Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 20 299 NP_444254 20 299 NP_444253 20 299 NP_444255 20 299 XP_005247551 20 299 XP_005247550 20 299 XP_006713712 20 299 XP_005247549 20 299 NP_001188358 17 2528 NP_036427 17 2528 NP_001186210 17 2528 XP_006724247 17 2528 XP_006724246 17 2528 XP_006724245 17 2528 XP_006724244 17 2528 XP_006724243 17 2528 XP_005261477 17 2528 XP_005261476 17 2528 XP_005261474 17 2528 XP_006724242 17 2528 XP_005261473 17 2528 XP_005261472 17 2528 NP_001229713 16 5631 NP_000402 16 5631 NP_001229714 16 5631 NP_006030 16 5631 NP_055516 16 5631 NP_001180418 16 5631 XP_006724059 16 5631 XP_006724058 16 5631 XP_006724057 16 5631 XP_005261013 16 5631 XP_005261012 16 5631 XP_006724056 16 5631 XP_005261010 16 5631 NP_001165775 16 7355 NP_116233 16 7355 NP_001165774 16 7355 NP_057217 16 7355 NP_001138482 16 7355 XP_006717583 16 7355 XP_005252689 16 7355 XP_005252688 16 7355 XP_006717582 16 7355 XP_005252687 16 7355 XP_006717581 16 7355 XP_005263747 16 7355 NP_001136007 16 7355 NP_612200 15 9605 NP_060619 15 9605 NP_059142 15 9605 NP_689763 15 9605 NP_057287 15 9605 NP_001035723 15 9605 NP_998761 15 9605 XP_006724089 15 9605 XP_005250062 15 9605 XP_005250061 15 9605 XP_006716084 15 9605 XP_005250060 15 9605 XP_005250059 15 9605 XP_006714820 15 9605 XP_005268437 15 9605 NP_542984 15 9605>NP_444256 Length = 1794 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHSSQQVDF 9 VHS QQVDF Sbjct: 876 VHSPQQVDF 884>NP_444254 Length = 1845 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHSSQQVDF 9 VHS QQVDF Sbjct: 876 VHSPQQVDF 884>NP_444253 Length = 1914 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHSSQQVDF 9 VHS QQVDF Sbjct: 945 VHSPQQVDF 953>NP_444255 Length = 1863 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHSSQQVDF 9 VHS QQVDF Sbjct: 945 VHSPQQVDF 953>XP_005247551 Length = 1855 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHSSQQVDF 9 VHS QQVDF Sbjct: 886 VHSPQQVDF 894>XP_005247550 Length = 1856 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHSSQQVDF 9 VHS QQVDF Sbjct: 955 VHSPQQVDF 963>XP_006713712 Length = 1923 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHSSQQVDF 9 VHS QQVDF Sbjct: 955 VHSPQQVDF 963>XP_005247549 Length = 1924 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHSSQQVDF 9 VHS QQVDF Sbjct: 955 VHSPQQVDF 963>NP_001188358 Length = 2170 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HS+QQVD Sbjct: 916 HSAQQVD 922>NP_036427 Length = 2220 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HS+QQVD Sbjct: 966 HSAQQVD 972>NP_001186210 Length = 2220 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_006724247 Length = 1189 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_006724246 Length = 2103 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_006724245 Length = 2191 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_006724244 Length = 2191 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_006724243 Length = 2196 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_005261477 Length = 2200 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_005261476 Length = 2210 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HS+QQVD Sbjct: 921 HSAQQVD 927>XP_005261474 Length = 2225 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_006724242 Length = 2226 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_005261473 Length = 2250 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HS+QQVD Sbjct: 966 HSAQQVD 972>XP_005261472 Length = 2255 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HS+QQVD Sbjct: 966 HSAQQVD 972>NP_001229713 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VHSSQQV 7 VHS QQV Sbjct: 668 VHSGQQV 674>NP_000402 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VHSSQQV 7 VHS QQV Sbjct: 668 VHSGQQV 674>NP_001229714 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VHSSQQV 7 VHS QQV Sbjct: 668 VHSGQQV 674>NP_006030 Length = 1479 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VHSSQQVDF 9 VHS ++DF Sbjct: 863 VHSQAELDF 871>NP_055516 Length = 1056 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VHSSQQVDF 9 V +SQQ DF Sbjct: 215 VDASQQTDF 223>NP_001180418 Length = 1101 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VHSSQQVDF 9 V +SQQ DF Sbjct: 215 VDASQQTDF 223>XP_006724059 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VHSSQQV 7 VHS QQV Sbjct: 668 VHSGQQV 674>XP_006724058 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VHSSQQV 7 VHS QQV Sbjct: 668 VHSGQQV 674>XP_006724057 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VHSSQQV 7 VHS QQV Sbjct: 668 VHSGQQV 674>XP_005261013 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VHSSQQV 7 VHS QQV Sbjct: 668 VHSGQQV 674>XP_005261012 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VHSSQQV 7 VHS QQV Sbjct: 668 VHSGQQV 674>XP_006724056 Length = 821 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VHSSQQV 7 VHS QQV Sbjct: 763 VHSGQQV 769>XP_005261010 Length = 873 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VHSSQQV 7 VHS QQV Sbjct: 815 VHSGQQV 821>NP_001165775 Length = 840 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VHSSQQVD 8 VH SQQ D Sbjct: 495 VHKSQQND 502>NP_116233 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VHSSQQVD 8 VH SQQ D Sbjct: 495 VHKSQQND 502>NP_001165774 Length = 879 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VHSSQQVD 8 VH SQQ D Sbjct: 495 VHKSQQND 502>NP_057217 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HSSQQVDF 9 H+S +VDF Sbjct: 120 HASAKVDF 127>NP_001138482 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HSS+++D Sbjct: 245 HSSEEID 251>XP_006717583 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VHSSQQVD 8 VH SQQ D Sbjct: 495 VHKSQQND 502>XP_005252689 Length = 807 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VHSSQQVD 8 VH SQQ D Sbjct: 495 VHKSQQND 502>XP_005252688 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VHSSQQVD 8 VH SQQ D Sbjct: 495 VHKSQQND 502>XP_006717582 Length = 850 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VHSSQQVD 8 VH SQQ D Sbjct: 495 VHKSQQND 502>XP_005252687 Length = 883 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VHSSQQVD 8 VH SQQ D Sbjct: 495 VHKSQQND 502>XP_006717581 Length = 884 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VHSSQQVD 8 VH SQQ D Sbjct: 495 VHKSQQND 502>XP_005263747 Length = 117 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HSSQQVDF 9 H+S +VDF Sbjct: 12 HASAKVDF 19>NP_001136007 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSSQQVDF 9 HS QVDF Sbjct: 74 HSRFQVDF 81>NP_612200 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VHSSQQVDF 9 +HS VDF Sbjct: 62 IHSMATVDF 70>NP_060619 Length = 991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HSSQQVDF 9 HS QQ+ F Sbjct: 385 HSRQQLSF 392>NP_059142 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HSSQQVDF 9 HS +VDF Sbjct: 232 HSKYKVDF 239>NP_689763 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 HSSQQVD 8 HS QQ D Sbjct: 696 HSGQQTD 702>NP_057287 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HSS++VD Sbjct: 58 HSSRKVD 64>NP_001035723 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HSS++VD Sbjct: 14 HSSRKVD 20>NP_998761 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VHSSQQV 7 VHSSQ++ Sbjct: 180 VHSSQEL 186>XP_006724089 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HSSQQVDF 9 HS +VDF Sbjct: 232 HSKYKVDF 239>XP_005250062 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HSS++VD Sbjct: 58 HSSRKVD 64>XP_005250061 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HSS++VD Sbjct: 14 HSSRKVD 20>XP_006716084 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HSS++VD Sbjct: 54 HSSRKVD 60>XP_005250060 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HSS++VD Sbjct: 58 HSSRKVD 64>XP_005250059 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HSSQQVD 8 HSS++VD Sbjct: 58 HSSRKVD 64>XP_006714820 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 HSSQQVD 8 HS QQ D Sbjct: 696 HSGQQTD 702>XP_005268437 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 HSSQQVD 8 HS QQ D Sbjct: 702 HSGQQTD 708>NP_542984 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HSSQQVDF 9 HS +VDF Sbjct: 232 HSKYKVDF 239Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.123 0.341 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 523,400 Number of extensions: 843 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |