Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005224 18 1935 NP_004422 18 1935 NP_000258 18 1935 NP_001035957 18 1935 XP_006721990 18 1935 XP_006721989 18 1935 XP_005258041 18 1935 XP_006721988 18 1935 XP_006721987 18 1935 XP_006721986 18 1935 XP_005258040 18 1935 XP_006721985 18 1935 XP_005264773 18 1935 XP_005264772 18 1935 XP_005245809 18 1935 XP_005245808 18 1935 NP_001095139 17 3301 NP_003857 17 3301 XP_006714467 17 3301 XP_005263382 17 3301 XP_005263381 17 3301 XP_006714466 17 3301 XP_005263380 17 3301 XP_006714465 17 3301 XP_005263379 17 3301 XP_006714464 17 3301 XP_006714463 17 3301 NP_001275558 17 4312 NP_004431 17 4312 XP_006715432 17 4312 XP_005248726 17 4312 NP_002882 16 5631 NP_001139120 16 5631 NP_036364 16 5631 NP_004648 16 5631 XP_005257299 16 5631 XP_006720692 16 5631 XP_006720691 16 5631 XP_006720690 16 5631 XP_005254635 16 5631 NP_001074001 16 7355 NP_689549 15 9605 NP_001122326 15 9605 NP_001122324 15 9605 NP_001122325 15 9605 NP_056992 15 9605 NP_079421 15 9605 NP_004429 15 9605 NP_758963 15 9605 NP_001268695 15 9605 NP_872272 15 9605 NP_055918 15 9605 NP_004430 15 9605 NP_001268694 15 9605 NP_001268696 15 9605 XP_005270233 15 9605 XP_005270231 15 9605 XP_005270230 15 9605 XP_005270229 15 9605 XP_005270228 15 9605 XP_006716086 15 9605 XP_005250465 15 9605 XP_005250464 15 9605 XP_005250463 15 9605 XP_005250462 15 9605 XP_005265710 15 9605 XP_005246431 15 9605>NP_005224 Length = 983 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +++ILDKLI Sbjct: 874 IVSILDKLI 882>NP_004422 Length = 976 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +++ILDKLI Sbjct: 867 IVSILDKLI 875>NP_000258 Length = 2818 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 V AILDKLI Sbjct: 1950 VTAILDKLI 1958>NP_001035957 Length = 2839 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 V AILDKLI Sbjct: 1971 VTAILDKLI 1979>XP_006721990 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 V AILDKLI Sbjct: 1981 VTAILDKLI 1989>XP_006721989 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 V AILDKLI Sbjct: 1981 VTAILDKLI 1989>XP_005258041 Length = 2836 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 V AILDKLI Sbjct: 1950 VTAILDKLI 1958>XP_006721988 Length = 2846 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 V AILDKLI Sbjct: 1960 VTAILDKLI 1968>XP_006721987 Length = 2849 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 V AILDKLI Sbjct: 1981 VTAILDKLI 1989>XP_006721986 Length = 2854 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 V AILDKLI Sbjct: 1968 VTAILDKLI 1976>XP_005258040 Length = 2857 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 V AILDKLI Sbjct: 1971 VTAILDKLI 1979>XP_006721985 Length = 2867 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 V AILDKLI Sbjct: 1981 VTAILDKLI 1989>XP_005264773 Length = 918 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +++ILDKLI Sbjct: 874 IVSILDKLI 882>XP_005264772 Length = 982 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +++ILDKLI Sbjct: 873 IVSILDKLI 881>XP_005245809 Length = 922 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +++ILDKLI Sbjct: 813 IVSILDKLI 821>XP_005245808 Length = 965 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +++ILDKLI Sbjct: 856 IVSILDKLI 864>NP_001095139 Length = 924 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +IA++DKLI Sbjct: 535 IIAMVDKLI 543>NP_003857 Length = 924 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +IA++DKLI Sbjct: 535 IIAMVDKLI 543>XP_006714467 Length = 595 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +IA++DKLI Sbjct: 544 IIAMVDKLI 552>XP_005263382 Length = 753 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +IA++DKLI Sbjct: 350 IIAMVDKLI 358>XP_005263381 Length = 762 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +IA++DKLI Sbjct: 359 IIAMVDKLI 367>XP_006714466 Length = 762 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +IA++DKLI Sbjct: 359 IIAMVDKLI 367>XP_005263380 Length = 809 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +IA++DKLI Sbjct: 406 IIAMVDKLI 414>XP_006714465 Length = 924 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +IA++DKLI Sbjct: 535 IIAMVDKLI 543>XP_005263379 Length = 933 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +IA++DKLI Sbjct: 544 IIAMVDKLI 552>XP_006714464 Length = 938 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +IA++DKLI Sbjct: 535 IIAMVDKLI 543>XP_006714463 Length = 947 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 +IA++DKLI Sbjct: 544 IIAMVDKLI 552>NP_001275558 Length = 993 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 ++ ILDK+I Sbjct: 881 IVGILDKMI 889>NP_004431 Length = 998 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 ++ ILDK+I Sbjct: 886 IVGILDKMI 894>XP_006715432 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 ++ ILDK+I Sbjct: 498 IVGILDKMI 506>XP_005248726 Length = 994 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 ++ ILDK+I Sbjct: 882 IVGILDKMI 890>NP_002882 Length = 1273 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IAILDKLI 9 I +LDKLI Sbjct: 685 IVVLDKLI 692>NP_001139120 Length = 1257 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IAILDKLI 9 I +LDKLI Sbjct: 672 IVVLDKLI 679>NP_036364 Length = 390 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 V+++LDK+I Sbjct: 54 VLSLLDKII 62>NP_004648 Length = 425 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 V+ +LDKL+ Sbjct: 58 VLTLLDKLV 66>XP_005257299 Length = 225 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VIAILDKLI 9 V+++LDK+I Sbjct: 54 VLSLLDKII 62>XP_006720692 Length = 1270 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IAILDKLI 9 I +LDKLI Sbjct: 685 IVVLDKLI 692>XP_006720691 Length = 1182 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IAILDKLI 9 I +LDKLI Sbjct: 672 IVVLDKLI 679>XP_006720690 Length = 1245 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IAILDKLI 9 I +LDKLI Sbjct: 672 IVVLDKLI 679>XP_005254635 Length = 1280 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IAILDKLI 9 I +LDKLI Sbjct: 672 IVVLDKLI 679>NP_001074001 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VIAILDKL 8 +IA+LDK+ Sbjct: 411 IIALLDKV 418>NP_689549 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 V+ ++DKL+ Sbjct: 445 VVKVIDKLL 453>NP_001122326 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 +I +LDKL+ Sbjct: 604 LIKVLDKLL 612>NP_001122324 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 +I +LDKL+ Sbjct: 604 LIKVLDKLL 612>NP_001122325 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 +I +LDKL+ Sbjct: 605 LIKVLDKLL 613>NP_056992 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 +I +LDKL+ Sbjct: 605 LIKVLDKLL 613>NP_079421 Length = 1665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IAILDKL 8 IA+LDK+ Sbjct: 1554 IAVLDKM 1560>NP_004429 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 ++ +LDKLI Sbjct: 874 IVNMLDKLI 882>NP_758963 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VIAILDKL 8 V+AILD L Sbjct: 603 VVAILDHL 610>NP_001268695 Length = 1016 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 ++ +LDKLI Sbjct: 907 IVNMLDKLI 915>NP_872272 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 ++ +LDKLI Sbjct: 906 IVNMLDKLI 914>NP_055918 Length = 1925 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 V+A+LD ++ Sbjct: 415 VVAVLDSVV 423>NP_004430 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 ++ +LDKLI Sbjct: 928 IVNMLDKLI 936>NP_001268694 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 ++ +LDKLI Sbjct: 929 IVNMLDKLI 937>NP_001268696 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 ++ +LDKLI Sbjct: 929 IVNMLDKLI 937>XP_005270233 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IAILDKL 8 IA+LDK+ Sbjct: 816 IAVLDKM 822>XP_005270231 Length = 1627 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IAILDKL 8 IA+LDK+ Sbjct: 1516 IAVLDKM 1522>XP_005270230 Length = 1627 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IAILDKL 8 IA+LDK+ Sbjct: 1516 IAVLDKM 1522>XP_005270229 Length = 1637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IAILDKL 8 IA+LDK+ Sbjct: 1526 IAVLDKM 1532>XP_005270228 Length = 1666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IAILDKL 8 IA+LDK+ Sbjct: 1555 IAVLDKM 1561>XP_006716086 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 +I +LDKL+ Sbjct: 378 LIKVLDKLL 386>XP_005250465 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 +I +LDKL+ Sbjct: 611 LIKVLDKLL 619>XP_005250464 Length = 879 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 +I +LDKL+ Sbjct: 612 LIKVLDKLL 620>XP_005250463 Length = 882 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 +I +LDKL+ Sbjct: 611 LIKVLDKLL 619>XP_005250462 Length = 883 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 +I +LDKL+ Sbjct: 612 LIKVLDKLL 620>XP_005265710 Length = 874 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 ++ +LDKLI Sbjct: 765 IVNMLDKLI 773>XP_005246431 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VIAILDKLI 9 ++ +LDKLI Sbjct: 874 IVNMLDKLI 882Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.163 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 413,168 Number of extensions: 540 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |