Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_361014 20 299 NP_001243998 20 299 NP_000771 17 2528 XP_006723584 17 3301 XP_006723583 17 3301 XP_006723582 17 3301 XP_005248275 17 3301 XP_006710114 17 3301 NP_001073291 17 4312 NP_000417 17 4312 NP_001398 17 4312 NP_919289 17 4312 NP_937791 17 4312 XP_005251508 17 4312 XP_005251507 17 4312 XP_005267039 17 4312 XP_005267038 17 4312 NP_056139 16 5631 NP_000255 16 5631 NP_001258966 16 5631 NP_006141 16 5631 NP_659428 16 5631 XP_005261214 16 5631 NP_751895 16 7355 NP_004691 16 7355 NP_116206 16 7355 NP_006363 16 7355 NP_001265578 16 7355 NP_001095869 16 7355 NP_001095868 16 7355 NP_001095867 16 7355 NP_005817 16 7355 NP_001158001 16 7355 NP_085046 16 7355 NP_476518 16 7355 NP_001001851 16 7355 NP_995585 16 7355 NP_001153147 16 7355 XP_005259268 16 7355 XP_005248694 16 7355 XP_005248693 16 7355 XP_005246331 16 7355 XP_005246330 16 7355 XP_005245771 16 7355 XP_005245769 16 7355 XP_005245770 16 7355 XP_005245768 16 7355 NP_001073938 16 7355 NP_001158002 16 7355 NP_001157999 16 7355 NP_009065 16 7355 NP_005804 15 9605 NP_036211 15 9605 NP_002733 15 9605 NP_001073351 15 9605 NP_001073350 15 9605 NP_001073349 15 9605 NP_057541 15 9605 NP_078950 15 9605 XP_005258773 15 9605 XP_005267916 15 9605 XP_006715904 15 9605 XP_006715903 15 9605 XP_006712043 15 9605 XP_006712042 15 9605 XP_006712041 15 9605 XP_005264295 15 9605 XP_005264294 15 9605 XP_006710963 15 9605 XP_006710962 15 9605 XP_006710046 15 9605 NP_066971 15 9605>NP_361014 Length = 707 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VGSKRRQTG 9 VGSKRR+TG Sbjct: 8 VGSKRRRTG 16>NP_001243998 Length = 176 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VGSKRRQTG 9 VGSKRR+TG Sbjct: 8 VGSKRRRTG 16>NP_000771 Length = 504 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VGSKRRQTG 9 +G +RRQTG Sbjct: 22 LGIRRRQTG 30>XP_006723584 Length = 641 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 VG +RR TG Sbjct: 331 VGHRRRHTG 339>XP_006723583 Length = 641 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 VG +RR TG Sbjct: 331 VGHRRRHTG 339>XP_006723582 Length = 641 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 VG +RR TG Sbjct: 331 VGHRRRHTG 339>XP_005248275 Length = 136 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VGSKRRQTG 9 VG+KR+Q G Sbjct: 127 VGNKRKQHG 135>XP_006710114 Length = 423 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 VG +RR TG Sbjct: 113 VGHRRRHTG 121>NP_001073291 Length = 3118 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KRRQTG 9 KRRQTG Sbjct: 2573 KRRQTG 2578>NP_000417 Length = 3122 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KRRQTG 9 KRRQTG Sbjct: 2577 KRRQTG 2582>NP_001398 Length = 3312 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGSKRRQTG 9 +GS+ R+TG Sbjct: 118 LGSRERETG 126>NP_919289 Length = 1368 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 GSK R TG Sbjct: 410 GSKERSTG 417>NP_937791 Length = 756 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 G KRRQ G Sbjct: 749 GQKRRQRG 756>XP_005251508 Length = 1007 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 GSK R TG Sbjct: 49 GSKERSTG 56>XP_005251507 Length = 1079 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 GSK R TG Sbjct: 121 GSKERSTG 128>XP_005267039 Length = 3206 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KRRQTG 9 KRRQTG Sbjct: 2661 KRRQTG 2666>XP_005267038 Length = 3210 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KRRQTG 9 KRRQTG Sbjct: 2665 KRRQTG 2670>NP_056139 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GSKRRQ 7 GSKRRQ Sbjct: 34 GSKRRQ 39>NP_000255 Length = 1447 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKRRQTG 9 G +RR+TG Sbjct: 30 GGRRRRTG 37>NP_001258966 Length = 601 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 VGS+RR G Sbjct: 132 VGSRRRAKG 140>NP_006141 Length = 615 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GSKRRQTG 9 GS+RR++G Sbjct: 5 GSRRRRSG 12>NP_659428 Length = 669 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 VGS+RR G Sbjct: 200 VGSRRRAKG 208>XP_005261214 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 VGS+RR G Sbjct: 132 VGSRRRAKG 140>NP_751895 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGSKRRQTG 9 +GS +R+TG Sbjct: 388 MGSSQRRTG 396>NP_004691 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGSKRRQTG 9 +GS +R+TG Sbjct: 442 MGSSQRRTG 450>NP_116206 Length = 728 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGSKRRQT 8 VG+K RQT Sbjct: 93 VGTKLRQT 100>NP_006363 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKRRQT 8 SKRRQT Sbjct: 575 SKRRQT 580>NP_001265578 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKRRQTG 9 G +RRQ+G Sbjct: 304 GPRRRQSG 311>NP_001095869 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKRRQT 8 SKRRQT Sbjct: 485 SKRRQT 490>NP_001095868 Length = 636 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKRRQT 8 SKRRQT Sbjct: 586 SKRRQT 591>NP_001095867 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKRRQT 8 SKRRQT Sbjct: 482 SKRRQT 487>NP_005817 Length = 633 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKRRQT 8 SKRRQT Sbjct: 583 SKRRQT 588>NP_001158001 Length = 115 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 +GS+RR G Sbjct: 3 LGSRRRSVG 11>NP_085046 Length = 942 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGSKRRQT 8 VG+K RQT Sbjct: 307 VGTKLRQT 314>NP_476518 Length = 1136 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKRRQTG 9 G+K R+TG Sbjct: 515 GNKSRETG 522>NP_001001851 Length = 702 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGSKRRQT 8 VG+K RQT Sbjct: 307 VGTKLRQT 314>NP_995585 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKRRQTG 9 G+K R+TG Sbjct: 515 GNKSRETG 522>NP_001153147 Length = 588 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKRRQT 8 SKRRQT Sbjct: 540 SKRRQT 545>XP_005259268 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 +GS+RR G Sbjct: 3 LGSRRRSVG 11>XP_005248694 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKRRQT 8 SKRRQT Sbjct: 575 SKRRQT 580>XP_005248693 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKRRQT 8 SKRRQT Sbjct: 477 SKRRQT 482>XP_005246331 Length = 1006 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKRRQTG 9 G+K R+TG Sbjct: 316 GNKSRETG 323>XP_005246330 Length = 1205 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKRRQTG 9 G+K R+TG Sbjct: 515 GNKSRETG 522>XP_005245771 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKRRQT 8 SKRRQT Sbjct: 444 SKRRQT 449>XP_005245769 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKRRQT 8 SKRRQT Sbjct: 545 SKRRQT 550>XP_005245770 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKRRQT 8 SKRRQT Sbjct: 545 SKRRQT 550>XP_005245768 Length = 633 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKRRQT 8 SKRRQT Sbjct: 583 SKRRQT 588>NP_001073938 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 VGS+RR G Sbjct: 213 VGSERRSGG 221>NP_001158002 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 +GS+RR G Sbjct: 3 LGSRRRSVG 11>NP_001157999 Length = 123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 +GS+RR G Sbjct: 3 LGSRRRSVG 11>NP_009065 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 +GS+RR G Sbjct: 3 LGSRRRSVG 11>NP_005804 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 G K R+TG Sbjct: 592 GGKHRKTG 599>NP_036211 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKRRQTG 9 S+RR+TG Sbjct: 7 SRRRRTG 13>NP_002733 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 G K R+TG Sbjct: 599 GGKHRKTG 606>NP_001073351 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 G K R+TG Sbjct: 410 GGKHRKTG 417>NP_001073350 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 G K R+TG Sbjct: 567 GGKHRKTG 574>NP_001073349 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 G K R+TG Sbjct: 567 GGKHRKTG 574>NP_057541 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 G K R+TG Sbjct: 567 GGKHRKTG 574>NP_078950 Length = 209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 +GS+RR G Sbjct: 118 IGSERRPKG 126>XP_005258773 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 G K R+TG Sbjct: 410 GGKHRKTG 417>XP_005267916 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 G K R+TG Sbjct: 607 GGKHRKTG 614>XP_006715904 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRRQTG 9 K+RQTG Sbjct: 132 KKRQTG 137>XP_006715903 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRRQTG 9 K+RQTG Sbjct: 132 KKRQTG 137>XP_006712043 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 G K R+TG Sbjct: 333 GGKHRKTG 340>XP_006712042 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 G K R+TG Sbjct: 419 GGKHRKTG 426>XP_006712041 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 G K R+TG Sbjct: 419 GGKHRKTG 426>XP_005264295 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 G K R+TG Sbjct: 488 GGKHRKTG 495>XP_005264294 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSKRRQTG 9 G K R+TG Sbjct: 592 GGKHRKTG 599>XP_006710963 Length = 209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 +GS+RR G Sbjct: 118 IGSERRPKG 126>XP_006710962 Length = 209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGSKRRQTG 9 +GS+RR G Sbjct: 118 IGSERRPKG 126>XP_006710046 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKRRQTG 9 GS+RR+ G Sbjct: 376 GSRRRRCG 383Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKRRQTG 9 GS+RR+ G Sbjct: 397 GSRRRRCG 404Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GSKRRQTG 9 GS+RR+ G Sbjct: 411 GSRRRRCG 418>NP_066971 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRRQTG 9 K+RQTG Sbjct: 197 KKRQTG 202Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.128 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 637,649 Number of extensions: 1547 Number of successful extensions: 74 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |