Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001277144 20 509 NP_001277143 20 509 NP_001077383 20 509 NP_001320 20 509 NP_073713 20 509 XP_005269629 20 509 XP_005269628 20 509 XP_005269627 20 509 XP_005269626 20 509 XP_006717706 20 509 XP_005269625 20 509 XP_005269624 20 509 XP_006717705 20 509 XP_005269622 20 509 XP_005269621 20 509 XP_006717704 20 509 XP_005269619 20 509 XP_005269618 20 509 NP_001319 18 1135 NP_001012632 18 1135 XP_005272320 18 1135 XP_005272319 18 1135 XP_005272318 18 1135 NP_005597 17 4312 NP_001008530 17 4312 XP_005267920 17 4312 XP_005267919 17 4312 NP_005236 16 5631 NP_563615 16 5631 NP_071417 16 5631 XP_006714202 16 5631 XP_005262892 16 5631 XP_005262891 16 5631 NP_003213 16 7355 NP_878314 16 7355 NP_665735 16 7355 NP_665734 16 7355 NP_665707 16 7355 NP_055160 16 7355 NP_001247440 16 7355 NP_064696 16 7355 NP_733751 15 9605 XP_006716142 15 9605 XP_005250088 15 9605 XP_006716141 15 9605 XP_005250085 15 9605 XP_006716140 15 9605 XP_005250084 15 9605 XP_005250083 15 9605 XP_005250082 15 9605>NP_001277144 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>NP_001277143 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>NP_001077383 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>NP_001320 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>NP_073713 Length = 985 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 617 VGAMMYHTI 625>XP_005269629 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>XP_005269628 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>XP_005269627 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>XP_005269626 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>XP_006717706 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>XP_005269625 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>XP_005269624 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>XP_006717705 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>XP_005269622 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>XP_005269621 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>XP_006717704 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>XP_005269619 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>XP_005269618 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGAMM HTI Sbjct: 77 VGAMMYHTI 85>NP_001319 Length = 440 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGA+M HTI Sbjct: 71 VGALMYHTI 79>NP_001012632 Length = 429 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGA+M HTI Sbjct: 60 VGALMYHTI 68>XP_005272320 Length = 430 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGA+M HTI Sbjct: 60 VGALMYHTI 68>XP_005272319 Length = 430 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGA+M HTI Sbjct: 60 VGALMYHTI 68>XP_005272318 Length = 441 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VGA+M HTI Sbjct: 71 VGALMYHTI 79>NP_005597 Length = 433 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GAMMNH 7 G+MMNH Sbjct: 192 GSMMNH 197>NP_001008530 Length = 433 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GAMMNH 7 G+MMNH Sbjct: 192 GSMMNH 197>XP_005267920 Length = 372 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GAMMNH 7 G+MMNH Sbjct: 192 GSMMNH 197>XP_005267919 Length = 376 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GAMMNH 7 G+MMNH Sbjct: 192 GSMMNH 197>NP_005236 Length = 4588 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MMNHTI 9 M+NHTI Sbjct: 3638 MLNHTI 3643>NP_563615 Length = 775 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VGAMMNHTI 9 +G MNH+I Sbjct: 150 LGLQMNHSI 158>NP_071417 Length = 398 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GAMMNHT 8 GA+ NHT Sbjct: 326 GALKNHT 332>XP_006714202 Length = 4588 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MMNHTI 9 M+NHTI Sbjct: 3638 MLNHTI 3643>XP_005262892 Length = 4600 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MMNHTI 9 M+NHTI Sbjct: 3638 MLNHTI 3643>XP_005262891 Length = 4600 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MMNHTI 9 M+NHTI Sbjct: 3638 MLNHTI 3643>NP_003213 Length = 450 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VGAMMNHT 8 VGA+MN T Sbjct: 214 VGAVMNPT 221>NP_878314 Length = 361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GAMMNHTI 9 GAM+ H+I Sbjct: 223 GAMVRHSI 230>NP_665735 Length = 155 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGAMMNHTI 9 VGA + HTI Sbjct: 111 VGARIYHTI 119>NP_665734 Length = 155 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGAMMNHTI 9 VGA + HTI Sbjct: 111 VGARIYHTI 119>NP_665707 Length = 155 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGAMMNHTI 9 VGA + HTI Sbjct: 111 VGARIYHTI 119>NP_055160 Length = 2279 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VGAMMNHT 8 VGA+ +HT Sbjct: 2266 VGAIQDHT 2273>NP_001247440 Length = 155 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGAMMNHTI 9 VGA + HTI Sbjct: 111 VGARIYHTI 119>NP_064696 Length = 155 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VGAMMNHTI 9 VGA + HTI Sbjct: 111 VGARIYHTI 119>NP_733751 Length = 4911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VG+++ HTI Sbjct: 4550 VGSLIFHTI 4558>XP_006716142 Length = 4927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VG+++ HTI Sbjct: 4566 VGSLIFHTI 4574>XP_005250088 Length = 4928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VG+++ HTI Sbjct: 4567 VGSLIFHTI 4575>XP_006716141 Length = 4959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VG+++ HTI Sbjct: 4598 VGSLIFHTI 4606>XP_005250085 Length = 4979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VG+++ HTI Sbjct: 4622 VGSLIFHTI 4630>XP_006716140 Length = 4982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VG+++ HTI Sbjct: 4621 VGSLIFHTI 4629>XP_005250084 Length = 4982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VG+++ HTI Sbjct: 4621 VGSLIFHTI 4629>XP_005250083 Length = 4982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VG+++ HTI Sbjct: 4621 VGSLIFHTI 4629>XP_005250082 Length = 4983 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VGAMMNHTI 9 VG+++ HTI Sbjct: 4622 VGSLIFHTI 4630Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.130 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 455,736 Number of extensions: 566 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |