Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 19 665 NP_001186804 17 4312 XP_005245596 17 4312 NP_003559 17 4312 NP_940857 17 4312 NP_001269727 16 5631 NP_001269729 16 5631 NP_001269728 16 5631 NP_056176 16 5631 NP_059984 16 5631 NP_060212 16 5631 XP_006724893 16 5631 XP_005274763 16 5631 XP_006724892 16 5631 XP_005274762 16 5631 XP_006722557 16 5631 XP_006722556 16 5631 XP_005263689 16 5631 XP_005263688 16 5631 XP_006712454 16 5631 XP_005263686 16 5631 XP_005263685 16 5631 XP_005263684 16 5631 XP_005263683 16 5631 XP_005263681 16 5631 XP_005263680 16 5631 XP_006712453 16 5631 XP_005263679 16 5631 XP_006712452 16 5631 NP_001139669 16 5631 NP_004817 16 7355 NP_001277716 16 7355 NP_001254 16 7355 NP_001123367 16 7355 XP_005262744 16 7355 XP_005263976 16 7355 NP_006579 16 7355 NP_004371 15 9605 NP_001073315 15 9605 NP_001068567 15 9605 NP_003717 15 9605 NP_002198 15 9605 NP_940918 15 9605 NP_066923 15 9605 NP_001185918 15 9605 NP_874358 15 9605 NP_060349 15 9605 NP_001180473 15 9605 NP_001146 15 9605 XP_005259108 15 9605 XP_005257813 15 9605 XP_005257814 15 9605 XP_005257812 15 9605 XP_005255182 15 9605 XP_006720911 15 9605 XP_005255181 15 9605 XP_006718287 15 9605 XP_005268489 15 9605 XP_006713200 15 9605 NP_976248 15 9605>NP_115803 Length = 1156 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGIMQPTAQ 9 VG MQPTAQ Sbjct: 808 VGNMQPTAQ 816>NP_001186804 Length = 170 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP A+ Sbjct: 40 VGVQQPNAE 48>XP_005245596 Length = 362 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGIMQPTAQ 9 + ++QPTAQ Sbjct: 108 MALLQPTAQ 116>NP_003559 Length = 345 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGIMQPTAQ 9 + ++QPTAQ Sbjct: 108 MALLQPTAQ 116>NP_940857 Length = 5147 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 GIMQPTAQ 9 G+++PTA+ Sbjct: 1162 GVLEPTAE 1169>NP_001269727 Length = 1100 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 699 VGVQQPQSQ 707>NP_001269729 Length = 1044 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 643 VGVQQPQSQ 651>NP_001269728 Length = 971 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 570 VGVQQPQSQ 578>NP_056176 Length = 1099 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 698 VGVQQPQSQ 706>NP_059984 Length = 1871 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VGIMQP 6 VG+MQP Sbjct: 696 VGVMQP 701>NP_060212 Length = 1178 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGIMQPTA 8 VGI+ PTA Sbjct: 770 VGILGPTA 777>XP_006724893 Length = 1719 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VGIMQP 6 VG+MQP Sbjct: 696 VGVMQP 701>XP_005274763 Length = 1789 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VGIMQP 6 VG+MQP Sbjct: 614 VGVMQP 619>XP_006724892 Length = 1841 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VGIMQP 6 VG+MQP Sbjct: 696 VGVMQP 701>XP_005274762 Length = 1853 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VGIMQP 6 VG+MQP Sbjct: 696 VGVMQP 701>XP_006722557 Length = 1076 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGIMQPTA 8 VGI+ PTA Sbjct: 668 VGILGPTA 675>XP_006722556 Length = 1100 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGIMQPTA 8 VGI+ PTA Sbjct: 692 VGILGPTA 699>XP_005263689 Length = 887 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 486 VGVQQPQSQ 494>XP_005263688 Length = 948 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 699 VGVQQPQSQ 707>XP_006712454 Length = 999 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 598 VGVQQPQSQ 606>XP_005263686 Length = 1014 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 613 VGVQQPQSQ 621>XP_005263685 Length = 1015 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 614 VGVQQPQSQ 622>XP_005263684 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 636 VGVQQPQSQ 644>XP_005263683 Length = 1038 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 637 VGVQQPQSQ 645>XP_005263681 Length = 1056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 655 VGVQQPQSQ 663>XP_005263680 Length = 1056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 655 VGVQQPQSQ 663>XP_006712453 Length = 1084 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 683 VGVQQPQSQ 691>XP_005263679 Length = 1086 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 685 VGVQQPQSQ 693>XP_006712452 Length = 1100 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP +Q Sbjct: 699 VGVQQPQSQ 707>NP_001139669 Length = 7081 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIMQPTAQ 9 G +QPTAQ Sbjct: 5003 GPVQPTAQ 5010>NP_004817 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GIMQPT 7 GI+QPT Sbjct: 586 GILQPT 591>NP_001277716 Length = 773 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GIMQPT 7 GI+QPT Sbjct: 584 GILQPT 589>NP_001254 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GIMQPT 7 GI+QPT Sbjct: 453 GILQPT 458>NP_001123367 Length = 171 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIMQPTA 8 G+M PTA Sbjct: 126 GVMTPTA 132>XP_005262744 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GIMQPT 7 GI+QPT Sbjct: 413 GILQPT 418>XP_005263976 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GIMQPT 7 GI+QPT Sbjct: 24 GILQPT 29>NP_006579 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GIMQPT 7 GI+QPT Sbjct: 24 GILQPT 29>NP_004371 Length = 2442 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP AQ Sbjct: 808 VGMGQPPAQ 816>NP_001073315 Length = 2404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP AQ Sbjct: 770 VGMGQPPAQ 778>NP_001068567 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VGI +PT + Sbjct: 256 VGIKEPTEE 264>NP_003717 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VGI +PT + Sbjct: 256 VGIKEPTEE 264>NP_002198 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIMQPTA 8 GIM PT+ Sbjct: 775 GIMSPTS 781>NP_940918 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VGIMQPT 7 VGI+ PT Sbjct: 516 VGILSPT 522>NP_066923 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 +G+ QP A+ Sbjct: 209 IGVKQPIAE 217>NP_001185918 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 +G+ QP A+ Sbjct: 158 IGVKQPIAE 166>NP_874358 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VGIMQPT 7 VGI++PT Sbjct: 240 VGIVKPT 246>NP_060349 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VGIMQPTA 8 +GI+QP A Sbjct: 184 LGILQPQA 191>NP_001180473 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VGIMQPTA 8 VG+M+P A Sbjct: 55 VGLMRPPA 62>NP_001146 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VGIMQPTA 8 VG+M+P A Sbjct: 87 VGLMRPPA 94>XP_005259108 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VGIMQPTA 8 +GI+QP A Sbjct: 112 LGILQPQA 119>XP_005257813 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VGI +PT + Sbjct: 162 VGIKEPTEE 170>XP_005257814 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VGI +PT + Sbjct: 162 VGIKEPTEE 170>XP_005257812 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VGI +PT + Sbjct: 256 VGIKEPTEE 264>XP_005255182 Length = 2303 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP AQ Sbjct: 808 VGMGQPPAQ 816>XP_006720911 Length = 2355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP AQ Sbjct: 808 VGMGQPPAQ 816>XP_005255181 Length = 2427 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGIMQPTAQ 9 VG+ QP AQ Sbjct: 793 VGMGQPPAQ 801>XP_006718287 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VGIMQPT 7 VGI+ PT Sbjct: 454 VGILSPT 460>XP_005268489 Length = 667 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VGIMQPTA 8 VG+M+P A Sbjct: 87 VGLMRPPA 94>XP_006713200 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GIMQPTAQ 9 G +QPT+Q Sbjct: 3 GPLQPTSQ 10>NP_976248 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GIMQPTAQ 9 G +QPT+Q Sbjct: 32 GPLQPTSQ 39Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.129 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 723,400 Number of extensions: 992 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |