Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 20 390 NP_005913 20 390 XP_005267046 20 390 XP_005267045 20 390 NP_077719 17 4312 NP_001030025 17 4312 NP_000319 17 4312 NP_001036064 17 4312 NP_005226 17 4312 NP_060647 17 4312 XP_005272690 17 4312 XP_006724601 17 4312 XP_006714086 17 4312 XP_006714085 17 4312 XP_006714084 17 4312 XP_005246434 17 4312 XP_005246433 17 4312 XP_005246432 17 4312 XP_006712427 17 4312 XP_005270959 17 4312 XP_005270958 17 4312 XP_006710730 17 4312 NP_057287 16 5631 NP_077747 16 5631 NP_001035723 16 5631 XP_006716351 16 5631 XP_005250066 16 5631 XP_005250064 16 5631 XP_005250063 16 5631 XP_005250062 16 5631 XP_005250061 16 5631 XP_006716084 16 5631 XP_005250060 16 5631 XP_005250059 16 5631 NP_001743 16 7355 NP_079071 16 7355 NP_060310 16 7355 NP_001231509 15 9605 NP_003487 15 9605 NP_002301 15 9605 NP_001121143 15 9605 NP_006435 15 9605 NP_001036016 15 9605 NP_001252531 15 9605 NP_115518 15 9605 NP_004669 15 9605 NP_001036015 15 9605 XP_006722394 15 9605 XP_005258167 15 9605 XP_006722393 15 9605 XP_006722392 15 9605 XP_006722391 15 9605 XP_006722390 15 9605 XP_005258166 15 9605 XP_006722389 15 9605 XP_005258165 15 9605 XP_005258164 15 9605 XP_006716996 15 9605 NP_001002761 15 9605 NP_001002760 15 9605>NP_006715 Length = 1558 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 +GIKNLSDI Sbjct: 414 LGIKNLSDI 422>NP_005913 Length = 1608 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 +GIKNLSDI Sbjct: 414 LGIKNLSDI 422>XP_005267046 Length = 1554 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 +GIKNLSDI Sbjct: 414 LGIKNLSDI 422>XP_005267045 Length = 1604 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 +GIKNLSDI Sbjct: 414 LGIKNLSDI 422>NP_077719 Length = 2471 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VGIKNLS 7 VG+KNLS Sbjct: 1735 VGLKNLS 1741>NP_001030025 Length = 1152 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 +G+KN+S++ Sbjct: 172 IGLKNVSNV 180>NP_000319 Length = 815 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 +G+KN+S++ Sbjct: 172 IGLKNVSNV 180>NP_001036064 Length = 1292 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 +G+KNL++I Sbjct: 134 LGLKNLTEI 142>NP_005226 Length = 1308 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 +G+KNL++I Sbjct: 134 LGLKNLTEI 142>NP_060647 Length = 1770 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VG+KN +DI Sbjct: 1226 VGLKNNNDI 1234>XP_005272690 Length = 704 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 +G+KN+S++ Sbjct: 172 IGLKNVSNV 180>XP_006724601 Length = 1020 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 +G+KN+S++ Sbjct: 172 IGLKNVSNV 180>XP_006714086 Length = 1690 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VG+KN +DI Sbjct: 1146 VGLKNNNDI 1154>XP_006714085 Length = 1690 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VG+KN +DI Sbjct: 1146 VGLKNNNDI 1154>XP_006714084 Length = 1753 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VG+KN +DI Sbjct: 1226 VGLKNNNDI 1234>XP_005246434 Length = 1282 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 +G+KNL++I Sbjct: 134 LGLKNLTEI 142>XP_005246433 Length = 1298 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 +G+KNL++I Sbjct: 134 LGLKNLTEI 142>XP_005246432 Length = 1307 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 +G+KNL++I Sbjct: 134 LGLKNLTEI 142>XP_006712427 Length = 1323 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 +G+KNL++I Sbjct: 134 LGLKNLTEI 142>XP_005270959 Length = 2432 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VGIKNLS 7 VG+KNLS Sbjct: 1696 VGLKNLS 1702>XP_005270958 Length = 2432 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VGIKNLS 7 VG+KNLS Sbjct: 1696 VGLKNLS 1702>XP_006710730 Length = 2432 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VGIKNLS 7 VG+KNLS Sbjct: 1696 VGLKNLS 1702>NP_057287 Length = 569 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VGI +LSDI Sbjct: 542 VGIISLSDI 550>NP_077747 Length = 328 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VGI +LSDI Sbjct: 301 VGIISLSDI 309>NP_001035723 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VGI +LSDI Sbjct: 498 VGIISLSDI 506>XP_006716351 Length = 865 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIKNLSDI 9 GI+N SDI Sbjct: 298 GIENASDI 305>XP_005250066 Length = 358 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VGI +LSDI Sbjct: 281 VGIISLSDI 289>XP_005250064 Length = 444 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VGI +LSDI Sbjct: 417 VGIISLSDI 425>XP_005250063 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VGI +LSDI Sbjct: 418 VGIISLSDI 426>XP_005250062 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VGI +LSDI Sbjct: 541 VGIISLSDI 549>XP_005250061 Length = 575 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VGI +LSDI Sbjct: 498 VGIISLSDI 506>XP_006716084 Length = 615 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VGI +LSDI Sbjct: 538 VGIISLSDI 546>XP_005250060 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VGI +LSDI Sbjct: 541 VGIISLSDI 549>XP_005250059 Length = 619 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 VGI +LSDI Sbjct: 542 VGIISLSDI 550>NP_001743 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GIKNLS 7 GIKNLS Sbjct: 241 GIKNLS 246>NP_079071 Length = 229 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKNLSDI 9 +KN+SDI Sbjct: 130 LKNISDI 136>NP_060310 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KNLSDI 9 KNLSDI Sbjct: 67 KNLSDI 72>NP_001231509 Length = 3859 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 VG++N+S++ Sbjct: 3380 VGLENVSNV 3388>NP_003487 Length = 3830 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VGIKNLSDI 9 VG++N+S++ Sbjct: 3351 VGLENVSNV 3359>NP_002301 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 + +KN++DI Sbjct: 783 IKVKNITDI 791>NP_001121143 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VGIKNLSDI 9 + +KN++DI Sbjct: 783 IKVKNITDI 791>NP_006435 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIKNLSDI 9 +GI NLS + Sbjct: 49 LGISNLSQV 57>NP_001036016 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIKNLSDI 9 +GI NLS + Sbjct: 49 LGISNLSQV 57>NP_001252531 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIKNLSDI 9 +GI NLS + Sbjct: 49 LGISNLSQV 57>NP_115518 Length = 2537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIKNLSD 8 G+K LSD Sbjct: 1888 GVKKLSD 1894>NP_004669 Length = 106 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KNLSDI 9 KNLSD+ Sbjct: 40 KNLSDV 45>NP_001036015 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIKNLSDI 9 +GI NLS + Sbjct: 49 LGISNLSQV 57>XP_006722394 Length = 1845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIKNLSD 8 G+K LSD Sbjct: 1195 GVKKLSD 1201>XP_005258167 Length = 1856 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIKNLSD 8 G+K LSD Sbjct: 1206 GVKKLSD 1212>XP_006722393 Length = 2199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIKNLSD 8 G+K LSD Sbjct: 1549 GVKKLSD 1555>XP_006722392 Length = 2444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIKNLSD 8 G+K LSD Sbjct: 1794 GVKKLSD 1800>XP_006722391 Length = 2448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIKNLSD 8 G+K LSD Sbjct: 1798 GVKKLSD 1804>XP_006722390 Length = 2467 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIKNLSD 8 G+K LSD Sbjct: 1818 GVKKLSD 1824>XP_005258166 Length = 2468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIKNLSD 8 G+K LSD Sbjct: 1818 GVKKLSD 1824>XP_006722389 Length = 2506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIKNLSD 8 G+K LSD Sbjct: 1888 GVKKLSD 1894>XP_005258165 Length = 2534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIKNLSD 8 G+K LSD Sbjct: 1884 GVKKLSD 1890>XP_005258164 Length = 2538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIKNLSD 8 G+K LSD Sbjct: 1888 GVKKLSD 1894>XP_006716996 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGIKNLSDI 9 +GI NLS + Sbjct: 49 LGISNLSQV 57>NP_001002761 Length = 106 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KNLSDI 9 KNLSD+ Sbjct: 40 KNLSDV 45>NP_001002760 Length = 106 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KNLSDI 9 KNLSD+ Sbjct: 40 KNLSDV 45Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.144 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 443,885 Number of extensions: 811 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |