16 7355 XP_005264159 16 7355 XP_006711989 16 7355 XP_006711988 16 7355 NP_005593 16 7355 NP_061751 16 7355 NP_115782 16 7355 NP_056169 15 9605 NP_061977 15 9605 XP_005256115 15 9605 XP_005256114 15 9605 XP_005256113 15 9605>NP_002430 Length = 1137 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VICSLAATI 9 VICSLAA I Sbjct: 499 VICSLAAII 507>NP_001245324 Length = 242 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VICSLAAT 8 ++CSLA+T Sbjct: 166 ILCSLAST 173>NP_998772 Length = 242 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VICSLAAT 8 ++CSLA+T Sbjct: 166 ILCSLAST 173>NP_001245325 Length = 242 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VICSLAAT 8 ++CSLA+T Sbjct: 166 ILCSLAST 173>NP_001161375 Length = 475 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VICSLAATI 9 V+C++AAT+ Sbjct: 344 VLCAVAATL 352>NP_001276336 Length = 392 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VICSLAATI 9 V+C++AAT+ Sbjct: 261 VLCAVAATL 269>NP_001276335 Length = 368 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VICSLAATI 9 V+C++AAT+ Sbjct: 237 VLCAVAATL 245>NP_073573 Length = 514 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VICSLAATI 9 V+C++AAT+ Sbjct: 383 VLCAVAATL 391>XP_006714215 Length = 3544 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ICSLAATI 9 +C+LAAT+ Sbjct: 1913 LCALAATV 1920>XP_006714214 Length = 3544 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ICSLAATI 9 +C+LAAT+ Sbjct: 1913 LCALAATV 1920>XP_005262915 Length = 3544 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ICSLAATI 9 +C+LAAT+ Sbjct: 1913 LCALAATV 1920>XP_006713793 Length = 475 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VICSLAATI 9 V+C++AAT+ Sbjct: 344 VLCAVAATL 352>NP_055806 Length = 3526 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ICSLAATI 9 +C+LAAT+ Sbjct: 1895 LCALAATV 1902>NP_001191387 Length = 417 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VICSLAATI 9 VICS AT+ Sbjct: 173 VICSALATV 181>NP_001191388 Length = 285 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VICSLAATI 9 VICS AT+ Sbjct: 41 VICSALATV 49>NP_683760 Length = 417 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VICSLAATI 9 VICS AT+ Sbjct: 173 VICSALATV 181>NP_000856 Length = 365 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VICSLAAT 8 +ICSLA T Sbjct: 60 LICSLAVT 67>NP_061117 Length = 423 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VICSLAATI 9 VICS AT+ Sbjct: 173 VICSALATV 181>XP_005266503 Length = 328 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VICSLAATI 9 VICS AT+ Sbjct: 173 VICSALATV 181>XP_005266502 Length = 423 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VICSLAATI 9 VICS AT+ Sbjct: 173 VICSALATV 181>XP_005264808 Length = 366 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VICSLAAT 8 +ICSLA T Sbjct: 61 LICSLAVT 68>XP_005264807 Length = 366 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VICSLAAT 8 +ICSLA T Sbjct: 61 LICSLAVT 68>XP_005264806 Length = 366 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VICSLAAT 8 +ICSLA T Sbjct: 61 LICSLAVT 68>XP_005264805 Length = 366 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VICSLAAT 8 +ICSLA T Sbjct: 61 LICSLAVT 68>XP_005264804 Length = 366 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VICSLAAT 8 +ICSLA T Sbjct: 61 LICSLAVT 68>NP_000857 Length = 366 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VICSLAAT 8 +ICSLA T Sbjct: 61 LICSLAVT 68>NP_001135791 Length = 622 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ICSLAATI 9 +CS+ AT+ Sbjct: 206 VCSITATV 213>NP_061325 Length = 870 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VICSLAATI 9 V+C L+AT+ Sbjct: 7 VLCLLSATV 15>NP_940998 Length = 867 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VICSLAATI 9 V+C L+AT+ Sbjct: 7 VLCLLSATV 15>NP_079479 Length = 721 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ICSLAATI 9 +CS+ AT+ Sbjct: 206 VCSITATV 213>NP_001155313 Length = 870 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VICSLAATI 9 V+C L+AT+ Sbjct: 7 VLCLLSATV 15>NP_997253 Length = 609 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VICSLAAT 8 ++C+LAAT Sbjct: 45 LLCTLAAT 52>XP_005260516 Length = 500 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VICSLAATI 9 V+C L+AT+ Sbjct: 7 VLCLLSATV 15>XP_006723893 Length = 870 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VICSLAATI 9 V+C L+AT+ Sbjct: 7 VLCLLSATV 15>XP_005260515 Length = 870 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VICSLAATI 9 V+C L+AT+ Sbjct: 7 VLCLLSATV 15>XP_006723892 Length = 871 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VICSLAATI 9 V+C L+AT+ Sbjct: 7 VLCLLSATV 15>XP_006723891 Length = 871 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VICSLAATI 9 V+C L+AT+ Sbjct: 7 VLCLLSATV 15>XP_006723890 Length = 871 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VICSLAATI 9 V+C L+AT+ Sbjct: 7 VLCLLSATV 15>XP_005259257 Length = 379 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VICSLAATI 9 VICS AT+ Sbjct: 5 VICSSRATV 13>XP_005259256 Length = 379 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VICSLAATI 9 VICS AT+ Sbjct: 5 VICSSRATV 13>NP_003361 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VICSLAATI 9 VICS AT+ Sbjct: 5 VICSSRATV 13>NP_004027 Length = 1144 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ICSLAA 7 ICSLAA Sbjct: 676 ICSLAA 681>NP_001171985 Length = 123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ICSLAATI 9 +C+L ATI Sbjct: 48 LCALVATI 55>NP_001185497 Length = 1077 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VICSLAATI 9 V+C+LAA + Sbjct: 37 VLCALAALL 45>NP_640340 Length = 1077 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VICSLAATI 9 V+C+LAA + Sbjct: 37 VLCALAALL 45>NP_001185521 Length = 1077 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VICSLAATI 9 V+C+LAA + Sbjct: 37 VLCALAALL 45>XP_006711990 Length = 1131 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ICSLAA 7 ICSLAA Sbjct: 698 ICSLAA 703>XP_005264162 Length = 1144 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ICSLAA 7 ICSLAA Sbjct: 676 ICSLAA 681>XP_005264161 Length = 1145 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ICSLAA 7 ICSLAA Sbjct: 676 ICSLAA 681>XP_005264159 Length = 1166 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ICSLAA 7 ICSLAA Sbjct: 698 ICSLAA 703>XP_006711989 Length = 1167 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ICSLAA 7 ICSLAA Sbjct: 698 ICSLAA 703>XP_006711988 Length = 1167 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ICSLAA 7 ICSLAA Sbjct: 698 ICSLAA 703>NP_005593 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ICSLAATI 9 +C+L ATI Sbjct: 132 LCALVATI 139>NP_061751 Length = 938 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VICSLAAT 8 ++CSLAA+ Sbjct: 473 LLCSLAAS 480>NP_115782 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VICSLAAT 8 ++CSLAA+ Sbjct: 473 LLCSLAAS 480>NP_056169 Length = 1749 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ICSLAAT 8 ICSLA T Sbjct: 765 ICSLAYT 771>NP_061977 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CSLAAT 8 CS+AAT Sbjct: 56 CSIAAT 61>XP_005256115 Length = 162 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ICSLAA 7 +CSLAA Sbjct: 68 VCSLAA 73>XP_005256114 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ICSLAA 7 +CSLAA Sbjct: 68 VCSLAA 73>XP_005256113 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ICSLAA 7 +CSLAA Sbjct: 68 VCSLAA 73Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.134 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 583,221 Number of extensions: 627 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |