Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 19 665 NP_005896 17 3301 NP_001120689 17 3301 XP_005266461 17 3301 XP_005266460 17 3301 XP_005266458 17 3301 XP_006719890 17 3301 NP_055858 17 4312 NP_942568 17 4312 NP_001263200 16 7355 NP_005179 16 7355 NP_001263201 16 7355 NP_003916 16 7355 NP_001263199 16 7355 NP_001245380 16 7355 NP_872629 16 7355 NP_061756 16 7355 NP_001245379 16 7355 NP_003438 16 7355 XP_006721039 16 7355 XP_005255732 16 7355 XP_006715242 16 7355 XP_005249428 16 7355 XP_005249429 16 7355 XP_005249430 16 7355 NP_004194 16 7355 NP_694573 16 7355 NP_694563 16 7355 NP_000087 15 9605 NP_001238831 15 9605 NP_003976 15 9605 NP_002763 15 9605 NP_001124430 15 9605 NP_006086 15 9605 NP_001103132 15 9605 NP_057160 15 9605 NP_689804 15 9605 NP_001273173 15 9605 NP_001436 15 9605 NP_002820 15 9605 NP_001273172 15 9605 NP_001138840 15 9605 XP_006719326 15 9605 XP_006719325 15 9605 XP_006717854 15 9605 XP_006717263 15 9605 XP_006717262 15 9605 XP_006717261 15 9605 XP_006717260 15 9605 XP_006714893 15 9605 XP_006714892 15 9605 XP_006714891 15 9605 XP_006713565 15 9605 XP_006713564 15 9605 XP_006713563 15 9605 XP_006713562 15 9605 NP_001035532 15 9605>NP_005350 Length = 552 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGETFKVTS 9 VGETFKV S Sbjct: 335 VGETFKVPS 343>NP_005896 Length = 430 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VGETFKVTS 9 VGETF+ +S Sbjct: 248 VGETFQASS 256>NP_001120689 Length = 467 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VGETFKVTS 9 VGETF+ +S Sbjct: 285 VGETFQASS 293>XP_005266461 Length = 356 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VGETFKVTS 9 VGETF+ +S Sbjct: 162 VGETFQASS 170>XP_005266460 Length = 393 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VGETFKVTS 9 VGETF+ +S Sbjct: 199 VGETFQASS 207>XP_005266458 Length = 442 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VGETFKVTS 9 VGETF+ +S Sbjct: 248 VGETFQASS 256>XP_006719890 Length = 479 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VGETFKVTS 9 VGETF+ +S Sbjct: 285 VGETFQASS 293>NP_055858 Length = 1233 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VGETFKV 7 +GETFK+ Sbjct: 234 IGETFKL 240>NP_942568 Length = 1250 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VGETFKV 7 +GETFK+ Sbjct: 234 IGETFKL 240>NP_001263200 Length = 572 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GETFKVTS 9 GET VTS Sbjct: 297 GETLSVTS 304>NP_005179 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 GETFKVT 8 G+TF++T Sbjct: 176 GDTFRIT 182>NP_001263201 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GETFKVTS 9 GET VTS Sbjct: 297 GETLSVTS 304>NP_003916 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GETFKVTS 9 GET VTS Sbjct: 297 GETLSVTS 304>NP_001263199 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GETFKVTS 9 GET VTS Sbjct: 297 GETLSVTS 304>NP_001245380 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GETFKVTS 9 GE FKV S Sbjct: 113 GEVFKVRS 120>NP_872629 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GETFKVTS 9 GE FKV S Sbjct: 122 GEVFKVRS 129>NP_061756 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VGETFKV 7 +G+TFK+ Sbjct: 289 IGKTFKI 295>NP_001245379 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GETFKVTS 9 GE FKV S Sbjct: 53 GEVFKVRS 60>NP_003438 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GETFKVTS 9 G+TF+V+S Sbjct: 434 GKTFRVSS 441>XP_006721039 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GETFKVTS 9 GE FKV S Sbjct: 122 GEVFKVRS 129>XP_005255732 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GETFKVTS 9 GE FKV S Sbjct: 131 GEVFKVRS 138>XP_006715242 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GETFKVTS 9 G+TF+V+S Sbjct: 260 GKTFRVSS 267>XP_005249428 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GETFKVTS 9 G+TF+V+S Sbjct: 434 GKTFRVSS 441>XP_005249429 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GETFKVTS 9 G+TF+V+S Sbjct: 434 GKTFRVSS 441>XP_005249430 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GETFKVTS 9 G+TF+V+S Sbjct: 434 GKTFRVSS 441>NP_004194 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GETFKVTS 9 GE FKV S Sbjct: 122 GEVFKVRS 129>NP_694573 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GETFKVTS 9 G+TF+V+S Sbjct: 167 GKTFRVSS 174>NP_694563 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GETFKVTS 9 G+TF+V+S Sbjct: 259 GKTFRVSS 266>NP_000087 Length = 1065 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 VG+T +VT Sbjct: 457 VGDTIRVT 464>NP_001238831 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GETFKVTS 9 G TFKV S Sbjct: 427 GRTFKVGS 434>NP_003976 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GETFKVTS 9 G TFKV S Sbjct: 422 GRTFKVGS 429>NP_002763 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TFKVTS 9 TFK+TS Sbjct: 61 TFKITS 66>NP_001124430 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETFKVT 8 G+TFK T Sbjct: 126 GKTFKAT 132>NP_006086 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGETFKVTS 9 VGE KVT+ Sbjct: 153 VGEIVKVTN 161>NP_001103132 Length = 4284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VGETFK 6 +GETFK Sbjct: 1232 MGETFK 1237>NP_057160 Length = 194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VGETFK 6 +GETFK Sbjct: 63 LGETFK 68>NP_689804 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 +GET KVT Sbjct: 432 LGETGKVT 439>NP_001273173 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 +GET KVT Sbjct: 353 LGETGKVT 360>NP_001436 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETFKVT 8 G+TFK T Sbjct: 77 GKTFKAT 83>NP_002820 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 V +TFKVT Sbjct: 39 VVQTFKVT 46>NP_001273172 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 +GET KVT Sbjct: 392 LGETGKVT 399>NP_001138840 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 V +TFKVT Sbjct: 39 VVQTFKVT 46>XP_006719326 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 +GET KVT Sbjct: 432 LGETGKVT 439>XP_006719325 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 +GET KVT Sbjct: 432 LGETGKVT 439>XP_006717854 Length = 2852 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VGETFKV 7 VGE FKV Sbjct: 2831 VGEGFKV 2837>XP_006717263 Length = 885 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 V +TFKVT Sbjct: 56 VVQTFKVT 63>XP_006717262 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 V +TFKVT Sbjct: 39 VVQTFKVT 46>XP_006717261 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 V +TFKVT Sbjct: 39 VVQTFKVT 46>XP_006717260 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 V +TFKVT Sbjct: 50 VVQTFKVT 57>XP_006714893 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETFKVT 8 G+TFK T Sbjct: 77 GKTFKAT 83>XP_006714892 Length = 149 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETFKVT 8 G+TFK T Sbjct: 98 GKTFKAT 104>XP_006714891 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETFKVT 8 G+TFK T Sbjct: 126 GKTFKAT 132>XP_006713565 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 VG+T +VT Sbjct: 457 VGDTIRVT 464>XP_006713564 Length = 1065 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 VG+T +VT Sbjct: 457 VGDTIRVT 464>XP_006713563 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 VG+T +VT Sbjct: 457 VGDTIRVT 464>XP_006713562 Length = 1090 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VGETFKVT 8 VG+T +VT Sbjct: 457 VGDTIRVT 464>NP_001035532 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETFKVT 8 G+TFK T Sbjct: 126 GKTFKAT 132Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.125 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 466,017 Number of extensions: 683 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |