Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 390 NP_859049 17 2528 NP_001269781 17 2528 NP_659449 17 2528 NP_001269782 17 2528 NP_001269783 17 2528 NP_001135772 17 2528 XP_005252445 17 2528 XP_006717455 17 2528 XP_005246400 17 2528 NP_689736 17 2528 NP_004685 17 4312 NP_001167637 17 4312 NP_000005 17 4312 XP_006722232 17 4312 XP_005257846 17 4312 XP_006719119 17 4312 NP_690867 17 4312 NP_004360 16 7355 NP_476508 16 7355 NP_476507 16 7355 NP_004659 16 7355 NP_001075019 16 7355 XP_006724836 16 7355 XP_005262507 16 7355 XP_006724835 16 7355 XP_006724834 16 7355 XP_006724833 16 7355 XP_006724832 16 7355 XP_006724831 16 7355 XP_006724830 16 7355 XP_005262504 16 7355 XP_006716232 16 7355 XP_006716231 16 7355 XP_005246123 16 7355 XP_005246122 16 7355 XP_006712316 16 7355 NP_001185797 15 9605 NP_005177 15 9605 NP_001185798 15 9605 NP_006421 15 9605 NP_001243650 15 9605 NP_872358 15 9605 NP_001189479 15 9605 NP_001032 15 9605 NP_001107578 15 9605 NP_001245271 15 9605 NP_001245269 15 9605 NP_689582 15 9605 NP_001245270 15 9605 NP_001245272 15 9605 NP_001099133 15 9605 NP_443120 15 9605 NP_056540 15 9605 NP_001164209 15 9605 NP_001230589 15 9605 NP_001230590 15 9605 XP_006718761 15 9605 XP_006715498 15 9605 XP_006715497 15 9605 XP_006715496 15 9605 XP_005270500 15 9605 XP_005270498 15 9605 XP_005270497 15 9605 NP_056047 15 9605>NP_004295 Length = 1620 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VGLLQFNLN 9 VGLLQFNL+ Sbjct: 163 VGLLQFNLS 171>NP_859049 Length = 287 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLQFNLN 9 LLQFN+N Sbjct: 205 LLQFNIN 211>NP_001269781 Length = 316 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLQFNLN 9 LLQFN+N Sbjct: 234 LLQFNIN 240>NP_659449 Length = 341 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLQFNLN 9 LLQFN+N Sbjct: 259 LLQFNIN 265>NP_001269782 Length = 287 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLQFNLN 9 LLQFN+N Sbjct: 205 LLQFNIN 211>NP_001269783 Length = 208 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLQFNLN 9 LLQFN+N Sbjct: 126 LLQFNIN 132>NP_001135772 Length = 308 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLQFNLN 9 LLQFN+N Sbjct: 228 LLQFNIN 234>XP_005252445 Length = 294 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLQFNLN 9 LLQFN+N Sbjct: 212 LLQFNIN 218>XP_006717455 Length = 317 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLQFNLN 9 LLQFN+N Sbjct: 235 LLQFNIN 241>XP_005246400 Length = 359 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLQFNLN 9 LLQFN+N Sbjct: 279 LLQFNIN 285>NP_689736 Length = 289 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLQFNLN 9 LLQFN+N Sbjct: 209 LLQFNIN 215>NP_004685 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGLLQFNL 8 VGLLQ N+ Sbjct: 186 VGLLQLNI 193>NP_001167637 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGLLQFNL 8 VGLLQ N+ Sbjct: 186 VGLLQLNI 193>NP_000005 Length = 1474 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GLLQFNLN 9 GL+QF++N Sbjct: 403 GLVQFSIN 410>XP_006722232 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGLLQFNL 8 VGLLQ N+ Sbjct: 186 VGLLQLNI 193>XP_005257846 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGLLQFNL 8 VGLLQ N+ Sbjct: 186 VGLLQLNI 193>XP_006719119 Length = 1512 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GLLQFNLN 9 GL+QF++N Sbjct: 403 GLVQFSIN 410>NP_690867 Length = 674 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VGLLQFNLN 9 +GLLQF+ N Sbjct: 602 LGLLQFDSN 610>NP_004360 Length = 3177 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VGLLQFN 7 VGL+Q+N Sbjct: 1678 VGLVQYN 1684>NP_476508 Length = 2971 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VGLLQFN 7 VGL+Q+N Sbjct: 1472 VGLVQYN 1478>NP_476507 Length = 2570 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VGLLQFN 7 VGL+Q+N Sbjct: 1071 VGLVQYN 1077>NP_004659 Length = 1857 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GLLQFNL 8 G+L+FNL Sbjct: 642 GVLEFNL 648>NP_001075019 Length = 1593 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LLQFNL 8 LLQFNL Sbjct: 273 LLQFNL 278>XP_006724836 Length = 1582 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LLQFNL 8 LLQFNL Sbjct: 273 LLQFNL 278>XP_005262507 Length = 1594 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LLQFNL 8 LLQFNL Sbjct: 273 LLQFNL 278>XP_006724835 Length = 1615 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LLQFNL 8 LLQFNL Sbjct: 273 LLQFNL 278>XP_006724834 Length = 1615 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LLQFNL 8 LLQFNL Sbjct: 273 LLQFNL 278>XP_006724833 Length = 1620 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LLQFNL 8 LLQFNL Sbjct: 273 LLQFNL 278>XP_006724832 Length = 1640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LLQFNL 8 LLQFNL Sbjct: 273 LLQFNL 278>XP_006724831 Length = 1640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LLQFNL 8 LLQFNL Sbjct: 273 LLQFNL 278>XP_006724830 Length = 1642 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LLQFNL 8 LLQFNL Sbjct: 273 LLQFNL 278>XP_005262504 Length = 1642 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LLQFNL 8 LLQFNL Sbjct: 273 LLQFNL 278>XP_006716232 Length = 2753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GLLQFNL 8 G+L+FNL Sbjct: 642 GVLEFNL 648>XP_006716231 Length = 2753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GLLQFNL 8 G+L+FNL Sbjct: 642 GVLEFNL 648>XP_005246123 Length = 2770 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VGLLQFN 7 VGL+Q+N Sbjct: 1271 VGLVQYN 1277>XP_005246122 Length = 2977 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VGLLQFN 7 VGL+Q+N Sbjct: 1478 VGLVQYN 1484>XP_006712316 Length = 3010 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VGLLQFN 7 VGL+Q+N Sbjct: 1511 VGLVQYN 1517>NP_001185797 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VGLLQFNL 8 +GL++FN+ Sbjct: 605 LGLVEFNI 612>NP_005177 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VGLLQFNL 8 +GL++FN+ Sbjct: 605 LGLVEFNI 612>NP_001185798 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VGLLQFNL 8 +GL++FN+ Sbjct: 605 LGLVEFNI 612>NP_006421 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGLLQFNLN 9 +GL+QF L+ Sbjct: 246 IGLIQFCLS 254>NP_001243650 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGLLQFNLN 9 +GL+QF L+ Sbjct: 216 IGLIQFCLS 224>NP_872358 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VGLLQFNL 8 VGL FNL Sbjct: 357 VGLFVFNL 364>NP_001189479 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VGLLQFNL 8 VGL FNL Sbjct: 230 VGLFVFNL 237>NP_001032 Length = 1827 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LQFNLN 9 +QFNLN Sbjct: 1743 VQFNLN 1748>NP_001107578 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GLLQFNLN 9 GL+ FN N Sbjct: 551 GLMAFNYN 558>NP_001245271 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GLLQFNLN 9 GL+ FN N Sbjct: 515 GLMAFNYN 522>NP_001245269 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GLLQFNLN 9 GL+ FN N Sbjct: 550 GLMAFNYN 557>NP_689582 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GLLQFNLN 9 GL+ FN N Sbjct: 503 GLMAFNYN 510>NP_001245270 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GLLQFNLN 9 GL+ FN N Sbjct: 518 GLMAFNYN 525>NP_001245272 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GLLQFNLN 9 GL+ FN N Sbjct: 483 GLMAFNYN 490>NP_001099133 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LQFNLN 9 +QFNLN Sbjct: 212 VQFNLN 217>NP_443120 Length = 947 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGLLQFNL 8 VGL QF+L Sbjct: 255 VGLSQFHL 262>NP_056540 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VGLLQFNL 8 + LLQFN+ Sbjct: 191 IQLLQFNI 198>NP_001164209 Length = 1182 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGLLQFNLN 9 +GL FN+N Sbjct: 657 IGLNLFNIN 665>NP_001230589 Length = 223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LQFNLN 9 +QFNLN Sbjct: 197 VQFNLN 202>NP_001230590 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LQFNLN 9 +QFNLN Sbjct: 159 VQFNLN 164>XP_006718761 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VGLLQFNL 8 +GL++FN+ Sbjct: 605 LGLVEFNI 612>XP_006715498 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VGLLQFNL 8 VGL FNL Sbjct: 230 VGLFVFNL 237>XP_006715497 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VGLLQFNL 8 VGL FNL Sbjct: 230 VGLFVFNL 237>XP_006715496 Length = 497 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VGLLQFNL 8 VGL FNL Sbjct: 230 VGLFVFNL 237>XP_005270500 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GLLQFNLN 9 GL+ FN N Sbjct: 471 GLMAFNYN 478>XP_005270498 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GLLQFNLN 9 GL+ FN N Sbjct: 503 GLMAFNYN 510>XP_005270497 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GLLQFNLN 9 GL+ FN N Sbjct: 519 GLMAFNYN 526>NP_056047 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGLLQFNLN 9 +GL FN+N Sbjct: 354 IGLNLFNIN 362Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.152 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 508,026 Number of extensions: 978 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |