Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1482 XP_006716142 18 1482 XP_005250088 18 1482 XP_006716141 18 1482 XP_005250085 18 1482 XP_006716140 18 1482 XP_005250084 18 1482 XP_005250083 18 1482 XP_005250082 18 1482 NP_758859 16 5631 NP_071900 16 5631 XP_005266019 16 5631 XP_005266018 16 5631 XP_005266017 16 5631 XP_006714965 16 5631 XP_006714964 16 5631 XP_005266016 16 5631 NP_002045 16 7355 NP_579878 16 7355 NP_579890 16 7355 NP_579877 16 7355 NP_001035889 16 7355 NP_689775 16 7355 NP_036345 16 7355 XP_005273475 16 7355 XP_006716359 16 7355 XP_006716358 16 7355 XP_006716357 16 7355 XP_006713978 16 7355 XP_005248059 16 7355 XP_005248058 16 7355 NP_001971 15 9605 NP_919337 15 9605 NP_002636 15 9605 NP_004410 15 9605 XP_006719339 15 9605 XP_005253614 15 9605 XP_005253613 15 9605 XP_005253037 15 9605 XP_005253036 15 9605 XP_005253035 15 9605 XP_005253034 15 9605>NP_733751 Length = 4911 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VFTADISSN 9 V TADISSN Sbjct: 924 VSTADISSN 932>XP_006716142 Length = 4927 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VFTADISSN 9 V TADISSN Sbjct: 925 VSTADISSN 933>XP_005250088 Length = 4928 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VFTADISSN 9 V TADISSN Sbjct: 925 VSTADISSN 933>XP_006716141 Length = 4959 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VFTADISSN 9 V TADISSN Sbjct: 925 VSTADISSN 933>XP_005250085 Length = 4979 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VFTADISSN 9 V TADISSN Sbjct: 925 VSTADISSN 933>XP_006716140 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VFTADISSN 9 V TADISSN Sbjct: 925 VSTADISSN 933>XP_005250084 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VFTADISSN 9 V TADISSN Sbjct: 925 VSTADISSN 933>XP_005250083 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VFTADISSN 9 V TADISSN Sbjct: 924 VSTADISSN 932>XP_005250082 Length = 4983 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VFTADISSN 9 V TADISSN Sbjct: 925 VSTADISSN 933>NP_758859 Length = 2427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 +FTAD+S Sbjct: 1615 IFTADLS 1621>NP_071900 Length = 2696 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 +FTAD+S Sbjct: 1884 IFTADLS 1890>XP_005266019 Length = 1194 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 +FTAD+S Sbjct: 382 IFTADLS 388>XP_005266018 Length = 2427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 +FTAD+S Sbjct: 1615 IFTADLS 1621>XP_005266017 Length = 2427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 +FTAD+S Sbjct: 1615 IFTADLS 1621>XP_006714965 Length = 2427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 +FTAD+S Sbjct: 1615 IFTADLS 1621>XP_006714964 Length = 2696 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 +FTAD+S Sbjct: 1884 IFTADLS 1890>XP_005266016 Length = 2696 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 +FTAD+S Sbjct: 1884 IFTADLS 1890>NP_002045 Length = 180 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FTADISS 8 FT+D+SS Sbjct: 103 FTSDVSS 109>NP_579878 Length = 1365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 ++TADIS Sbjct: 1005 IYTADIS 1011>NP_579890 Length = 1365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 ++TADIS Sbjct: 1005 IYTADIS 1011>NP_579877 Length = 1365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 ++TADIS Sbjct: 1005 IYTADIS 1011>NP_001035889 Length = 1365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 ++TADIS Sbjct: 1005 IYTADIS 1011>NP_689775 Length = 1023 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FTADISSN 9 FTA++SS+ Sbjct: 295 FTAEVSSD 302>NP_036345 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TADISSN 9 T DISSN Sbjct: 258 TGDISSN 264>XP_005273475 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FTADISSN 9 FTA++SS+ Sbjct: 295 FTAEVSSD 302>XP_006716359 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FTADISSN 9 FTA++SS+ Sbjct: 300 FTAEVSSD 307>XP_006716358 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FTADISSN 9 FTA++SS+ Sbjct: 300 FTAEVSSD 307>XP_006716357 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FTADISSN 9 FTA++SS+ Sbjct: 300 FTAEVSSD 307>XP_006713978 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 ++TADIS Sbjct: 224 IYTADIS 230>XP_005248059 Length = 1296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 ++TADIS Sbjct: 936 IYTADIS 942>XP_005248058 Length = 1365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFTADIS 7 ++TADIS Sbjct: 1005 IYTADIS 1011>NP_001971 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VFTADISSN 9 +FT+DI S+ Sbjct: 175 IFTSDIISD 183>NP_919337 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VFTADISSN 9 +FT+DI S+ Sbjct: 175 IFTSDIISD 183>NP_002636 Length = 1686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FTADISS 8 FT D+SS Sbjct: 439 FTCDVSS 445>NP_004410 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TADISSN 9 TADISS+ Sbjct: 235 TADISSH 241>XP_006719339 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VFTADISSN 9 +FT+DI S+ Sbjct: 147 IFTSDIISD 155>XP_005253614 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VFTADISSN 9 +FT+DI S+ Sbjct: 175 IFTSDIISD 183>XP_005253613 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VFTADISSN 9 +FT+DI S+ Sbjct: 175 IFTSDIISD 183>XP_005253037 Length = 1306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FTADISS 8 FT D+SS Sbjct: 59 FTCDVSS 65>XP_005253036 Length = 1686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FTADISS 8 FT D+SS Sbjct: 439 FTCDVSS 445>XP_005253035 Length = 1686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FTADISS 8 FT D+SS Sbjct: 439 FTCDVSS 445>XP_005253034 Length = 1686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FTADISS 8 FT D+SS Sbjct: 439 FTCDVSS 445Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.121 0.308 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 362,433 Number of extensions: 460 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |