Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_671488 17 2528 NP_001186492 17 2528 NP_065712 17 2528 NP_009004 17 2528 NP_057140 17 4312 NP_001269538 17 4312 NP_005088 16 5631 NP_001093391 16 5631 NP_060646 16 5631 XP_005270329 16 5631 NP_001273130 16 7355 NP_079006 16 7355 NP_001269836 16 7355 NP_001269837 16 7355 NP_006576 16 7355 NP_037462 16 7355 NP_062559 16 7355 NP_932076 16 7355 XP_006719215 16 7355 NP_001120652 15 9605 NP_005202 15 9605 NP_000251 15 9605 NP_000531 15 9605 NP_001036188 15 9605 NP_001275634 15 9605 NP_001094101 15 9605 NP_000307 15 9605 NP_001120651 15 9605 NP_001171673 15 9605 NP_001091068 15 9605 NP_006381 15 9605 NP_079522 15 9605 NP_001010924 15 9605 NP_775899 15 9605 XP_006724177 15 9605 XP_006723382 15 9605 XP_006723381 15 9605 XP_006723380 15 9605 XP_006718624 15 9605 XP_005274069 15 9605 XP_006718623 15 9605 XP_006718622 15 9605 XP_006718621 15 9605 XP_006713837 15 9605 XP_006713836 15 9605 XP_005265401 15 9605 XP_005265400 15 9605 XP_005265399 15 9605 XP_006713335 15 9605 NP_001177924 15 9605 NP_001091069 15 9605>NP_671488 Length = 360 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VHLEMLFIR 9 +HL M+F+R Sbjct: 62 LHLHMIFLR 70>NP_001186492 Length = 360 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VHLEMLFIR 9 +HL M+F+R Sbjct: 62 LHLHMIFLR 70>NP_065712 Length = 198 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HLEMLFIR 9 H+E+LF+R Sbjct: 56 HVELLFLR 63>NP_009004 Length = 360 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VHLEMLFIR 9 +HL M+F+R Sbjct: 62 LHLHMIFLR 70>NP_057140 Length = 238 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VHLEMLFIR 9 VH+ M F+R Sbjct: 28 VHIRMAFLR 36>NP_001269538 Length = 162 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VHLEMLFIR 9 VH+ M F+R Sbjct: 28 VHIRMAFLR 36>NP_005088 Length = 557 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HLEMLFI 8 HLE LFI Sbjct: 116 HLEYLFI 122>NP_001093391 Length = 324 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLEMLF 7 HLEM+F Sbjct: 161 HLEMIF 166>NP_060646 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HLEMLFI 8 HLE LFI Sbjct: 110 HLEYLFI 116>XP_005270329 Length = 291 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HLEMLFI 8 HLE LFI Sbjct: 116 HLEYLFI 122>NP_001273130 Length = 204 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VHLEMLFIR 9 + +EM+FIR Sbjct: 158 LEVEMMFIR 166>NP_079006 Length = 205 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VHLEMLFIR 9 + +EM+FIR Sbjct: 159 LEVEMMFIR 167>NP_001269836 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HLEMLFI 8 HLE LF+ Sbjct: 40 HLEKLFV 46>NP_001269837 Length = 497 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HLEMLFI 8 HLE LF+ Sbjct: 8 HLEKLFV 14>NP_006576 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HLEMLFI 8 HLE LF+ Sbjct: 59 HLEKLFV 65>NP_037462 Length = 376 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VHLEMLFI 8 +HLE LFI Sbjct: 55 LHLEDLFI 62>NP_062559 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLEMLF 7 H+EMLF Sbjct: 56 HVEMLF 61>NP_932076 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VHLEMLFI 8 +HLE LFI Sbjct: 19 LHLEDLFI 26>XP_006719215 Length = 205 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VHLEMLFIR 9 + +EM+FIR Sbjct: 159 LEVEMMFIR 167>NP_001120652 Length = 2175 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HLEMLFIR 9 HL+ F+R Sbjct: 460 HLQQFFVR 467>NP_005202 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VHLEMLFIR 9 +HLE ++R Sbjct: 702 IHLEKKYVR 710>NP_000251 Length = 2215 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HLEMLFIR 9 HL+ F+R Sbjct: 460 HLQQFFVR 467>NP_000531 Length = 5038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LEMLFIR 9 +EMLF+R Sbjct: 1283 VEMLFLR 1289>NP_001036188 Length = 5033 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LEMLFIR 9 +EMLF+R Sbjct: 1283 VEMLFLR 1289>NP_001275634 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VHLEMLFIR 9 +HLE ++R Sbjct: 702 IHLEKKYVR 710>NP_001094101 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 HLEMLFIR 9 +L+ML++R Sbjct: 270 YLQMLYVR 277>NP_000307 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VHLEMLF 7 +H EMLF Sbjct: 441 MHYEMLF 447>NP_001120651 Length = 1178 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HLEMLFIR 9 HL+ F+R Sbjct: 460 HLQQFFVR 467>NP_001171673 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VHLEMLF 7 +H EMLF Sbjct: 441 MHYEMLF 447>NP_001091068 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LEMLFIR 9 LE++FIR Sbjct: 134 LELIFIR 140>NP_006381 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLEMLF 7 HLE+LF Sbjct: 714 HLEILF 719>NP_079522 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LEMLFIR 9 LE++FIR Sbjct: 134 LELIFIR 140>NP_001010924 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VHLEML 6 VHLEM+ Sbjct: 397 VHLEMM 402>NP_775899 Length = 4462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HLEMLFI 8 HLE +FI Sbjct: 1498 HLESIFI 1504>XP_006724177 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VHLEMLF 7 +HL++LF Sbjct: 14 IHLQILF 20>XP_006723382 Length = 5027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LEMLFIR 9 +EMLF+R Sbjct: 1283 VEMLFLR 1289>XP_006723381 Length = 5031 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LEMLFIR 9 +EMLF+R Sbjct: 1282 VEMLFLR 1288>XP_006723380 Length = 5032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LEMLFIR 9 +EMLF+R Sbjct: 1283 VEMLFLR 1289>XP_006718624 Length = 2177 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HLEMLFIR 9 HL+ F+R Sbjct: 460 HLQQFFVR 467>XP_005274069 Length = 2176 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HLEMLFIR 9 HL+ F+R Sbjct: 460 HLQQFFVR 467>XP_006718623 Length = 2189 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HLEMLFIR 9 HL+ F+R Sbjct: 460 HLQQFFVR 467>XP_006718622 Length = 2190 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HLEMLFIR 9 HL+ F+R Sbjct: 460 HLQQFFVR 467>XP_006718621 Length = 2225 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HLEMLFIR 9 HL+ F+R Sbjct: 460 HLQQFFVR 467>XP_006713837 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LEMLFIR 9 LE++FIR Sbjct: 134 LELIFIR 140>XP_006713836 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LEMLFIR 9 LE++FIR Sbjct: 134 LELIFIR 140>XP_005265401 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VHLEMLF 7 +H EMLF Sbjct: 410 MHYEMLF 416>XP_005265400 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VHLEMLF 7 +H EMLF Sbjct: 423 MHYEMLF 429>XP_005265399 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VHLEMLF 7 +H EMLF Sbjct: 441 MHYEMLF 447>XP_006713335 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VHLEMLF 7 +H EMLF Sbjct: 454 MHYEMLF 460>NP_001177924 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLEMLF 7 HLE+LF Sbjct: 509 HLEILF 514>NP_001091069 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LEMLFIR 9 LE++FIR Sbjct: 134 LELIFIR 140Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.354 0.161 0.475 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 519,036 Number of extensions: 676 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |