Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 665 NP_001263689 19 665 NP_001119584 19 665 NP_001119586 19 665 NP_001263625 19 665 NP_001119590 19 665 NP_001263690 19 665 NP_001119585 19 665 NP_001263624 19 665 NP_001119588 19 665 NP_001119587 19 665 NP_001119589 19 665 NP_064581 17 2528 NP_001263627 16 5631 NP_001263628 16 5631 NP_001263626 16 5631 NP_003310 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_001193976 16 7355 NP_001484 16 7355 NP_647537 16 7355 NP_647538 16 7355 NP_001485 16 7355 NP_001108628 16 7355 XP_005260918 16 7355 XP_005260917 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_612455 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_001186681 15 9605 NP_001129524 15 9605 NP_689572 15 9605 NP_001186682 15 9605 XP_006723073 15 9605 XP_006723072 15 9605 XP_005258564 15 9605 XP_005258563 15 9605 XP_005258562 15 9605>NP_000537 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHAMAIYKQ 9 V AMAIYKQ Sbjct: 157 VRAMAIYKQ 165>NP_001263689 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHAMAIYKQ 9 V AMAIYKQ Sbjct: 118 VRAMAIYKQ 126>NP_001119584 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHAMAIYKQ 9 V AMAIYKQ Sbjct: 157 VRAMAIYKQ 165>NP_001119586 Length = 341 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHAMAIYKQ 9 V AMAIYKQ Sbjct: 157 VRAMAIYKQ 165>NP_001263625 Length = 302 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHAMAIYKQ 9 V AMAIYKQ Sbjct: 118 VRAMAIYKQ 126>NP_001119590 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHAMAIYKQ 9 V AMAIYKQ Sbjct: 118 VRAMAIYKQ 126>NP_001263690 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHAMAIYKQ 9 V AMAIYKQ Sbjct: 118 VRAMAIYKQ 126>NP_001119585 Length = 346 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHAMAIYKQ 9 V AMAIYKQ Sbjct: 157 VRAMAIYKQ 165>NP_001263624 Length = 307 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHAMAIYKQ 9 V AMAIYKQ Sbjct: 118 VRAMAIYKQ 126>NP_001119588 Length = 209 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHAMAIYKQ 9 V AMAIYKQ Sbjct: 25 VRAMAIYKQ 33>NP_001119587 Length = 261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHAMAIYKQ 9 V AMAIYKQ Sbjct: 25 VRAMAIYKQ 33>NP_001119589 Length = 214 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VHAMAIYKQ 9 V AMAIYKQ Sbjct: 25 VRAMAIYKQ 33>NP_064581 Length = 855 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HAMAIYKQ 9 HAMA+Y++ Sbjct: 611 HAMAVYER 618>NP_001263627 Length = 182 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MAIYKQ 9 MAIYKQ Sbjct: 1 MAIYKQ 6>NP_001263628 Length = 187 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MAIYKQ 9 MAIYKQ Sbjct: 1 MAIYKQ 6>NP_001263626 Length = 234 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MAIYKQ 9 MAIYKQ Sbjct: 1 MAIYKQ 6>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HAMAIYKQ 9 HA A Y+Q Sbjct: 25685 HAQAAYRQ 25692>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HAMAIYKQ 9 HA A Y+Q Sbjct: 25810 HAQAAYRQ 25817>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HAMAIYKQ 9 HA A Y+Q Sbjct: 33109 HAQAAYRQ 33116>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HAMAIYKQ 9 HA A Y+Q Sbjct: 32182 HAQAAYRQ 32189>NP_001193976 Length = 1156 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HAMAIYK 8 H++A+YK Sbjct: 279 HSLALYK 285>NP_001484 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HAMAIYK 8 HA+A+Y+ Sbjct: 187 HALALYR 193>NP_647537 Length = 1429 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HAMAIYK 8 H++A+YK Sbjct: 395 HSLALYK 401>NP_647538 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HAMAIYK 8 H++A+YK Sbjct: 395 HSLALYK 401>NP_001485 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HAMAIYK 8 HA+A+Y+ Sbjct: 187 HALALYR 193>NP_001108628 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HAMAIYK 8 HA+A+Y+ Sbjct: 142 HALALYR 148>XP_005260918 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HAMAIYK 8 H++A+YK Sbjct: 395 HSLALYK 401>XP_005260917 Length = 1289 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HAMAIYK 8 H++A+YK Sbjct: 395 HSLALYK 401>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HAMAIYKQ 9 HA A Y+Q Sbjct: 21422 HAQAAYRQ 21429>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HAMAIYKQ 9 HA A Y+Q Sbjct: 22781 HAQAAYRQ 22788>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HAMAIYKQ 9 HA A Y+Q Sbjct: 32737 HAQAAYRQ 32744>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HAMAIYKQ 9 HA A Y+Q Sbjct: 34243 HAQAAYRQ 34250>NP_612455 Length = 234 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VHAMAIY 7 +HAMA Y Sbjct: 135 LHAMAFY 141>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HAMAIYKQ 9 HA A Y+Q Sbjct: 34750 HAQAAYRQ 34757>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HAMAIYKQ 9 HA A Y+Q Sbjct: 25877 HAQAAYRQ 25884>NP_001186681 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VHAMAIYK 8 VHA+ +Y+ Sbjct: 276 VHALLLYR 283>NP_001129524 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VHAMAIYK 8 VHA+ +Y+ Sbjct: 265 VHALLLYR 272>NP_689572 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VHAMAIYK 8 VHA+ +Y+ Sbjct: 276 VHALLLYR 283>NP_001186682 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VHAMAIYK 8 VHA+ +Y+ Sbjct: 276 VHALLLYR 283>XP_006723073 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VHAMAIYK 8 VHA+ +Y+ Sbjct: 276 VHALLLYR 283>XP_006723072 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VHAMAIYK 8 VHA+ +Y+ Sbjct: 114 VHALLLYR 121>XP_005258564 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VHAMAIYK 8 VHA+ +Y+ Sbjct: 276 VHALLLYR 283>XP_005258563 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VHAMAIYK 8 VHA+ +Y+ Sbjct: 276 VHALLLYR 283>XP_005258562 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VHAMAIYK 8 VHA+ +Y+ Sbjct: 276 VHALLLYR 283Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.129 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 429,701 Number of extensions: 580 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |